RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 HSP90AB2PQ58FF8 381 aa26.28■■□□□ 1.8
SPSB3-207ENST00000565550 MEGF6O75095 1541 aa26.28■■□□□ 1.8
SPSB3-207ENST00000565550 YY1P25490 414 aa26.26■■□□□ 1.79
SPSB3-207ENST00000565550 SLC27A3Q5K4L6 730 aa26.26■■□□□ 1.79
SPSB3-207ENST00000565550 RGPD2P0DJD1 1756 aa26.25■■□□□ 1.79
SPSB3-207ENST00000565550 RAPGEF4Q8WZA2 1011 aa26.25■■□□□ 1.79
SPSB3-207ENST00000565550 SGIP1Q9BQI5 828 aa26.25■■□□□ 1.79
SPSB3-207ENST00000565550 PAPPAQ13219 1627 aa26.25■■□□□ 1.79
SPSB3-207ENST00000565550 SMG6Q86US8 1419 aaKnown RBP26.24■■□□□ 1.79
SPSB3-207ENST00000565550 KCNQ4P56696 695 aa26.24■■□□□ 1.79
SPSB3-207ENST00000565550 AKT1S1Q96B36 256 aa26.24■■□□□ 1.79
SPSB3-207ENST00000565550 INSRP06213 1382 aa26.23■■□□□ 1.79
SPSB3-207ENST00000565550 CGNL1Q0VF96 1302 aa26.23■■□□□ 1.79
SPSB3-207ENST00000565550 FHDC1Q9C0D6 1143 aaPredicted RBP26.23■■□□□ 1.79
SPSB3-207ENST00000565550 MYOM1P52179 1685 aa26.22■■□□□ 1.79
SPSB3-207ENST00000565550 TATP17735 454 aaPredicted RBP26.22■■□□□ 1.79
SPSB3-207ENST00000565550 SYT17Q9BSW7 474 aa26.22■■□□□ 1.79
SPSB3-207ENST00000565550 NSD3Q9BZ95 1437 aa26.22■■□□□ 1.79
SPSB3-207ENST00000565550 NSD2O96028 1365 aa26.21■■□□□ 1.79
SPSB3-207ENST00000565550 FLT4P35916 1363 aa26.21■■□□□ 1.79
SPSB3-207ENST00000565550 EMILIN1Q9Y6C2 1016 aa26.2■■□□□ 1.78
SPSB3-207ENST00000565550 KIF24Q5T7B8 1368 aa26.2■■□□□ 1.78
SPSB3-207ENST00000565550 HSPA5P11021 654 aaKnown RBP26.19■■□□□ 1.78
SPSB3-207ENST00000565550 ARXQ96QS3 562 aa26.19■■□□□ 1.78
SPSB3-207ENST00000565550 SHANK3Q9BYB0 1731 aa26.17■■□□□ 1.78
SPSB3-207ENST00000565550 KIF20BQ96Q89 1820 aa26.17■■□□□ 1.78
SPSB3-207ENST00000565550 TFCP2L1Q9NZI6 479 aa26.17■■□□□ 1.78
SPSB3-207ENST00000565550 PPM1GO15355 546 aaPredicted RBP26.16■■□□□ 1.78
SPSB3-207ENST00000565550 POLR3GLQ9BT43 218 aa26.16■■□□□ 1.78
SPSB3-207ENST00000565550 DOT1LQ8TEK3 1739 aa26.16■■□□□ 1.78
SPSB3-207ENST00000565550 PNPLA7Q6ZV29 1317 aa26.15■■□□□ 1.78
SPSB3-207ENST00000565550 SLC16A10Q8TF71 515 aa26.15■■□□□ 1.78
SPSB3-207ENST00000565550 CCNL1Q9UK58 526 aaPredicted RBP26.15■■□□□ 1.78
SPSB3-207ENST00000565550 EIF4G2P78344 907 aaKnown RBP eCLIP26.14■■□□□ 1.78
SPSB3-207ENST00000565550 PCDH11XQ9BZA7 1347 aa26.14■■□□□ 1.77
SPSB3-207ENST00000565550 PCDH11YQ9BZA8 1340 aa26.14■■□□□ 1.77
SPSB3-207ENST00000565550 CYP27B1O15528 508 aa26.11■■□□□ 1.77
SPSB3-207ENST00000565550 WASHC2AQ641Q2 1341 aa26.1■■□□□ 1.77
SPSB3-207ENST00000565550 MPRIPQ6WCQ1 1025 aa26.09■■□□□ 1.77
SPSB3-207ENST00000565550 LY75O60449 1722 aa26.08■■□□□ 1.77
SPSB3-207ENST00000565550 POLD1P28340 1107 aa26.08■■□□□ 1.77
SPSB3-207ENST00000565550 POLKQ9UBT6 870 aa26.08■■□□□ 1.77
SPSB3-207ENST00000565550 MAP3K5Q99683 1374 aa26.07■■□□□ 1.76
SPSB3-207ENST00000565550 EYA1Q99502 592 aa26.06■■□□□ 1.76
SPSB3-207ENST00000565550 KLHL34Q8N239 644 aa26.05■■□□□ 1.76
SPSB3-207ENST00000565550 MSH5O43196 834 aa26.04■■□□□ 1.76
SPSB3-207ENST00000565550 TNNT2P45379 298 aaPredicted RBP26.04■■□□□ 1.76
SPSB3-207ENST00000565550 COL23A1Q86Y22 540 aaPredicted RBP26.04■■□□□ 1.76
SPSB3-207ENST00000565550 SPG7Q9UQ90 795 aa26.04■■□□□ 1.76
SPSB3-207ENST00000565550 QSER1Q2KHR3 1735 aa26.04■■□□□ 1.76
SPSB3-207ENST00000565550 NCAPD2Q15021 1401 aa26.04■■□□□ 1.76
SPSB3-207ENST00000565550 PALLDQ8WX93 1383 aa26.03■■□□□ 1.76
SPSB3-207ENST00000565550 NKX1-1Q15270 411 aaPredicted RBP26.02■■□□□ 1.76
SPSB3-207ENST00000565550 PANK3Q9H999 370 aa26.01■■□□□ 1.75
SPSB3-207ENST00000565550 PIGBQ92521 554 aa26■■□□□ 1.75
SPSB3-207ENST00000565550 TUBGCP6Q96RT7 1819 aa26■■□□□ 1.75
SPSB3-207ENST00000565550 EIF4A2Q14240 407 aaKnown RBP25.99■■□□□ 1.75
SPSB3-207ENST00000565550 SMARCC1Q92922 1105 aaPredicted RBP25.99■■□□□ 1.75
SPSB3-207ENST00000565550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.99■■□□□ 1.75
SPSB3-207ENST00000565550 MAP2P11137 1827 aaKnown RBP25.98■■□□□ 1.75
SPSB3-207ENST00000565550 HMGB2P26583 209 aaKnown RBP25.98■■□□□ 1.75
SPSB3-207ENST00000565550 GPR162Q16538 588 aa25.98■■□□□ 1.75
SPSB3-207ENST00000565550 ANKRD26Q9UPS8 1709 aa25.97■■□□□ 1.75
SPSB3-207ENST00000565550 UTRNP46939 3433 aa25.97■■□□□ 1.75
SPSB3-207ENST00000565550 MSL1Q68DK7 614 aa25.96■■□□□ 1.75
SPSB3-207ENST00000565550 PKD1L3Q7Z443 1732 aa25.96■■□□□ 1.75
SPSB3-207ENST00000565550 COL24A1Q17RW2 1714 aa25.95■■□□□ 1.74
SPSB3-207ENST00000565550 IFNL2Q8IZJ0 200 aa25.95■■□□□ 1.74
SPSB3-207ENST00000565550 NLGN2Q8NFZ4 835 aa25.95■■□□□ 1.74
SPSB3-207ENST00000565550 TOGARAM1Q9Y4F4 1720 aa25.94■■□□□ 1.74
SPSB3-207ENST00000565550 PHKG2P15735 406 aa25.94■■□□□ 1.74
SPSB3-207ENST00000565550 ZNF784Q8NCA9 323 aaPredicted RBP25.94■■□□□ 1.74
SPSB3-207ENST00000565550 FLAD1Q8NFF5 587 aa25.94■■□□□ 1.74
SPSB3-207ENST00000565550 PELP1Q8IZL8 1130 aaKnown RBP25.93■■□□□ 1.74
SPSB3-207ENST00000565550 AK7Q96M32 723 aa25.92■■□□□ 1.74
SPSB3-207ENST00000565550 TMOD3Q9NYL9 352 aa25.92■■□□□ 1.74
SPSB3-207ENST00000565550 ITGB4P16144 1822 aa25.91■■□□□ 1.74
SPSB3-207ENST00000565550 C5P01031 1676 aa25.91■■□□□ 1.74
SPSB3-207ENST00000565550 LOC102724428A0A0B4J2F2 783 aa25.9■■□□□ 1.74
SPSB3-207ENST00000565550 SIK1P57059 783 aa25.9■■□□□ 1.74
SPSB3-207ENST00000565550 AMIGO3Q86WK7 504 aa25.9■■□□□ 1.74
SPSB3-207ENST00000565550 ASAP1Q9ULH1 1129 aa25.9■■□□□ 1.74
SPSB3-207ENST00000565550 SMIM5Q71RC9 77 aa25.89■■□□□ 1.74
SPSB3-207ENST00000565550 KIF7Q2M1P5 1343 aa25.88■■□□□ 1.73
SPSB3-207ENST00000565550 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
SPSB3-207ENST00000565550 MORC1Q86VD1 984 aa25.88■■□□□ 1.73
SPSB3-207ENST00000565550 PHF14O94880 888 aa25.87■■□□□ 1.73
SPSB3-207ENST00000565550 LINC00116Q8NCU8 138 aa25.87■■□□□ 1.73
SPSB3-207ENST00000565550 TAF1LQ8IZX4 1826 aa25.86■■□□□ 1.73
SPSB3-207ENST00000565550 ATG3Q9NT62 314 aa25.86■■□□□ 1.73
SPSB3-207ENST00000565550 C4BP0C0L5 1744 aa25.85■■□□□ 1.73
SPSB3-207ENST00000565550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.85■■□□□ 1.73
SPSB3-207ENST00000565550 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
SPSB3-207ENST00000565550 ITPK1Q13572 414 aa25.84■■□□□ 1.73
SPSB3-207ENST00000565550 PLEKHG2Q9H7P9 1386 aa25.83■■□□□ 1.73
SPSB3-207ENST00000565550 PLEKHO1Q53GL0 409 aaPredicted RBP25.83■■□□□ 1.73
SPSB3-207ENST00000565550 KNSTRNQ9Y448 316 aa25.83■■□□□ 1.73
SPSB3-207ENST00000565550 CHD4Q14839 1912 aa25.82■■□□□ 1.72
SPSB3-207ENST00000565550 YBX3P16989 372 aaKnown RBP eCLIP25.82■■□□□ 1.72
SPSB3-207ENST00000565550 CD2APQ9Y5K6 639 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms