RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 NBPF14Q5TI25 921 aa20.44■□□□□ 0.86
USB1-210ENST00000565151 POLR3GLQ9BT43 218 aa20.44■□□□□ 0.86
USB1-210ENST00000565151 LY75O60449 1722 aa20.44■□□□□ 0.86
USB1-210ENST00000565151 TUBGCP6Q96RT7 1819 aa20.43■□□□□ 0.86
USB1-210ENST00000565151 FLT4P35916 1363 aa20.43■□□□□ 0.86
USB1-210ENST00000565151 PKD1L3Q7Z443 1732 aa20.42■□□□□ 0.86
USB1-210ENST00000565151 ITGB4P16144 1822 aa20.42■□□□□ 0.86
USB1-210ENST00000565151 NSD2O96028 1365 aa20.42■□□□□ 0.86
USB1-210ENST00000565151 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
USB1-210ENST00000565151 KIF24Q5T7B8 1368 aa20.41■□□□□ 0.86
USB1-210ENST00000565151 NCAPD2Q15021 1401 aa20.41■□□□□ 0.86
USB1-210ENST00000565151 LRRC4BQ9NT99 713 aa20.4■□□□□ 0.86
USB1-210ENST00000565151 ZCRB1Q8TBF4 217 aaKnown RBP20.39■□□□□ 0.85
USB1-210ENST00000565151 PANK3Q9H999 370 aa20.39■□□□□ 0.85
USB1-210ENST00000565151 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
USB1-210ENST00000565151 POLKQ9UBT6 870 aa20.38■□□□□ 0.85
USB1-210ENST00000565151 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
USB1-210ENST00000565151 QSER1Q2KHR3 1735 aa20.36■□□□□ 0.85
USB1-210ENST00000565151 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
USB1-210ENST00000565151 WASHC2AQ641Q2 1341 aa20.35■□□□□ 0.85
USB1-210ENST00000565151 SLC15A2Q16348 729 aa20.35■□□□□ 0.85
USB1-210ENST00000565151 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
USB1-210ENST00000565151 TNNT2P45379 298 aaPredicted RBP20.34■□□□□ 0.85
USB1-210ENST00000565151 KCNQ4P56696 695 aa20.34■□□□□ 0.85
USB1-210ENST00000565151 TAF1LQ8IZX4 1826 aa20.34■□□□□ 0.85
USB1-210ENST00000565151 ZNF827Q17R98 1081 aa20.33■□□□□ 0.85
USB1-210ENST00000565151 CYP27B1O15528 508 aa20.32■□□□□ 0.84
USB1-210ENST00000565151 RAPGEF4Q8WZA2 1011 aa20.32■□□□□ 0.84
USB1-210ENST00000565151 EYA1Q99502 592 aa20.32■□□□□ 0.84
USB1-210ENST00000565151 COL24A1Q17RW2 1714 aa20.32■□□□□ 0.84
USB1-210ENST00000565151 ZBTB7AO95365 584 aa20.31■□□□□ 0.84
USB1-210ENST00000565151 TATP17735 454 aaPredicted RBP20.31■□□□□ 0.84
USB1-210ENST00000565151 SPON1Q9HCB6 807 aa20.31■□□□□ 0.84
USB1-210ENST00000565151 KIF7Q2M1P5 1343 aa20.3■□□□□ 0.84
USB1-210ENST00000565151 PTGER2P43116 358 aa20.3■□□□□ 0.84
USB1-210ENST00000565151 STK32BQ9NY57 414 aa20.3■□□□□ 0.84
USB1-210ENST00000565151 EIF4A2Q14240 407 aaKnown RBP20.29■□□□□ 0.84
USB1-210ENST00000565151 AKT1S1Q96B36 256 aa20.29■□□□□ 0.84
USB1-210ENST00000565151 SYTL4Q96C24 671 aaPredicted RBP20.29■□□□□ 0.84
USB1-210ENST00000565151 ATF5Q9Y2D1 282 aaPredicted RBP20.28■□□□□ 0.84
USB1-210ENST00000565151 C5P01031 1676 aa20.27■□□□□ 0.84
USB1-210ENST00000565151 SGIP1Q9BQI5 828 aa20.27■□□□□ 0.84
USB1-210ENST00000565151 PCDH11XQ9BZA7 1347 aa20.26■□□□□ 0.83
USB1-210ENST00000565151 PCDH11YQ9BZA8 1340 aa20.26■□□□□ 0.83
USB1-210ENST00000565151 UTRNP46939 3433 aa20.25■□□□□ 0.83
USB1-210ENST00000565151 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
USB1-210ENST00000565151 SLC27A3Q5K4L6 730 aa20.24■□□□□ 0.83
USB1-210ENST00000565151 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
USB1-210ENST00000565151 NKX1-1Q15270 411 aaPredicted RBP20.22■□□□□ 0.83
USB1-210ENST00000565151 PNPLA7Q6ZV29 1317 aa20.22■□□□□ 0.83
USB1-210ENST00000565151 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
USB1-210ENST00000565151 VIRMAQ69YN4 1812 aaKnown RBP20.2■□□□□ 0.82
USB1-210ENST00000565151 MPRIPQ6WCQ1 1025 aa20.2■□□□□ 0.82
USB1-210ENST00000565151 MORC1Q86VD1 984 aa20.2■□□□□ 0.82
USB1-210ENST00000565151 MTFR1LQ9H019 292 aa20.2■□□□□ 0.82
USB1-210ENST00000565151 UBR3Q6ZT12 1888 aa20.2■□□□□ 0.82
USB1-210ENST00000565151 PPP1R1BQ9UD71 204 aaPredicted RBP20.19■□□□□ 0.82
USB1-210ENST00000565151 CCNL1Q9UK58 526 aaPredicted RBP20.19■□□□□ 0.82
USB1-210ENST00000565151 AEBP1Q8IUX7 1158 aa20.18■□□□□ 0.82
USB1-210ENST00000565151 PIGBQ92521 554 aa20.18■□□□□ 0.82
USB1-210ENST00000565151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.18■□□□□ 0.82
USB1-210ENST00000565151 C4BP0C0L5 1744 aa20.17■□□□□ 0.82
USB1-210ENST00000565151 GOLGB1Q14789 3259 aaKnown RBP20.17■□□□□ 0.82
USB1-210ENST00000565151 PHKG2P15735 406 aa20.17■□□□□ 0.82
USB1-210ENST00000565151 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
USB1-210ENST00000565151 AMIGO3Q86WK7 504 aa20.16■□□□□ 0.82
USB1-210ENST00000565151 SPG7Q9UQ90 795 aa20.16■□□□□ 0.82
USB1-210ENST00000565151 PALLDQ8WX93 1383 aa20.16■□□□□ 0.82
USB1-210ENST00000565151 IL13P35225 146 aa20.14■□□□□ 0.81
USB1-210ENST00000565151 FHDC1Q9C0D6 1143 aaPredicted RBP20.14■□□□□ 0.81
USB1-210ENST00000565151 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
USB1-210ENST00000565151 SMIM5Q71RC9 77 aa20.13■□□□□ 0.81
USB1-210ENST00000565151 COL23A1Q86Y22 540 aaPredicted RBP20.13■□□□□ 0.81
USB1-210ENST00000565151 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
USB1-210ENST00000565151 KDM6AO15550 1401 aaPredicted RBP20.12■□□□□ 0.81
USB1-210ENST00000565151 IFNL2Q8IZJ0 200 aa20.12■□□□□ 0.81
USB1-210ENST00000565151 SYT17Q9BSW7 474 aa20.12■□□□□ 0.81
USB1-210ENST00000565151 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
USB1-210ENST00000565151 KDRP35968 1356 aa20.1■□□□□ 0.81
USB1-210ENST00000565151 MTHFSP49914 203 aa20.1■□□□□ 0.81
USB1-210ENST00000565151 ARXQ96QS3 562 aa20.1■□□□□ 0.81
USB1-210ENST00000565151 COL5A3P25940 1745 aaPredicted RBP20.1■□□□□ 0.81
USB1-210ENST00000565151 MYH14Q7Z406 1995 aaKnown RBP20.1■□□□□ 0.81
USB1-210ENST00000565151 PLEKHG2Q9H7P9 1386 aa20.09■□□□□ 0.81
USB1-210ENST00000565151 CC2D1BQ5T0F9 858 aaKnown RBP20.09■□□□□ 0.81
USB1-210ENST00000565151 SULT6B1Q6IMI4 303 aa20.09■□□□□ 0.81
USB1-210ENST00000565151 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
USB1-210ENST00000565151 ZNF831Q5JPB2 1677 aa20.08■□□□□ 0.81
USB1-210ENST00000565151 ITPK1Q13572 414 aa20.08■□□□□ 0.81
USB1-210ENST00000565151 SLC16A10Q8TF71 515 aa20.08■□□□□ 0.81
USB1-210ENST00000565151 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
USB1-210ENST00000565151 LINC00116Q8NCU8 138 aa20.07■□□□□ 0.8
USB1-210ENST00000565151 SLC4A9Q96Q91 983 aa20.07■□□□□ 0.8
USB1-210ENST00000565151 TMOD3Q9NYL9 352 aa20.07■□□□□ 0.8
USB1-210ENST00000565151 CHD4Q14839 1912 aa20.06■□□□□ 0.8
USB1-210ENST00000565151 LOC102724428A0A0B4J2F2 783 aa20.06■□□□□ 0.8
USB1-210ENST00000565151 SIK1P57059 783 aa20.06■□□□□ 0.8
USB1-210ENST00000565151 SMARCC1Q92922 1105 aaPredicted RBP20.06■□□□□ 0.8
USB1-210ENST00000565151 MAP3K5Q99683 1374 aa20.06■□□□□ 0.8
USB1-210ENST00000565151 ZNF530Q6P9A1 599 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms