RNA–Protein interactions for RNA: ENST00000567648.1

VAC14-209, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-209ENST00000567648 ZNF827Q17R98 1081 aa23.79■■□□□ 1.4
VAC14-209ENST00000567648 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
VAC14-209ENST00000567648 KCNQ4P56696 695 aa23.78■■□□□ 1.4
VAC14-209ENST00000567648 PKD1L3Q7Z443 1732 aa23.77■■□□□ 1.4
VAC14-209ENST00000567648 TIMELESSQ9UNS1 1208 aa23.77■■□□□ 1.4
VAC14-209ENST00000567648 SLC15A2Q16348 729 aa23.76■■□□□ 1.39
VAC14-209ENST00000567648 SPON1Q9HCB6 807 aa23.76■■□□□ 1.39
VAC14-209ENST00000567648 INSRP06213 1382 aa23.76■■□□□ 1.39
VAC14-209ENST00000567648 POLR3GLQ9BT43 218 aa23.75■■□□□ 1.39
VAC14-209ENST00000567648 FLT4P35916 1363 aa23.75■■□□□ 1.39
VAC14-209ENST00000567648 QSER1Q2KHR3 1735 aa23.74■■□□□ 1.39
VAC14-209ENST00000567648 HSPA5P11021 654 aaKnown RBP23.74■■□□□ 1.39
VAC14-209ENST00000567648 PTGER2P43116 358 aa23.74■■□□□ 1.39
VAC14-209ENST00000567648 ITGB4P16144 1822 aa23.74■■□□□ 1.39
VAC14-209ENST00000567648 CDCA8Q53HL2 280 aa23.73■■□□□ 1.39
VAC14-209ENST00000567648 ATF5Q9Y2D1 282 aaPredicted RBP23.73■■□□□ 1.39
VAC14-209ENST00000567648 PRIM1P49642 420 aaKnown RBP23.72■■□□□ 1.39
VAC14-209ENST00000567648 ZCRB1Q8TBF4 217 aaKnown RBP23.72■■□□□ 1.39
VAC14-209ENST00000567648 STK32BQ9NY57 414 aa23.72■■□□□ 1.39
VAC14-209ENST00000567648 UTRNP46939 3433 aa23.72■■□□□ 1.39
VAC14-209ENST00000567648 NCAPD2Q15021 1401 aa23.71■■□□□ 1.39
VAC14-209ENST00000567648 SMG6Q86US8 1419 aaKnown RBP23.7■■□□□ 1.38
VAC14-209ENST00000567648 SYTL4Q96C24 671 aaPredicted RBP23.7■■□□□ 1.38
VAC14-209ENST00000567648 CCER1Q8TC90 406 aaPredicted RBP23.69■■□□□ 1.38
VAC14-209ENST00000567648 COL24A1Q17RW2 1714 aa23.68■■□□□ 1.38
VAC14-209ENST00000567648 SGIP1Q9BQI5 828 aa23.68■■□□□ 1.38
VAC14-209ENST00000567648 TAF1LQ8IZX4 1826 aa23.68■■□□□ 1.38
VAC14-209ENST00000567648 PPP1R1BQ9UD71 204 aaPredicted RBP23.67■■□□□ 1.38
VAC14-209ENST00000567648 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
VAC14-209ENST00000567648 AKT1S1Q96B36 256 aa23.66■■□□□ 1.38
VAC14-209ENST00000567648 C5P01031 1676 aa23.66■■□□□ 1.38
VAC14-209ENST00000567648 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
VAC14-209ENST00000567648 CYP27B1O15528 508 aa23.64■■□□□ 1.37
VAC14-209ENST00000567648 TNNT2P45379 298 aaPredicted RBP23.64■■□□□ 1.37
VAC14-209ENST00000567648 POLKQ9UBT6 870 aa23.64■■□□□ 1.37
VAC14-209ENST00000567648 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.37
VAC14-209ENST00000567648 RAPGEF4Q8WZA2 1011 aa23.63■■□□□ 1.37
VAC14-209ENST00000567648 CGNL1Q0VF96 1302 aa23.62■■□□□ 1.37
VAC14-209ENST00000567648 TATP17735 454 aaPredicted RBP23.62■■□□□ 1.37
VAC14-209ENST00000567648 PNPLA7Q6ZV29 1317 aa23.61■■□□□ 1.37
VAC14-209ENST00000567648 EYA1Q99502 592 aa23.61■■□□□ 1.37
VAC14-209ENST00000567648 PANK3Q9H999 370 aa23.61■■□□□ 1.37
VAC14-209ENST00000567648 WASHC2AQ641Q2 1341 aa23.6■■□□□ 1.37
VAC14-209ENST00000567648 MTFR1LQ9H019 292 aa23.6■■□□□ 1.37
VAC14-209ENST00000567648 PCDH11XQ9BZA7 1347 aa23.59■■□□□ 1.37
VAC14-209ENST00000567648 PCDH11YQ9BZA8 1340 aa23.59■■□□□ 1.37
VAC14-209ENST00000567648 FHDC1Q9C0D6 1143 aaPredicted RBP23.58■■□□□ 1.37
VAC14-209ENST00000567648 EIF4A2Q14240 407 aaKnown RBP23.57■■□□□ 1.36
VAC14-209ENST00000567648 SLC27A3Q5K4L6 730 aa23.57■■□□□ 1.36
VAC14-209ENST00000567648 GOLGB1Q14789 3259 aaKnown RBP23.57■■□□□ 1.36
VAC14-209ENST00000567648 AMIGO3Q86WK7 504 aa23.55■■□□□ 1.36
VAC14-209ENST00000567648 CCNL1Q9UK58 526 aaPredicted RBP23.55■■□□□ 1.36
VAC14-209ENST00000567648 C4BP0C0L5 1744 aa23.54■■□□□ 1.36
VAC14-209ENST00000567648 MPRIPQ6WCQ1 1025 aa23.53■■□□□ 1.36
VAC14-209ENST00000567648 SYT17Q9BSW7 474 aa23.53■■□□□ 1.36
VAC14-209ENST00000567648 UBR3Q6ZT12 1888 aa23.53■■□□□ 1.36
VAC14-209ENST00000567648 PALLDQ8WX93 1383 aa23.52■■□□□ 1.36
VAC14-209ENST00000567648 SMIM5Q71RC9 77 aa23.52■■□□□ 1.36
VAC14-209ENST00000567648 TFCP2L1Q9NZI6 479 aa23.5■■□□□ 1.35
VAC14-209ENST00000567648 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
VAC14-209ENST00000567648 COL23A1Q86Y22 540 aaPredicted RBP23.49■■□□□ 1.35
VAC14-209ENST00000567648 PIGBQ92521 554 aa23.49■■□□□ 1.35
VAC14-209ENST00000567648 ARXQ96QS3 562 aa23.49■■□□□ 1.35
VAC14-209ENST00000567648 IGSF1Q8N6C5 1336 aa23.48■■□□□ 1.35
VAC14-209ENST00000567648 NKX1-1Q15270 411 aaPredicted RBP23.47■■□□□ 1.35
VAC14-209ENST00000567648 PHKG2P15735 406 aa23.46■■□□□ 1.35
VAC14-209ENST00000567648 YY1P25490 414 aa23.46■■□□□ 1.35
VAC14-209ENST00000567648 AEBP1Q8IUX7 1158 aa23.46■■□□□ 1.35
VAC14-209ENST00000567648 MSL1Q68DK7 614 aa23.45■■□□□ 1.34
VAC14-209ENST00000567648 KDM6AO15550 1401 aaPredicted RBP23.44■■□□□ 1.34
VAC14-209ENST00000567648 MAP3K5Q99683 1374 aa23.43■■□□□ 1.34
VAC14-209ENST00000567648 VIRMAQ69YN4 1812 aaKnown RBP23.43■■□□□ 1.34
VAC14-209ENST00000567648 AMER1Q5JTC6 1135 aaPredicted RBP23.43■■□□□ 1.34
VAC14-209ENST00000567648 NLGN2Q8NFZ4 835 aa23.43■■□□□ 1.34
VAC14-209ENST00000567648 CHD4Q14839 1912 aa23.43■■□□□ 1.34
VAC14-209ENST00000567648 ASAP1Q9ULH1 1129 aa23.42■■□□□ 1.34
VAC14-209ENST00000567648 SPG7Q9UQ90 795 aa23.42■■□□□ 1.34
VAC14-209ENST00000567648 KLHL34Q8N239 644 aa23.41■■□□□ 1.34
VAC14-209ENST00000567648 LINC00116Q8NCU8 138 aa23.41■■□□□ 1.34
VAC14-209ENST00000567648 COL5A3P25940 1745 aaPredicted RBP23.41■■□□□ 1.34
VAC14-209ENST00000567648 ITPK1Q13572 414 aa23.4■■□□□ 1.34
VAC14-209ENST00000567648 MORC1Q86VD1 984 aa23.4■■□□□ 1.34
VAC14-209ENST00000567648 SLC16A10Q8TF71 515 aa23.4■■□□□ 1.34
VAC14-209ENST00000567648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
VAC14-209ENST00000567648 MSH5O43196 834 aa23.38■■□□□ 1.33
VAC14-209ENST00000567648 IFNL2Q8IZJ0 200 aa23.38■■□□□ 1.33
VAC14-209ENST00000567648 KDRP35968 1356 aa23.38■■□□□ 1.33
VAC14-209ENST00000567648 SCN11AQ9UI33 1791 aa23.37■■□□□ 1.33
VAC14-209ENST00000567648 SLC4A9Q96Q91 983 aa23.37■■□□□ 1.33
VAC14-209ENST00000567648 ATG3Q9NT62 314 aa23.37■■□□□ 1.33
VAC14-209ENST00000567648 LOC102724428A0A0B4J2F2 783 aa23.36■■□□□ 1.33
VAC14-209ENST00000567648 SIK1P57059 783 aa23.36■■□□□ 1.33
VAC14-209ENST00000567648 TMOD3Q9NYL9 352 aa23.36■■□□□ 1.33
VAC14-209ENST00000567648 MYH14Q7Z406 1995 aaKnown RBP23.36■■□□□ 1.33
VAC14-209ENST00000567648 PER1O15534 1290 aaPredicted RBP23.35■■□□□ 1.33
VAC14-209ENST00000567648 PHF14O94880 888 aa23.35■■□□□ 1.33
VAC14-209ENST00000567648 IL13P35225 146 aa23.35■■□□□ 1.33
VAC14-209ENST00000567648 KNSTRNQ9Y448 316 aa23.35■■□□□ 1.33
VAC14-209ENST00000567648 TJP1Q07157 1748 aa23.34■■□□□ 1.33
VAC14-209ENST00000567648 C4AP0C0L4 1744 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms