RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 PAPPAQ13219 1627 aa38.38■■■■□ 3.73
UBFD1-206ENST00000566669 PTGER2P43116 358 aa38.37■■■■□ 3.73
UBFD1-206ENST00000566669 MEGF6O75095 1541 aa38.37■■■■□ 3.73
UBFD1-206ENST00000566669 NSD3Q9BZ95 1437 aa38.36■■■■□ 3.73
UBFD1-206ENST00000566669 TATP17735 454 aaPredicted RBP38.35■■■■□ 3.73
UBFD1-206ENST00000566669 SYTL4Q96C24 671 aaPredicted RBP38.35■■■■□ 3.73
UBFD1-206ENST00000566669 CARD14Q9BXL6 1004 aa38.35■■■■□ 3.73
UBFD1-206ENST00000566669 PRIM1P49642 420 aaKnown RBP38.34■■■■□ 3.73
UBFD1-206ENST00000566669 ATF5Q9Y2D1 282 aaPredicted RBP38.33■■■■□ 3.73
UBFD1-206ENST00000566669 HSP90AB2PQ58FF8 381 aa38.32■■■■□ 3.72
UBFD1-206ENST00000566669 LRRC4BQ9NT99 713 aa38.32■■■■□ 3.72
UBFD1-206ENST00000566669 MYOM1P52179 1685 aa38.32■■■■□ 3.72
UBFD1-206ENST00000566669 SLC16A10Q8TF71 515 aa38.31■■■■□ 3.72
UBFD1-206ENST00000566669 PCDH11XQ9BZA7 1347 aa38.3■■■■□ 3.72
UBFD1-206ENST00000566669 PCDH11YQ9BZA8 1340 aa38.3■■■■□ 3.72
UBFD1-206ENST00000566669 RGPD2P0DJD1 1756 aa38.29■■■■□ 3.72
UBFD1-206ENST00000566669 AKT1S1Q96B36 256 aa38.27■■■■□ 3.72
UBFD1-206ENST00000566669 ZNF827Q17R98 1081 aa38.26■■■■□ 3.72
UBFD1-206ENST00000566669 SGIP1Q9BQI5 828 aa38.26■■■■□ 3.72
UBFD1-206ENST00000566669 NSD2O96028 1365 aa38.25■■■■□ 3.71
UBFD1-206ENST00000566669 USHBP1Q8N6Y0 703 aa38.25■■■■□ 3.71
UBFD1-206ENST00000566669 DOT1LQ8TEK3 1739 aa38.25■■■■□ 3.71
UBFD1-206ENST00000566669 SHANK3Q9BYB0 1731 aa38.25■■■■□ 3.71
UBFD1-206ENST00000566669 YY1P25490 414 aa38.23■■■■□ 3.71
UBFD1-206ENST00000566669 EIF4G2P78344 907 aaKnown RBP eCLIP38.23■■■■□ 3.71
UBFD1-206ENST00000566669 WASHC2AQ641Q2 1341 aa38.21■■■■□ 3.71
UBFD1-206ENST00000566669 ARXQ96QS3 562 aa38.21■■■■□ 3.71
UBFD1-206ENST00000566669 EMILIN1Q9Y6C2 1016 aa38.21■■■■□ 3.71
UBFD1-206ENST00000566669 FHDC1Q9C0D6 1143 aaPredicted RBP38.2■■■■□ 3.71
UBFD1-206ENST00000566669 TFCP2L1Q9NZI6 479 aa38.2■■■■□ 3.71
UBFD1-206ENST00000566669 QSER1Q2KHR3 1735 aa38.2■■■■□ 3.71
UBFD1-206ENST00000566669 MAP3K5Q99683 1374 aa38.19■■■■□ 3.7
UBFD1-206ENST00000566669 SYT17Q9BSW7 474 aa38.19■■■■□ 3.7
UBFD1-206ENST00000566669 CCNL1Q9UK58 526 aaPredicted RBP38.18■■■■□ 3.7
UBFD1-206ENST00000566669 LY75O60449 1722 aa38.18■■■■□ 3.7
UBFD1-206ENST00000566669 NCAPD2Q15021 1401 aa38.17■■■■□ 3.7
UBFD1-206ENST00000566669 PPM1GO15355 546 aaPredicted RBP38.16■■■■□ 3.7
UBFD1-206ENST00000566669 POLD1P28340 1107 aa38.15■■■■□ 3.7
UBFD1-206ENST00000566669 ANKRD26Q9UPS8 1709 aa38.15■■■■□ 3.7
UBFD1-206ENST00000566669 SPG7Q9UQ90 795 aa38.14■■■■□ 3.7
UBFD1-206ENST00000566669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.13■■■■□ 3.69
UBFD1-206ENST00000566669 PNPLA7Q6ZV29 1317 aa38.12■■■■□ 3.69
UBFD1-206ENST00000566669 PLEKHG2Q9H7P9 1386 aa38.12■■■■□ 3.69
UBFD1-206ENST00000566669 CCER1Q8TC90 406 aaPredicted RBP38.11■■■■□ 3.69
UBFD1-206ENST00000566669 POLR3GLQ9BT43 218 aa38.11■■■■□ 3.69
UBFD1-206ENST00000566669 CYP27B1O15528 508 aa38.09■■■■□ 3.69
UBFD1-206ENST00000566669 SMARCC1Q92922 1105 aaPredicted RBP38.09■■■■□ 3.69
UBFD1-206ENST00000566669 POLKQ9UBT6 870 aa38.09■■■■□ 3.69
UBFD1-206ENST00000566669 NKX1-1Q15270 411 aaPredicted RBP38.07■■■■□ 3.68
UBFD1-206ENST00000566669 HSPA5P11021 654 aaKnown RBP38.06■■■■□ 3.68
UBFD1-206ENST00000566669 PKD1L3Q7Z443 1732 aa38.06■■■■□ 3.68
UBFD1-206ENST00000566669 KCNQ4P56696 695 aa38.05■■■■□ 3.68
UBFD1-206ENST00000566669 FLAD1Q8NFF5 587 aa38.05■■■■□ 3.68
UBFD1-206ENST00000566669 MPRIPQ6WCQ1 1025 aa38.04■■■■□ 3.68
UBFD1-206ENST00000566669 EYA1Q99502 592 aa38.04■■■■□ 3.68
UBFD1-206ENST00000566669 PALLDQ8WX93 1383 aa38.04■■■■□ 3.68
UBFD1-206ENST00000566669 MAP2P11137 1827 aaKnown RBP38.02■■■■□ 3.68
UBFD1-206ENST00000566669 COL24A1Q17RW2 1714 aa38■■■■□ 3.67
UBFD1-206ENST00000566669 PANK3Q9H999 370 aa37.99■■■■□ 3.67
UBFD1-206ENST00000566669 IFNL2Q8IZJ0 200 aa37.97■■■■□ 3.67
UBFD1-206ENST00000566669 MSH5O43196 834 aa37.95■■■■□ 3.67
UBFD1-206ENST00000566669 EIF4A2Q14240 407 aaKnown RBP37.95■■■■□ 3.67
UBFD1-206ENST00000566669 TUBGCP6Q96RT7 1819 aa37.94■■■■□ 3.66
UBFD1-206ENST00000566669 TNNT2P45379 298 aaPredicted RBP37.93■■■■□ 3.66
UBFD1-206ENST00000566669 COL23A1Q86Y22 540 aaPredicted RBP37.93■■■■□ 3.66
UBFD1-206ENST00000566669 C5P01031 1676 aa37.92■■■■□ 3.66
UBFD1-206ENST00000566669 PIGBQ92521 554 aa37.92■■■■□ 3.66
UBFD1-206ENST00000566669 TMOD3Q9NYL9 352 aa37.92■■■■□ 3.66
UBFD1-206ENST00000566669 PHKG2P15735 406 aa37.9■■■■□ 3.66
UBFD1-206ENST00000566669 IGSF1Q8N6C5 1336 aa37.89■■■■□ 3.66
UBFD1-206ENST00000566669 TOGARAM1Q9Y4F4 1720 aa37.89■■■■□ 3.66
UBFD1-206ENST00000566669 AK7Q96M32 723 aa37.88■■■■□ 3.65
UBFD1-206ENST00000566669 ITGB4P16144 1822 aa37.88■■■■□ 3.65
UBFD1-206ENST00000566669 HSP90AB1P08238 724 aaKnown RBP37.87■■■■□ 3.65
UBFD1-206ENST00000566669 GPR162Q16538 588 aa37.87■■■■□ 3.65
UBFD1-206ENST00000566669 KLHL34Q8N239 644 aa37.87■■■■□ 3.65
UBFD1-206ENST00000566669 KNSTRNQ9Y448 316 aa37.87■■■■□ 3.65
UBFD1-206ENST00000566669 MORC1Q86VD1 984 aa37.86■■■■□ 3.65
UBFD1-206ENST00000566669 LOC102724428A0A0B4J2F2 783 aa37.83■■■■□ 3.65
UBFD1-206ENST00000566669 SIK1P57059 783 aa37.83■■■■□ 3.65
UBFD1-206ENST00000566669 TAF1LQ8IZX4 1826 aa37.82■■■■□ 3.65
UBFD1-206ENST00000566669 AMOTQ4VCS5 1084 aa37.82■■■■□ 3.64
UBFD1-206ENST00000566669 PLEKHO1Q53GL0 409 aaPredicted RBP37.82■■■■□ 3.64
UBFD1-206ENST00000566669 C4BP0C0L5 1744 aa37.81■■■■□ 3.64
UBFD1-206ENST00000566669 ERVV-2B6SEH9 535 aa37.8■■■■□ 3.64
UBFD1-206ENST00000566669 UTRNP46939 3433 aa37.8■■■■□ 3.64
UBFD1-206ENST00000566669 SSFA2P28290 1259 aa37.79■■■■□ 3.64
UBFD1-206ENST00000566669 DCAF5Q96JK2 942 aa37.79■■■■□ 3.64
UBFD1-206ENST00000566669 CHD4Q14839 1912 aa37.78■■■■□ 3.64
UBFD1-206ENST00000566669 CD2APQ9Y5K6 639 aa37.77■■■■□ 3.64
UBFD1-206ENST00000566669 ZNF784Q8NCA9 323 aaPredicted RBP37.75■■■■□ 3.63
UBFD1-206ENST00000566669 GRIN3BO60391 1043 aa37.74■■■■□ 3.63
UBFD1-206ENST00000566669 ASAP1Q9ULH1 1129 aa37.74■■■■□ 3.63
UBFD1-206ENST00000566669 MSL1Q68DK7 614 aa37.73■■■■□ 3.63
UBFD1-206ENST00000566669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.72■■■■□ 3.63
UBFD1-206ENST00000566669 ATP6V1AP38606 617 aa37.72■■■■□ 3.63
UBFD1-206ENST00000566669 ATG3Q9NT62 314 aa37.72■■■■□ 3.63
UBFD1-206ENST00000566669 NLGN2Q8NFZ4 835 aa37.71■■■■□ 3.63
UBFD1-206ENST00000566669 ZNF530Q6P9A1 599 aaPredicted RBP37.69■■■■□ 3.62
UBFD1-206ENST00000566669 PELP1Q8IZL8 1130 aaKnown RBP37.69■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms