RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 RTL1A6NKG5 1358 aa16.63■□□□□ 0.25
UBR1-206ENST00000566493 CAPN15O75808 1086 aa16.62■□□□□ 0.25
UBR1-206ENST00000566493 RRS1Q15050 365 aaKnown RBP16.62■□□□□ 0.25
UBR1-206ENST00000566493 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
UBR1-206ENST00000566493 SMG6Q86US8 1419 aaKnown RBP16.62■□□□□ 0.25
UBR1-206ENST00000566493 ZCRB1Q8TBF4 217 aaKnown RBP16.61■□□□□ 0.25
UBR1-206ENST00000566493 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
UBR1-206ENST00000566493 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
UBR1-206ENST00000566493 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
UBR1-206ENST00000566493 SYTL4Q96C24 671 aaPredicted RBP16.6■□□□□ 0.25
UBR1-206ENST00000566493 KIF20BQ96Q89 1820 aa16.6■□□□□ 0.25
UBR1-206ENST00000566493 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.24
UBR1-206ENST00000566493 MTFR1LQ9H019 292 aa16.58■□□□□ 0.24
UBR1-206ENST00000566493 CLSPNQ9HAW4 1339 aa16.58■□□□□ 0.24
UBR1-206ENST00000566493 CGNL1Q0VF96 1302 aa16.57■□□□□ 0.24
UBR1-206ENST00000566493 PRIM1P49642 420 aaKnown RBP16.57■□□□□ 0.24
UBR1-206ENST00000566493 SLC27A3Q5K4L6 730 aa16.57■□□□□ 0.24
UBR1-206ENST00000566493 NBPF6Q5VWK0 638 aa16.57■□□□□ 0.24
UBR1-206ENST00000566493 NBPF4Q96M43 638 aa16.57■□□□□ 0.24
UBR1-206ENST00000566493 PTGER2P43116 358 aa16.56■□□□□ 0.24
UBR1-206ENST00000566493 USHBP1Q8N6Y0 703 aa16.56■□□□□ 0.24
UBR1-206ENST00000566493 MYOM1P52179 1685 aa16.56■□□□□ 0.24
UBR1-206ENST00000566493 MEGF6O75095 1541 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 INSRP06213 1382 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 FLT4P35916 1363 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 KIF24Q5T7B8 1368 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
UBR1-206ENST00000566493 YY1P25490 414 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 PAPPAQ13219 1627 aa16.55■□□□□ 0.24
UBR1-206ENST00000566493 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
UBR1-206ENST00000566493 ZNF827Q17R98 1081 aa16.54■□□□□ 0.24
UBR1-206ENST00000566493 CARD14Q9BXL6 1004 aa16.54■□□□□ 0.24
UBR1-206ENST00000566493 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
UBR1-206ENST00000566493 SHANK3Q9BYB0 1731 aa16.53■□□□□ 0.24
UBR1-206ENST00000566493 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
UBR1-206ENST00000566493 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.24
UBR1-206ENST00000566493 MYCNP04198 464 aaPredicted RBP16.52■□□□□ 0.24
UBR1-206ENST00000566493 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
UBR1-206ENST00000566493 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
UBR1-206ENST00000566493 ARXQ96QS3 562 aa16.51■□□□□ 0.23
UBR1-206ENST00000566493 TFCP2L1Q9NZI6 479 aa16.51■□□□□ 0.23
UBR1-206ENST00000566493 PCDH11XQ9BZA7 1347 aa16.5■□□□□ 0.23
UBR1-206ENST00000566493 PCDH11YQ9BZA8 1340 aa16.5■□□□□ 0.23
UBR1-206ENST00000566493 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
UBR1-206ENST00000566493 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
UBR1-206ENST00000566493 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
UBR1-206ENST00000566493 LY75O60449 1722 aa16.5■□□□□ 0.23
UBR1-206ENST00000566493 NSD2O96028 1365 aa16.5■□□□□ 0.23
UBR1-206ENST00000566493 KCNQ4P56696 695 aa16.49■□□□□ 0.23
UBR1-206ENST00000566493 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
UBR1-206ENST00000566493 SGIP1Q9BQI5 828 aa16.49■□□□□ 0.23
UBR1-206ENST00000566493 CCNL1Q9UK58 526 aaPredicted RBP16.49■□□□□ 0.23
UBR1-206ENST00000566493 HMGB2P26583 209 aaKnown RBP16.47■□□□□ 0.23
UBR1-206ENST00000566493 POLD1P28340 1107 aa16.47■□□□□ 0.23
UBR1-206ENST00000566493 EIF4G2P78344 907 aaKnown RBP eCLIP16.47■□□□□ 0.23
UBR1-206ENST00000566493 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
UBR1-206ENST00000566493 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
UBR1-206ENST00000566493 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
UBR1-206ENST00000566493 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.23
UBR1-206ENST00000566493 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
UBR1-206ENST00000566493 ZBTB22O15209 634 aa16.45■□□□□ 0.22
UBR1-206ENST00000566493 MPRIPQ6WCQ1 1025 aa16.45■□□□□ 0.22
UBR1-206ENST00000566493 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
UBR1-206ENST00000566493 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
UBR1-206ENST00000566493 TUBGCP6Q96RT7 1819 aa16.44■□□□□ 0.22
UBR1-206ENST00000566493 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
UBR1-206ENST00000566493 CYP27B1O15528 508 aa16.43■□□□□ 0.22
UBR1-206ENST00000566493 MAP3K5Q99683 1374 aa16.42■□□□□ 0.22
UBR1-206ENST00000566493 HSPA5P11021 654 aaKnown RBP16.42■□□□□ 0.22
UBR1-206ENST00000566493 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
UBR1-206ENST00000566493 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
UBR1-206ENST00000566493 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
UBR1-206ENST00000566493 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
UBR1-206ENST00000566493 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
UBR1-206ENST00000566493 EYA1Q99502 592 aa16.41■□□□□ 0.22
UBR1-206ENST00000566493 ITGB4P16144 1822 aa16.4■□□□□ 0.22
UBR1-206ENST00000566493 NCAPD2Q15021 1401 aa16.4■□□□□ 0.22
UBR1-206ENST00000566493 PANK3Q9H999 370 aa16.4■□□□□ 0.22
UBR1-206ENST00000566493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.4■□□□□ 0.22
UBR1-206ENST00000566493 C5P01031 1676 aa16.4■□□□□ 0.22
UBR1-206ENST00000566493 COL24A1Q17RW2 1714 aa16.39■□□□□ 0.21
UBR1-206ENST00000566493 DSG3P32926 999 aa16.39■□□□□ 0.21
UBR1-206ENST00000566493 NKX1-1Q15270 411 aaPredicted RBP16.39■□□□□ 0.21
UBR1-206ENST00000566493 GPR162Q16538 588 aa16.39■□□□□ 0.21
UBR1-206ENST00000566493 COL23A1Q86Y22 540 aaPredicted RBP16.39■□□□□ 0.21
UBR1-206ENST00000566493 FLAD1Q8NFF5 587 aa16.39■□□□□ 0.21
UBR1-206ENST00000566493 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
UBR1-206ENST00000566493 TOGARAM1Q9Y4F4 1720 aa16.38■□□□□ 0.21
UBR1-206ENST00000566493 EIF4A2Q14240 407 aaKnown RBP16.37■□□□□ 0.21
UBR1-206ENST00000566493 PIGBQ92521 554 aa16.37■□□□□ 0.21
UBR1-206ENST00000566493 TMOD3Q9NYL9 352 aa16.37■□□□□ 0.21
UBR1-206ENST00000566493 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
UBR1-206ENST00000566493 CHD4Q14839 1912 aa16.37■□□□□ 0.21
UBR1-206ENST00000566493 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
UBR1-206ENST00000566493 AK7Q96M32 723 aa16.36■□□□□ 0.21
UBR1-206ENST00000566493 PHKG2P15735 406 aa16.35■□□□□ 0.21
UBR1-206ENST00000566493 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms