RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 NEUROD2Q15784 382 aa10.25□□□□□ -0.77
CDH1-208ENST00000565810 NFE2L2Q16236 605 aa10.25□□□□□ -0.77
CDH1-208ENST00000565810 DDB1Q16531 1140 aa10.25□□□□□ -0.77
CDH1-208ENST00000565810 C1orf141Q5JVX7 400 aa10.25□□□□□ -0.77
CDH1-208ENST00000565810 NGEFQ8N5V2 710 aa10.25□□□□□ -0.77
CDH1-208ENST00000565810 PHACTR3Q96KR7 559 aa10.25□□□□□ -0.77
CDH1-208ENST00000565810 PLEKHG2Q9H7P9 1386 aa10.25□□□□□ -0.77
CDH1-208ENST00000565810 ATRNO75882 1429 aa10.24□□□□□ -0.77
CDH1-208ENST00000565810 NCAPD2Q15021 1401 aa10.24□□□□□ -0.77
CDH1-208ENST00000565810 RXRBP28702 533 aa10.24□□□□□ -0.77
CDH1-208ENST00000565810 TMPOP42166 694 aaKnown RBP10.24□□□□□ -0.77
CDH1-208ENST00000565810 RIPK4P57078 832 aa10.24□□□□□ -0.77
CDH1-208ENST00000565810 HNRNPUQ00839 825 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDH1-208ENST00000565810 MTHFSDQ2M296 383 aaKnown RBP10.24□□□□□ -0.77
CDH1-208ENST00000565810 ZNF530Q6P9A1 599 aaPredicted RBP10.24□□□□□ -0.77
CDH1-208ENST00000565810 RTF1Q92541 710 aaKnown RBP10.24□□□□□ -0.77
CDH1-208ENST00000565810 MSH5O43196 834 aa10.23□□□□□ -0.77
CDH1-208ENST00000565810 HSP90AB1P08238 724 aaKnown RBP10.23□□□□□ -0.77
CDH1-208ENST00000565810 PDE3BQ13370 1112 aa10.23□□□□□ -0.77
CDH1-208ENST00000565810 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
CDH1-208ENST00000565810 AKAP4Q5JQC9 854 aa10.23□□□□□ -0.77
CDH1-208ENST00000565810 IFNL2Q8IZJ0 200 aa10.23□□□□□ -0.77
CDH1-208ENST00000565810 DDX54Q8TDD1 881 aaKnown RBP10.23□□□□□ -0.77
CDH1-208ENST00000565810 YTHDC1Q96MU7 727 aaKnown RBP10.23□□□□□ -0.77
CDH1-208ENST00000565810 RRP7AQ9Y3A4 280 aaKnown RBP10.23□□□□□ -0.77
CDH1-208ENST00000565810 SALL2Q9Y467 1007 aaPredicted RBP10.23□□□□□ -0.77
CDH1-208ENST00000565810 NWD2Q9ULI1 1742 aa10.22□□□□□ -0.77
CDH1-208ENST00000565810 GNAT3A8MTJ3 354 aa10.22□□□□□ -0.77
CDH1-208ENST00000565810 HTATSF1O43719 755 aaKnown RBP10.22□□□□□ -0.77
CDH1-208ENST00000565810 ONECUT3O60422 494 aaPredicted RBP10.22□□□□□ -0.77
CDH1-208ENST00000565810 PCDH11XQ9BZA7 1347 aa10.22□□□□□ -0.77
CDH1-208ENST00000565810 PCDH11YQ9BZA8 1340 aa10.22□□□□□ -0.77
CDH1-208ENST00000565810 PHKG2P15735 406 aa10.21□□□□□ -0.77
CDH1-208ENST00000565810 SEPT12Q8IYM1 358 aa10.21□□□□□ -0.77
CDH1-208ENST00000565810 RGS17Q9UGC6 210 aaPredicted RBP10.21□□□□□ -0.77
CDH1-208ENST00000565810 OVOS2A0A0G2JMS6 1433 aa10.21□□□□□ -0.78
CDH1-208ENST00000565810 MEGF6O75095 1541 aa10.21□□□□□ -0.78
CDH1-208ENST00000565810 PLCH1Q4KWH8 1693 aa10.21□□□□□ -0.78
CDH1-208ENST00000565810 SENP3-EIF4A1A0A087X0R7 540 aa10.2□□□□□ -0.78
CDH1-208ENST00000565810 DISP2A7MBM2 1401 aa10.2□□□□□ -0.78
CDH1-208ENST00000565810 CALD1Q05682 793 aaKnown RBP10.2□□□□□ -0.78
CDH1-208ENST00000565810 CCDC27Q2M243 656 aa10.2□□□□□ -0.78
CDH1-208ENST00000565810 POTEAQ6S8J7 498 aa10.2□□□□□ -0.78
CDH1-208ENST00000565810 FAM208AQ9UK61 1670 aaKnown RBP10.2□□□□□ -0.78
CDH1-208ENST00000565810 RGPD1P0DJD0 1748 aa10.19□□□□□ -0.78
CDH1-208ENST00000565810 NRAPQ86VF7 1730 aa10.19□□□□□ -0.78
CDH1-208ENST00000565810 MAP3K5Q99683 1374 aa10.19□□□□□ -0.78
CDH1-208ENST00000565810 CYP27B1O15528 508 aa10.19□□□□□ -0.78
CDH1-208ENST00000565810 DCAF5Q96JK2 942 aa10.19□□□□□ -0.78
CDH1-208ENST00000565810 RGPD5Q99666 1765 aa10.19□□□□□ -0.78
CDH1-208ENST00000565810 MPRIPQ6WCQ1 1025 aa10.18□□□□□ -0.78
CDH1-208ENST00000565810 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
CDH1-208ENST00000565810 TRIM35Q9UPQ4 493 aa10.18□□□□□ -0.78
CDH1-208ENST00000565810 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
CDH1-208ENST00000565810 ZBED9Q6R2W3 1325 aa10.17□□□□□ -0.78
CDH1-208ENST00000565810 RNMTO43148 476 aaKnown RBP10.17□□□□□ -0.78
CDH1-208ENST00000565810 TEFQ10587 303 aa10.17□□□□□ -0.78
CDH1-208ENST00000565810 DCTN1Q14203 1278 aa10.17□□□□□ -0.78
CDH1-208ENST00000565810 NKX1-1Q15270 411 aaPredicted RBP10.17□□□□□ -0.78
CDH1-208ENST00000565810 MCM10Q7L590 875 aa10.17□□□□□ -0.78
CDH1-208ENST00000565810 KRT27Q7Z3Y8 459 aa10.17□□□□□ -0.78
CDH1-208ENST00000565810 WDR63Q8IWG1 891 aa10.17□□□□□ -0.78
CDH1-208ENST00000565810 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
CDH1-208ENST00000565810 ERVV-2B6SEH9 535 aa10.16□□□□□ -0.78
CDH1-208ENST00000565810 CABP4P57796 275 aa10.16□□□□□ -0.78
CDH1-208ENST00000565810 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
CDH1-208ENST00000565810 MARCH10Q8NA82 808 aaPredicted RBP10.16□□□□□ -0.78
CDH1-208ENST00000565810 IL17REQ8NFR9 667 aa10.16□□□□□ -0.78
CDH1-208ENST00000565810 LGR6Q9HBX8 967 aa10.16□□□□□ -0.78
CDH1-208ENST00000565810 THUMPD2Q9BTF0 503 aaKnown RBP10.15□□□□□ -0.78
CDH1-208ENST00000565810 LAS1LQ9Y4W2 734 aaKnown RBP10.15□□□□□ -0.78
CDH1-208ENST00000565810 GLI3P10071 1580 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 IL16Q14005 1332 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 E9PSI1 815 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 GNAI1P63096 354 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 TAF7Q15545 349 aaPredicted RBP10.14□□□□□ -0.79
CDH1-208ENST00000565810 FAM196AQ6ZSG2 479 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 SYTL4Q96C24 671 aaPredicted RBP10.14□□□□□ -0.79
CDH1-208ENST00000565810 SLC52A2Q9HAB3 445 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 BABAM1Q9NWV8 329 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 TMOD3Q9NYL9 352 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 RGPD2P0DJD1 1756 aa10.14□□□□□ -0.79
CDH1-208ENST00000565810 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
CDH1-208ENST00000565810 NFATC2IPQ8NCF5 419 aa10.13□□□□□ -0.79
CDH1-208ENST00000565810 CFAP44Q96MT7 982 aa10.13□□□□□ -0.79
CDH1-208ENST00000565810 MYH16Q9H6N6 1097 aa10.13□□□□□ -0.79
CDH1-208ENST00000565810 IFT57Q9NWB7 429 aa10.13□□□□□ -0.79
CDH1-208ENST00000565810 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
CDH1-208ENST00000565810 CEMIPQ8WUJ3 1361 aa10.13□□□□□ -0.79
CDH1-208ENST00000565810 ZNF521Q96K83 1311 aa10.12□□□□□ -0.79
CDH1-208ENST00000565810 PRIM1P49642 420 aaKnown RBP10.12□□□□□ -0.79
CDH1-208ENST00000565810 ACSBG1Q96GR2 724 aa10.12□□□□□ -0.79
CDH1-208ENST00000565810 PARP4Q9UKK3 1724 aaKnown RBP10.12□□□□□ -0.79
CDH1-208ENST00000565810 FAM182BQ5T319 152 aa10.11□□□□□ -0.79
CDH1-208ENST00000565810 TTC5Q8N0Z6 440 aa10.11□□□□□ -0.79
CDH1-208ENST00000565810 RGS12O14924 1447 aa10.1□□□□□ -0.79
CDH1-208ENST00000565810 KDM6AO15550 1401 aaPredicted RBP10.1□□□□□ -0.79
CDH1-208ENST00000565810 CHL1O00533 1208 aa10.1□□□□□ -0.79
CDH1-208ENST00000565810 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
CDH1-208ENST00000565810 SLFN5Q08AF3 891 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms