RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 RXRBP28702 533 aa10.99□□□□□ -0.65
CDH13-208ENST00000566333 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
CDH13-208ENST00000566333 CFAP53Q96M91 514 aa10.99□□□□□ -0.65
CDH13-208ENST00000566333 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
CDH13-208ENST00000566333 IL2RBP14784 551 aa10.97□□□□□ -0.65
CDH13-208ENST00000566333 SULT6B1Q6IMI4 303 aa10.96□□□□□ -0.65
CDH13-208ENST00000566333 SEPT12Q8IYM1 358 aa10.96□□□□□ -0.65
CDH13-208ENST00000566333 CDCA7Q9BWT1 371 aaPredicted RBP10.96□□□□□ -0.65
CDH13-208ENST00000566333 RSPH6AQ9H0K4 717 aa10.96□□□□□ -0.65
CDH13-208ENST00000566333 KAT6BQ8WYB5 2073 aa10.96□□□□□ -0.66
CDH13-208ENST00000566333 BTAF1O14981 1849 aa10.95□□□□□ -0.66
CDH13-208ENST00000566333 HMOX1P09601 288 aa10.95□□□□□ -0.66
CDH13-208ENST00000566333 PAPPAQ13219 1627 aa10.95□□□□□ -0.66
CDH13-208ENST00000566333 BCL9O00512 1426 aa10.94□□□□□ -0.66
CDH13-208ENST00000566333 U2SURPO15042 1029 aaKnown RBP10.94□□□□□ -0.66
CDH13-208ENST00000566333 ILDR2Q71H61 639 aa10.94□□□□□ -0.66
CDH13-208ENST00000566333 RAPGEF4Q8WZA2 1011 aa10.94□□□□□ -0.66
CDH13-208ENST00000566333 RGPD3A6NKT7 1758 aaPredicted RBP10.94□□□□□ -0.66
CDH13-208ENST00000566333 RGPD4Q7Z3J3 1758 aa10.94□□□□□ -0.66
CDH13-208ENST00000566333 MRC1P22897 1456 aa10.93□□□□□ -0.66
CDH13-208ENST00000566333 A0A0G2JS52 829 aa10.93□□□□□ -0.66
CDH13-208ENST00000566333 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
CDH13-208ENST00000566333 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDH13-208ENST00000566333 MYT1Q01538 1121 aa10.93□□□□□ -0.66
CDH13-208ENST00000566333 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
CDH13-208ENST00000566333 TATP17735 454 aaPredicted RBP10.92□□□□□ -0.66
CDH13-208ENST00000566333 DDB1Q16531 1140 aa10.92□□□□□ -0.66
CDH13-208ENST00000566333 MIER1Q8N108 512 aa10.92□□□□□ -0.66
CDH13-208ENST00000566333 MRS2Q9HD23 443 aa10.92□□□□□ -0.66
CDH13-208ENST00000566333 NUDCQ9Y266 331 aa10.92□□□□□ -0.66
CDH13-208ENST00000566333 PCDH11XQ9BZA7 1347 aa10.91□□□□□ -0.66
CDH13-208ENST00000566333 PCDH11YQ9BZA8 1340 aa10.91□□□□□ -0.66
CDH13-208ENST00000566333 CYP27B1O15528 508 aa10.91□□□□□ -0.66
CDH13-208ENST00000566333 PRKAR2BP31323 418 aa10.91□□□□□ -0.66
CDH13-208ENST00000566333 KRT27Q7Z3Y8 459 aa10.91□□□□□ -0.66
CDH13-208ENST00000566333 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
CDH13-208ENST00000566333 PNISRQ8TF01 805 aaKnown RBP10.91□□□□□ -0.66
CDH13-208ENST00000566333 PLEKHF1Q96S99 279 aa10.91□□□□□ -0.66
CDH13-208ENST00000566333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDH13-208ENST00000566333 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.66
CDH13-208ENST00000566333 LY75O60449 1722 aa10.9□□□□□ -0.66
CDH13-208ENST00000566333 RREB1Q92766 1687 aa10.9□□□□□ -0.66
CDH13-208ENST00000566333 CCER2I3L3R5 266 aa10.9□□□□□ -0.66
CDH13-208ENST00000566333 FCHSD2O94868 740 aa10.9□□□□□ -0.66
CDH13-208ENST00000566333 FAM182BQ5T319 152 aa10.9□□□□□ -0.66
CDH13-208ENST00000566333 ZCRB1Q8TBF4 217 aaKnown RBP10.9□□□□□ -0.66
CDH13-208ENST00000566333 PHACTR3Q96KR7 559 aa10.9□□□□□ -0.66
CDH13-208ENST00000566333 WDR43Q15061 677 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDH13-208ENST00000566333 ADAMTS8Q9UP79 889 aa10.89□□□□□ -0.67
CDH13-208ENST00000566333 KDM3BQ7LBC6 1761 aa10.89□□□□□ -0.67
CDH13-208ENST00000566333 CICQ96RK0 1608 aaPredicted RBP10.88□□□□□ -0.67
CDH13-208ENST00000566333 EXOC5O00471 708 aa10.88□□□□□ -0.67
CDH13-208ENST00000566333 PHKG2P15735 406 aa10.88□□□□□ -0.67
CDH13-208ENST00000566333 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
CDH13-208ENST00000566333 ZNF530Q6P9A1 599 aaPredicted RBP10.88□□□□□ -0.67
CDH13-208ENST00000566333 SPG7Q9UQ90 795 aa10.88□□□□□ -0.67
CDH13-208ENST00000566333 MAP3K5Q99683 1374 aa10.88□□□□□ -0.67
CDH13-208ENST00000566333 NUP188Q5SRE5 1749 aa10.87□□□□□ -0.67
CDH13-208ENST00000566333 TAF1LQ8IZX4 1826 aa10.87□□□□□ -0.67
CDH13-208ENST00000566333 PDE3BQ13370 1112 aa10.87□□□□□ -0.67
CDH13-208ENST00000566333 NKX1-1Q15270 411 aaPredicted RBP10.87□□□□□ -0.67
CDH13-208ENST00000566333 AMOTQ4VCS5 1084 aa10.87□□□□□ -0.67
CDH13-208ENST00000566333 PLEKHO1Q53GL0 409 aaPredicted RBP10.87□□□□□ -0.67
CDH13-208ENST00000566333 CCDC146Q8IYE0 955 aa10.86□□□□□ -0.67
CDH13-208ENST00000566333 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
CDH13-208ENST00000566333 CEMIPQ8WUJ3 1361 aa10.86□□□□□ -0.67
CDH13-208ENST00000566333 ZNF831Q5JPB2 1677 aa10.85□□□□□ -0.67
CDH13-208ENST00000566333 COL5A3P25940 1745 aaPredicted RBP10.85□□□□□ -0.67
CDH13-208ENST00000566333 PTF1AQ7RTS3 328 aa10.85□□□□□ -0.67
CDH13-208ENST00000566333 IFNL2Q8IZJ0 200 aa10.85□□□□□ -0.67
CDH13-208ENST00000566333 GAS2L2Q8NHY3 880 aa10.85□□□□□ -0.67
CDH13-208ENST00000566333 TJP1Q07157 1748 aa10.84□□□□□ -0.67
CDH13-208ENST00000566333 AKAP4Q5JQC9 854 aa10.84□□□□□ -0.67
CDH13-208ENST00000566333 FAM196AQ6ZSG2 479 aa10.84□□□□□ -0.67
CDH13-208ENST00000566333 RUNDC1Q96C34 613 aa10.84□□□□□ -0.67
CDH13-208ENST00000566333 C5P01031 1676 aa10.84□□□□□ -0.67
CDH13-208ENST00000566333 TUBGCP6Q96RT7 1819 aa10.84□□□□□ -0.67
CDH13-208ENST00000566333 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
CDH13-208ENST00000566333 LAMB4A4D0S4 1761 aa10.83□□□□□ -0.68
CDH13-208ENST00000566333 NFE2L2Q16236 605 aa10.83□□□□□ -0.68
CDH13-208ENST00000566333 C1orf141Q5JVX7 400 aa10.83□□□□□ -0.68
CDH13-208ENST00000566333 KCPQ6ZWJ8 1503 aa10.83□□□□□ -0.68
CDH13-208ENST00000566333 KCNQ2O43526 872 aa10.82□□□□□ -0.68
CDH13-208ENST00000566333 TMPOP42166 694 aaKnown RBP10.82□□□□□ -0.68
CDH13-208ENST00000566333 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
CDH13-208ENST00000566333 ACSBG1Q96GR2 724 aa10.82□□□□□ -0.68
CDH13-208ENST00000566333 DCAF5Q96JK2 942 aa10.82□□□□□ -0.68
CDH13-208ENST00000566333 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
CDH13-208ENST00000566333 RNMTO43148 476 aaKnown RBP10.81□□□□□ -0.68
CDH13-208ENST00000566333 MSH5O43196 834 aa10.81□□□□□ -0.68
CDH13-208ENST00000566333 HSP90AB1P08238 724 aaKnown RBP10.81□□□□□ -0.68
CDH13-208ENST00000566333 MPRIPQ6WCQ1 1025 aa10.81□□□□□ -0.68
CDH13-208ENST00000566333 PNNQ9H307 717 aaKnown RBP10.81□□□□□ -0.68
CDH13-208ENST00000566333 LGR6Q9HBX8 967 aa10.81□□□□□ -0.68
CDH13-208ENST00000566333 RRP7AQ9Y3A4 280 aaKnown RBP10.81□□□□□ -0.68
CDH13-208ENST00000566333 APAF1O14727 1248 aa10.8□□□□□ -0.68
CDH13-208ENST00000566333 TRIM37O94972 964 aa10.8□□□□□ -0.68
CDH13-208ENST00000566333 IL17REQ8NFR9 667 aa10.8□□□□□ -0.68
CDH13-208ENST00000566333 QSER1Q2KHR3 1735 aa10.79□□□□□ -0.68
CDH13-208ENST00000566333 PRIM1P49642 420 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms