RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 AXIN2Q9Y2T1 843 aa22.05■■□□□ 1.12
RAB40C-210ENST00000566290 ARHGEF25Q86VW2 580 aa22.04■■□□□ 1.12
RAB40C-210ENST00000566290 APAF1O14727 1248 aa22.03■■□□□ 1.12
RAB40C-210ENST00000566290 ZBTB7AO95365 584 aa22.03■■□□□ 1.12
RAB40C-210ENST00000566290 PTGER2P43116 358 aa22.03■■□□□ 1.12
RAB40C-210ENST00000566290 EVA1CP58658 441 aa22.03■■□□□ 1.12
RAB40C-210ENST00000566290 COG3Q96JB2 828 aa22.03■■□□□ 1.12
RAB40C-210ENST00000566290 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
RAB40C-210ENST00000566290 COL5A2P05997 1499 aaPredicted RBP22.03■■□□□ 1.12
RAB40C-210ENST00000566290 E9PSI1 815 aa22.02■■□□□ 1.12
RAB40C-210ENST00000566290 TNNT2P45379 298 aaPredicted RBP22.02■■□□□ 1.12
RAB40C-210ENST00000566290 SLFN5Q08AF3 891 aa22.02■■□□□ 1.12
RAB40C-210ENST00000566290 DUSP27Q5VZP5 1158 aa22.02■■□□□ 1.12
RAB40C-210ENST00000566290 POLKQ9UBT6 870 aa22.02■■□□□ 1.12
RAB40C-210ENST00000566290 CASZ1Q86V15 1759 aa22.02■■□□□ 1.11
RAB40C-210ENST00000566290 DIAPH1O60610 1272 aaKnown RBP22.01■■□□□ 1.11
RAB40C-210ENST00000566290 KCNH5Q8NCM2 988 aa22.01■■□□□ 1.11
RAB40C-210ENST00000566290 ATF5Q9Y2D1 282 aaPredicted RBP22.01■■□□□ 1.11
RAB40C-210ENST00000566290 KIF24Q5T7B8 1368 aa22■■□□□ 1.11
RAB40C-210ENST00000566290 PPP4R2Q9NY27 417 aa22■■□□□ 1.11
RAB40C-210ENST00000566290 WDR63Q8IWG1 891 aa21.99■■□□□ 1.11
RAB40C-210ENST00000566290 TCP11L2Q8N4U5 519 aa21.99■■□□□ 1.11
RAB40C-210ENST00000566290 SYT17Q9BSW7 474 aa21.99■■□□□ 1.11
RAB40C-210ENST00000566290 RGPD5Q99666 1765 aa21.99■■□□□ 1.11
RAB40C-210ENST00000566290 CHD4Q14839 1912 aa21.98■■□□□ 1.11
RAB40C-210ENST00000566290 FBLN1P23142 703 aa21.98■■□□□ 1.11
RAB40C-210ENST00000566290 RRP1P56182 461 aaKnown RBP21.98■■□□□ 1.11
RAB40C-210ENST00000566290 CDCA7LQ96GN5 454 aa21.98■■□□□ 1.11
RAB40C-210ENST00000566290 PLSCR1O15162 318 aa21.97■■□□□ 1.11
RAB40C-210ENST00000566290 FCHSD2O94868 740 aa21.97■■□□□ 1.11
RAB40C-210ENST00000566290 PTF1AQ7RTS3 328 aa21.97■■□□□ 1.11
RAB40C-210ENST00000566290 CCDC146Q8IYE0 955 aa21.97■■□□□ 1.11
RAB40C-210ENST00000566290 PLEKHF1Q96S99 279 aa21.97■■□□□ 1.11
RAB40C-210ENST00000566290 FHDC1Q9C0D6 1143 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-210ENST00000566290 WWC1Q8IX03 1113 aa21.96■■□□□ 1.11
RAB40C-210ENST00000566290 PROM2Q8N271 834 aa21.96■■□□□ 1.11
RAB40C-210ENST00000566290 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
RAB40C-210ENST00000566290 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
RAB40C-210ENST00000566290 BCL11BQ9C0K0 894 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-210ENST00000566290 LTN1O94822 1766 aa21.94■■□□□ 1.1
RAB40C-210ENST00000566290 CRB1P82279 1406 aa21.93■■□□□ 1.1
RAB40C-210ENST00000566290 IL16Q14005 1332 aa21.93■■□□□ 1.1
RAB40C-210ENST00000566290 SALL2Q9Y467 1007 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-210ENST00000566290 PEAK1Q9H792 1746 aa21.92■■□□□ 1.1
RAB40C-210ENST00000566290 WDR17Q8IZU2 1322 aa21.91■■□□□ 1.1
RAB40C-210ENST00000566290 THRAP3Q9Y2W1 955 aaKnown RBP21.91■■□□□ 1.1
RAB40C-210ENST00000566290 IL13P35225 146 aa21.9■■□□□ 1.1
RAB40C-210ENST00000566290 TOM1L2Q6ZVM7 507 aa21.9■■□□□ 1.1
RAB40C-210ENST00000566290 SBF2Q86WG5 1849 aa21.9■■□□□ 1.1
RAB40C-210ENST00000566290 RGPD3A6NKT7 1758 aaPredicted RBP21.89■■□□□ 1.1
RAB40C-210ENST00000566290 RGPD4Q7Z3J3 1758 aa21.89■■□□□ 1.1
RAB40C-210ENST00000566290 MAPK8IP3Q9UPT6 1336 aa21.89■■□□□ 1.1
RAB40C-210ENST00000566290 PARP4Q9UKK3 1724 aaKnown RBP21.89■■□□□ 1.09
RAB40C-210ENST00000566290 CEP350Q5VT06 3117 aa21.88■■□□□ 1.09
RAB40C-210ENST00000566290 CT47B1P0C2W7 299 aaPredicted RBP21.88■■□□□ 1.09
RAB40C-210ENST00000566290 SGIP1Q9BQI5 828 aa21.88■■□□□ 1.09
RAB40C-210ENST00000566290 RSPH6AQ9H0K4 717 aa21.88■■□□□ 1.09
RAB40C-210ENST00000566290 ABCC6O95255 1503 aa21.88■■□□□ 1.09
RAB40C-210ENST00000566290 OVOS2A0A0G2JMS6 1433 aa21.88■■□□□ 1.09
RAB40C-210ENST00000566290 RTL1A6NKG5 1358 aa21.87■■□□□ 1.09
RAB40C-210ENST00000566290 MAP3K19Q56UN5 1328 aa21.87■■□□□ 1.09
RAB40C-210ENST00000566290 EMILIN1Q9Y6C2 1016 aa21.87■■□□□ 1.09
RAB40C-210ENST00000566290 GIGYF1O75420 1035 aaPredicted RBP21.86■■□□□ 1.09
RAB40C-210ENST00000566290 CSB-PGBD3P0DP91 1061 aa21.86■■□□□ 1.09
RAB40C-210ENST00000566290 FLT4P35916 1363 aa21.86■■□□□ 1.09
RAB40C-210ENST00000566290 ERBB3P21860 1342 aa21.85■■□□□ 1.09
RAB40C-210ENST00000566290 U2SURPO15042 1029 aaKnown RBP21.85■■□□□ 1.09
RAB40C-210ENST00000566290 TMPOP42166 694 aaKnown RBP21.85■■□□□ 1.09
RAB40C-210ENST00000566290 RRS1Q15050 365 aaKnown RBP21.85■■□□□ 1.09
RAB40C-210ENST00000566290 STK32BQ9NY57 414 aa21.85■■□□□ 1.09
RAB40C-210ENST00000566290 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.84■■□□□ 1.09
RAB40C-210ENST00000566290 IP6K1Q92551 441 aa21.84■■□□□ 1.09
RAB40C-210ENST00000566290 CARD10Q9BWT7 1032 aa21.84■■□□□ 1.09
RAB40C-210ENST00000566290 MYH16Q9H6N6 1097 aa21.84■■□□□ 1.09
RAB40C-210ENST00000566290 SLC15A2Q16348 729 aa21.83■■□□□ 1.09
RAB40C-210ENST00000566290 ANKRD24Q8TF21 1146 aa21.83■■□□□ 1.09
RAB40C-210ENST00000566290 MTFR1LQ9H019 292 aa21.83■■□□□ 1.09
RAB40C-210ENST00000566290 NEFMP07197 916 aa21.82■■□□□ 1.08
RAB40C-210ENST00000566290 HOXC9P31274 260 aa21.82■■□□□ 1.08
RAB40C-210ENST00000566290 SPINK5Q9NQ38 1064 aaPredicted RBP21.82■■□□□ 1.08
RAB40C-210ENST00000566290 WNK3Q9BYP7 1800 aa21.82■■□□□ 1.08
RAB40C-210ENST00000566290 DDB1Q16531 1140 aa21.81■■□□□ 1.08
RAB40C-210ENST00000566290 TXNRD1Q16881 649 aa21.81■■□□□ 1.08
RAB40C-210ENST00000566290 LTV1Q96GA3 475 aaPredicted RBP21.81■■□□□ 1.08
RAB40C-210ENST00000566290 ARXQ96QS3 562 aa21.81■■□□□ 1.08
RAB40C-210ENST00000566290 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
RAB40C-210ENST00000566290 KDRP35968 1356 aa21.8■■□□□ 1.08
RAB40C-210ENST00000566290 IRX6P78412 446 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-210ENST00000566290 NLRP2Q9NX02 1062 aa21.8■■□□□ 1.08
RAB40C-210ENST00000566290 AMPHP49418 695 aa21.79■■□□□ 1.08
RAB40C-210ENST00000566290 CALD1Q05682 793 aaKnown RBP21.79■■□□□ 1.08
RAB40C-210ENST00000566290 GPR162Q16538 588 aa21.79■■□□□ 1.08
RAB40C-210ENST00000566290 MARCH10Q8NA82 808 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-210ENST00000566290 TRIM35Q9UPQ4 493 aa21.79■■□□□ 1.08
RAB40C-210ENST00000566290 PRKAR2BP31323 418 aa21.77■■□□□ 1.08
RAB40C-210ENST00000566290 LMOD3Q0VAK6 560 aa21.77■■□□□ 1.08
RAB40C-210ENST00000566290 NFE2L2Q16236 605 aa21.77■■□□□ 1.08
RAB40C-210ENST00000566290 EIF4A2Q14240 407 aaKnown RBP21.75■■□□□ 1.07
RAB40C-210ENST00000566290 RGPD2P0DJD1 1756 aa21.74■■□□□ 1.07
RAB40C-210ENST00000566290 HSP90AB2PQ58FF8 381 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms