RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SIX5Q8N196 739 aa8.54□□□□□ -1.04
CNOT1-209ENST00000566240 KIAA1024Q9UPX6 916 aa8.54□□□□□ -1.04
CNOT1-209ENST00000566240 RBM25P49756 843 aaKnown RBP8.53□□□□□ -1.04
CNOT1-209ENST00000566240 SEC13P55735 322 aa8.53□□□□□ -1.04
CNOT1-209ENST00000566240 SH3BP2P78314 561 aa8.53□□□□□ -1.04
CNOT1-209ENST00000566240 ZNF428Q96B54 188 aa8.53□□□□□ -1.04
CNOT1-209ENST00000566240 SIRT1Q96EB6 747 aa8.53□□□□□ -1.04
CNOT1-209ENST00000566240 C1QTNF2Q9BXJ5 285 aa8.53□□□□□ -1.04
CNOT1-209ENST00000566240 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
CNOT1-209ENST00000566240 ESPNB1AK53 854 aa8.52□□□□□ -1.05
CNOT1-209ENST00000566240 USP4Q13107 963 aa8.52□□□□□ -1.05
CNOT1-209ENST00000566240 CCDC102BQ68D86 513 aa8.52□□□□□ -1.05
CNOT1-209ENST00000566240 ZNF787Q6DD87 383 aa8.52□□□□□ -1.05
CNOT1-209ENST00000566240 CCDC125Q86Z20 511 aa8.52□□□□□ -1.05
CNOT1-209ENST00000566240 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
CNOT1-209ENST00000566240 TRMT44Q8IYL2 757 aaKnown RBP8.51□□□□□ -1.05
CNOT1-209ENST00000566240 SEPT12Q8IYM1 358 aa8.51□□□□□ -1.05
CNOT1-209ENST00000566240 CDV3Q9UKY7 258 aaKnown RBP8.51□□□□□ -1.05
CNOT1-209ENST00000566240 AMOTL2Q9Y2J4 779 aa8.51□□□□□ -1.05
CNOT1-209ENST00000566240 PCDHB11Q9Y5F2 797 aa8.51□□□□□ -1.05
CNOT1-209ENST00000566240 SLC19A1P41440 591 aa8.5□□□□□ -1.05
CNOT1-209ENST00000566240 PSME1Q06323 249 aa8.5□□□□□ -1.05
CNOT1-209ENST00000566240 TPCN2Q8NHX9 752 aa8.5□□□□□ -1.05
CNOT1-209ENST00000566240 C1orf216Q8TAB5 229 aa8.5□□□□□ -1.05
CNOT1-209ENST00000566240 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
CNOT1-209ENST00000566240 ZBTB24O43167 697 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-209ENST00000566240 PRMT3O60678 531 aa8.49□□□□□ -1.05
CNOT1-209ENST00000566240 SOWAHDA6NJG2 315 aa8.48□□□□□ -1.05
CNOT1-209ENST00000566240 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-209ENST00000566240 SCNN1AP37088 669 aa8.48□□□□□ -1.05
CNOT1-209ENST00000566240 SERPINB4P48594 390 aa8.48□□□□□ -1.05
CNOT1-209ENST00000566240 PRIMPOLQ96LW4 560 aa8.48□□□□□ -1.05
CNOT1-209ENST00000566240 KCTD15Q96SI1 283 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-209ENST00000566240 OCLNQ16625 522 aa8.47□□□□□ -1.05
CNOT1-209ENST00000566240 SPRYD7Q5W111 196 aa8.47□□□□□ -1.05
CNOT1-209ENST00000566240 ANKLE1Q8NAG6 615 aa8.47□□□□□ -1.05
CNOT1-209ENST00000566240 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-209ENST00000566240 RAB15P59190 212 aa8.46□□□□□ -1.06
CNOT1-209ENST00000566240 TRIM32Q13049 653 aa8.46□□□□□ -1.06
CNOT1-209ENST00000566240 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
CNOT1-209ENST00000566240 TAS1R3Q7RTX0 852 aa8.46□□□□□ -1.06
CNOT1-209ENST00000566240 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
CNOT1-209ENST00000566240 E9PSI1 815 aa8.45□□□□□ -1.06
CNOT1-209ENST00000566240 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-209ENST00000566240 VARSP26640 1264 aaKnown RBP8.45□□□□□ -1.06
CNOT1-209ENST00000566240 ZNF598Q86UK7 904 aaKnown RBP8.45□□□□□ -1.06
CNOT1-209ENST00000566240 ZNF775Q96BV0 537 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-209ENST00000566240 WNT7BP56706 349 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 PRR20EP86478 221 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 PRR20CP86479 221 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 PRR20DP86480 221 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 PRR20BP86481 221 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 PRR20AP86496 221 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 MYT1Q01538 1121 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 PKDCCQ504Y2 493 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 VASH1Q7L8A9 365 aaPredicted RBP8.44□□□□□ -1.06
CNOT1-209ENST00000566240 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
CNOT1-209ENST00000566240 M0R2N6 131 aa8.43□□□□□ -1.06
CNOT1-209ENST00000566240 LGR5O75473 907 aa8.43□□□□□ -1.06
CNOT1-209ENST00000566240 SKOR1P84550 965 aa8.43□□□□□ -1.06
CNOT1-209ENST00000566240 INTS6LQ5JSJ4 861 aaKnown RBP8.43□□□□□ -1.06
CNOT1-209ENST00000566240 ZNF697Q5TEC3 545 aa8.43□□□□□ -1.06
CNOT1-209ENST00000566240 ERVH48-1M5A8F1 160 aa8.42□□□□□ -1.06
CNOT1-209ENST00000566240 DGAT1O75907 488 aa8.42□□□□□ -1.06
CNOT1-209ENST00000566240 ERCC3P19447 782 aa8.42□□□□□ -1.06
CNOT1-209ENST00000566240 SCTRP47872 440 aa8.42□□□□□ -1.06
CNOT1-209ENST00000566240 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
CNOT1-209ENST00000566240 DNAJC14Q6Y2X3 702 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-209ENST00000566240 TSEN2Q8NCE0 465 aaKnown RBP8.42□□□□□ -1.06
CNOT1-209ENST00000566240 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
CNOT1-209ENST00000566240 BIN2Q9UBW5 565 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-209ENST00000566240 TNFRSF10AO00220 468 aa8.41□□□□□ -1.06
CNOT1-209ENST00000566240 ABL1P00519 1130 aa8.41□□□□□ -1.06
CNOT1-209ENST00000566240 WEE1P30291 646 aa8.41□□□□□ -1.06
CNOT1-209ENST00000566240 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
CNOT1-209ENST00000566240 EGFL7Q9UHF1 273 aa8.41□□□□□ -1.06
CNOT1-209ENST00000566240 FAM187AA6NFU0 413 aa8.4□□□□□ -1.06
CNOT1-209ENST00000566240 POTECB2RU33 542 aa8.4□□□□□ -1.06
CNOT1-209ENST00000566240 GDF9O60383 454 aa8.4□□□□□ -1.06
CNOT1-209ENST00000566240 RPIAP49247 311 aa8.4□□□□□ -1.06
CNOT1-209ENST00000566240 MARSP56192 900 aaKnown RBP8.4□□□□□ -1.06
CNOT1-209ENST00000566240 RBM47A0AV96 593 aaKnown RBP8.39□□□□□ -1.07
CNOT1-209ENST00000566240 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
CNOT1-209ENST00000566240 ARID5BQ14865 1188 aa8.39□□□□□ -1.07
CNOT1-209ENST00000566240 CC2D2BQ6DHV5 1058 aa8.39□□□□□ -1.07
CNOT1-209ENST00000566240 EHBP1Q8NDI1 1231 aa8.39□□□□□ -1.07
CNOT1-209ENST00000566240 CDK15Q96Q40 435 aa8.39□□□□□ -1.07
CNOT1-209ENST00000566240 ZNF358Q9NW07 568 aa8.39□□□□□ -1.07
CNOT1-209ENST00000566240 TMEM229AB2RXF0 380 aa8.38□□□□□ -1.07
CNOT1-209ENST00000566240 ICMTO60725 284 aa8.38□□□□□ -1.07
CNOT1-209ENST00000566240 ZNF211Q13398 564 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-209ENST00000566240 GTF3C2Q8WUA4 911 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-209ENST00000566240 TRIM52Q96A61 297 aa8.38□□□□□ -1.07
CNOT1-209ENST00000566240 MKNK1Q9BUB5 465 aa8.38□□□□□ -1.07
CNOT1-209ENST00000566240 ANO2Q9NQ90 1003 aa8.38□□□□□ -1.07
CNOT1-209ENST00000566240 SEPT3Q9UH03 358 aa8.38□□□□□ -1.07
CNOT1-209ENST00000566240 H3BRB1 525 aa8.37□□□□□ -1.07
CNOT1-209ENST00000566240 CD2BP2O95400 341 aaKnown RBP8.37□□□□□ -1.07
CNOT1-209ENST00000566240 DHX9Q08211 1270 aaKnown RBP8.37□□□□□ -1.07
CNOT1-209ENST00000566240 FKBP5Q13451 457 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms