RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 IGSF1Q8N6C5 1336 aa12.86□□□□□ -0.35
TUBGCP4-211ENST00000566251 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
TUBGCP4-211ENST00000566251 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
TUBGCP4-211ENST00000566251 PHACTR3Q96KR7 559 aa12.85□□□□□ -0.35
TUBGCP4-211ENST00000566251 EYA1Q99502 592 aa12.85□□□□□ -0.35
TUBGCP4-211ENST00000566251 PXDNQ92626 1479 aa12.85□□□□□ -0.35
TUBGCP4-211ENST00000566251 NFAT5O94916 1531 aa12.84□□□□□ -0.35
TUBGCP4-211ENST00000566251 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
TUBGCP4-211ENST00000566251 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
TUBGCP4-211ENST00000566251 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
TUBGCP4-211ENST00000566251 PEAK1Q9H792 1746 aa12.83□□□□□ -0.36
TUBGCP4-211ENST00000566251 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.36
TUBGCP4-211ENST00000566251 GNAI1P63096 354 aa12.83□□□□□ -0.36
TUBGCP4-211ENST00000566251 RTF1Q92541 710 aaKnown RBP12.83□□□□□ -0.36
TUBGCP4-211ENST00000566251 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
TUBGCP4-211ENST00000566251 KDRP35968 1356 aa12.82□□□□□ -0.36
TUBGCP4-211ENST00000566251 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
TUBGCP4-211ENST00000566251 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
TUBGCP4-211ENST00000566251 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
TUBGCP4-211ENST00000566251 ANKRD24Q8TF21 1146 aa12.82□□□□□ -0.36
TUBGCP4-211ENST00000566251 RNF123Q5XPI4 1314 aa12.82□□□□□ -0.36
TUBGCP4-211ENST00000566251 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
TUBGCP4-211ENST00000566251 RGS17Q9UGC6 210 aaPredicted RBP12.81□□□□□ -0.36
TUBGCP4-211ENST00000566251 CPDO75976 1380 aa12.81□□□□□ -0.36
TUBGCP4-211ENST00000566251 RRP1P56182 461 aaKnown RBP12.8□□□□□ -0.36
TUBGCP4-211ENST00000566251 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
TUBGCP4-211ENST00000566251 PLEKHO1Q53GL0 409 aaPredicted RBP12.8□□□□□ -0.36
TUBGCP4-211ENST00000566251 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
TUBGCP4-211ENST00000566251 IFT57Q9NWB7 429 aa12.8□□□□□ -0.36
TUBGCP4-211ENST00000566251 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
TUBGCP4-211ENST00000566251 CSB-PGBD3P0DP91 1061 aa12.79□□□□□ -0.36
TUBGCP4-211ENST00000566251 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
TUBGCP4-211ENST00000566251 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
TUBGCP4-211ENST00000566251 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
TUBGCP4-211ENST00000566251 LTN1O94822 1766 aa12.79□□□□□ -0.36
TUBGCP4-211ENST00000566251 ABCC6O95255 1503 aa12.78□□□□□ -0.36
TUBGCP4-211ENST00000566251 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
TUBGCP4-211ENST00000566251 ZNF428Q96B54 188 aa12.78□□□□□ -0.36
TUBGCP4-211ENST00000566251 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
TUBGCP4-211ENST00000566251 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
TUBGCP4-211ENST00000566251 RGPD1P0DJD0 1748 aa12.78□□□□□ -0.36
TUBGCP4-211ENST00000566251 GNAT3A8MTJ3 354 aa12.77□□□□□ -0.37
TUBGCP4-211ENST00000566251 MTHFSDQ2M296 383 aaKnown RBP12.77□□□□□ -0.37
TUBGCP4-211ENST00000566251 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
TUBGCP4-211ENST00000566251 MS4A1P11836 297 aa12.76□□□□□ -0.37
TUBGCP4-211ENST00000566251 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
TUBGCP4-211ENST00000566251 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
TUBGCP4-211ENST00000566251 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
TUBGCP4-211ENST00000566251 PPP4R2Q9NY27 417 aa12.76□□□□□ -0.37
TUBGCP4-211ENST00000566251 ERBB3P21860 1342 aa12.76□□□□□ -0.37
TUBGCP4-211ENST00000566251 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
TUBGCP4-211ENST00000566251 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
TUBGCP4-211ENST00000566251 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
TUBGCP4-211ENST00000566251 EVA1CP58658 441 aa12.75□□□□□ -0.37
TUBGCP4-211ENST00000566251 IRX6P78412 446 aaPredicted RBP12.75□□□□□ -0.37
TUBGCP4-211ENST00000566251 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
TUBGCP4-211ENST00000566251 NHSL1Q5SYE7 1610 aa12.75□□□□□ -0.37
TUBGCP4-211ENST00000566251 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
TUBGCP4-211ENST00000566251 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
TUBGCP4-211ENST00000566251 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
TUBGCP4-211ENST00000566251 CHRNA2Q15822 529 aa12.74□□□□□ -0.37
TUBGCP4-211ENST00000566251 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
TUBGCP4-211ENST00000566251 BABAM1Q9NWV8 329 aa12.74□□□□□ -0.37
TUBGCP4-211ENST00000566251 SPG7Q9UQ90 795 aa12.74□□□□□ -0.37
TUBGCP4-211ENST00000566251 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
TUBGCP4-211ENST00000566251 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
TUBGCP4-211ENST00000566251 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
TUBGCP4-211ENST00000566251 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
TUBGCP4-211ENST00000566251 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
TUBGCP4-211ENST00000566251 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.73□□□□□ -0.37
TUBGCP4-211ENST00000566251 AHDC1Q5TGY3 1603 aaPredicted RBP12.73□□□□□ -0.37
TUBGCP4-211ENST00000566251 MAP3K5Q99683 1374 aa12.72□□□□□ -0.37
TUBGCP4-211ENST00000566251 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
TUBGCP4-211ENST00000566251 RARSP54136 660 aaKnown RBP12.72□□□□□ -0.37
TUBGCP4-211ENST00000566251 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
TUBGCP4-211ENST00000566251 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
TUBGCP4-211ENST00000566251 POTEAQ6S8J7 498 aa12.72□□□□□ -0.37
TUBGCP4-211ENST00000566251 MCM10Q7L590 875 aa12.72□□□□□ -0.37
TUBGCP4-211ENST00000566251 ROBO1Q9Y6N7 1651 aa12.72□□□□□ -0.37
TUBGCP4-211ENST00000566251 FAM83GA6ND36 823 aa12.71□□□□□ -0.37
TUBGCP4-211ENST00000566251 CHL1O00533 1208 aa12.71□□□□□ -0.37
TUBGCP4-211ENST00000566251 DSG3P32926 999 aa12.71□□□□□ -0.37
TUBGCP4-211ENST00000566251 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
TUBGCP4-211ENST00000566251 PDE3AQ14432 1141 aa12.71□□□□□ -0.37
TUBGCP4-211ENST00000566251 TAF7Q15545 349 aaPredicted RBP12.71□□□□□ -0.37
TUBGCP4-211ENST00000566251 TOM1L2Q6ZVM7 507 aa12.71□□□□□ -0.37
TUBGCP4-211ENST00000566251 THUMPD2Q9BTF0 503 aaKnown RBP12.71□□□□□ -0.37
TUBGCP4-211ENST00000566251 NCAPD2Q15021 1401 aa12.71□□□□□ -0.38
TUBGCP4-211ENST00000566251 WDR17Q8IZU2 1322 aa12.7□□□□□ -0.38
TUBGCP4-211ENST00000566251 GSE1Q14687 1217 aa12.7□□□□□ -0.38
TUBGCP4-211ENST00000566251 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
TUBGCP4-211ENST00000566251 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
TUBGCP4-211ENST00000566251 BCAR3O75815 825 aa12.69□□□□□ -0.38
TUBGCP4-211ENST00000566251 HSP90AB1P08238 724 aaKnown RBP12.69□□□□□ -0.38
TUBGCP4-211ENST00000566251 TEFQ10587 303 aa12.69□□□□□ -0.38
TUBGCP4-211ENST00000566251 CARD10Q9BWT7 1032 aa12.69□□□□□ -0.38
TUBGCP4-211ENST00000566251 SMC4Q9NTJ3 1288 aa12.69□□□□□ -0.38
TUBGCP4-211ENST00000566251 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
TUBGCP4-211ENST00000566251 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
TUBGCP4-211ENST00000566251 FAM208AQ9UK61 1670 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms