RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 TATP17735 454 aaPredicted RBP19.82■□□□□ 0.76
COMMD4-211ENST00000564815 GGNBP2Q9H3C7 697 aa19.82■□□□□ 0.76
COMMD4-211ENST00000564815 SMG6Q86US8 1419 aaKnown RBP19.82■□□□□ 0.76
COMMD4-211ENST00000564815 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
COMMD4-211ENST00000564815 MYOM1P52179 1685 aa19.81■□□□□ 0.76
COMMD4-211ENST00000564815 RRS1Q15050 365 aaKnown RBP19.81■□□□□ 0.76
COMMD4-211ENST00000564815 NBPF6Q5VWK0 638 aa19.81■□□□□ 0.76
COMMD4-211ENST00000564815 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
COMMD4-211ENST00000564815 NBPF4Q96M43 638 aa19.81■□□□□ 0.76
COMMD4-211ENST00000564815 CCNL1Q9UK58 526 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-211ENST00000564815 RTL1A6NKG5 1358 aa19.81■□□□□ 0.76
COMMD4-211ENST00000564815 ZNF784Q8NCA9 323 aaPredicted RBP19.8■□□□□ 0.76
COMMD4-211ENST00000564815 FAM208AQ9UK61 1670 aaKnown RBP19.8■□□□□ 0.76
COMMD4-211ENST00000564815 MSH5O43196 834 aa19.79■□□□□ 0.76
COMMD4-211ENST00000564815 USP47Q96K76 1375 aa19.79■□□□□ 0.76
COMMD4-211ENST00000564815 PNPLA7Q6ZV29 1317 aa19.77■□□□□ 0.76
COMMD4-211ENST00000564815 KCNQ4P56696 695 aa19.77■□□□□ 0.76
COMMD4-211ENST00000564815 TRIM26Q12899 539 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-211ENST00000564815 HSP90AB2PQ58FF8 381 aa19.75■□□□□ 0.75
COMMD4-211ENST00000564815 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
COMMD4-211ENST00000564815 USHBP1Q8N6Y0 703 aa19.75■□□□□ 0.75
COMMD4-211ENST00000564815 FLAD1Q8NFF5 587 aa19.75■□□□□ 0.75
COMMD4-211ENST00000564815 PAPPAQ13219 1627 aa19.75■□□□□ 0.75
COMMD4-211ENST00000564815 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
COMMD4-211ENST00000564815 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
COMMD4-211ENST00000564815 INSRP06213 1382 aa19.74■□□□□ 0.75
COMMD4-211ENST00000564815 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
COMMD4-211ENST00000564815 FLT4P35916 1363 aa19.72■□□□□ 0.75
COMMD4-211ENST00000564815 SMARCC1Q92922 1105 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-211ENST00000564815 TIMELESSQ9UNS1 1208 aa19.72■□□□□ 0.75
COMMD4-211ENST00000564815 MEGF6O75095 1541 aa19.71■□□□□ 0.75
COMMD4-211ENST00000564815 GRIN3BO60391 1043 aa19.71■□□□□ 0.75
COMMD4-211ENST00000564815 MPRIPQ6WCQ1 1025 aa19.71■□□□□ 0.75
COMMD4-211ENST00000564815 CHD4Q14839 1912 aa19.7■□□□□ 0.74
COMMD4-211ENST00000564815 PPM1GO15355 546 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-211ENST00000564815 COL23A1Q86Y22 540 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-211ENST00000564815 NSD2O96028 1365 aa19.7■□□□□ 0.74
COMMD4-211ENST00000564815 SPG7Q9UQ90 795 aa19.69■□□□□ 0.74
COMMD4-211ENST00000564815 QSER1Q2KHR3 1735 aa19.67■□□□□ 0.74
COMMD4-211ENST00000564815 RGPD2P0DJD1 1756 aa19.66■□□□□ 0.74
COMMD4-211ENST00000564815 CARD14Q9BXL6 1004 aa19.66■□□□□ 0.74
COMMD4-211ENST00000564815 DOT1LQ8TEK3 1739 aa19.65■□□□□ 0.74
COMMD4-211ENST00000564815 CYP27B1O15528 508 aa19.65■□□□□ 0.74
COMMD4-211ENST00000564815 C1QTNF8P60827 252 aa19.65■□□□□ 0.74
COMMD4-211ENST00000564815 AK7Q96M32 723 aa19.65■□□□□ 0.74
COMMD4-211ENST00000564815 EMILIN1Q9Y6C2 1016 aa19.65■□□□□ 0.74
COMMD4-211ENST00000564815 PALLDQ8WX93 1383 aa19.65■□□□□ 0.74
COMMD4-211ENST00000564815 LY75O60449 1722 aa19.65■□□□□ 0.74
COMMD4-211ENST00000564815 NLGN2Q8NFZ4 835 aa19.64■□□□□ 0.73
COMMD4-211ENST00000564815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.64■□□□□ 0.73
COMMD4-211ENST00000564815 CD2APQ9Y5K6 639 aa19.64■□□□□ 0.73
COMMD4-211ENST00000564815 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
COMMD4-211ENST00000564815 NKX1-1Q15270 411 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-211ENST00000564815 MSL1Q68DK7 614 aa19.63■□□□□ 0.73
COMMD4-211ENST00000564815 NSD3Q9BZ95 1437 aa19.61■□□□□ 0.73
COMMD4-211ENST00000564815 SENP3-EIF4A1A0A087X0R7 540 aa19.61■□□□□ 0.73
COMMD4-211ENST00000564815 GIGYF1O75420 1035 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-211ENST00000564815 PIGBQ92521 554 aa19.61■□□□□ 0.73
COMMD4-211ENST00000564815 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
COMMD4-211ENST00000564815 POLR3GLQ9BT43 218 aa19.6■□□□□ 0.73
COMMD4-211ENST00000564815 TMOD3Q9NYL9 352 aa19.6■□□□□ 0.73
COMMD4-211ENST00000564815 EYA1Q99502 592 aa19.59■□□□□ 0.73
COMMD4-211ENST00000564815 SHANK3Q9BYB0 1731 aa19.59■□□□□ 0.73
COMMD4-211ENST00000564815 COL24A1Q17RW2 1714 aa19.58■□□□□ 0.72
COMMD4-211ENST00000564815 LOC102724428A0A0B4J2F2 783 aa19.57■□□□□ 0.72
COMMD4-211ENST00000564815 YBX3P16989 372 aaKnown RBP eCLIP19.57■□□□□ 0.72
COMMD4-211ENST00000564815 SIK1P57059 783 aa19.57■□□□□ 0.72
COMMD4-211ENST00000564815 POLKQ9UBT6 870 aa19.57■□□□□ 0.72
COMMD4-211ENST00000564815 KIF20BQ96Q89 1820 aa19.57■□□□□ 0.72
COMMD4-211ENST00000564815 CLSPNQ9HAW4 1339 aa19.56■□□□□ 0.72
COMMD4-211ENST00000564815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
COMMD4-211ENST00000564815 PHF14O94880 888 aa19.56■□□□□ 0.72
COMMD4-211ENST00000564815 SSFA2P28290 1259 aa19.56■□□□□ 0.72
COMMD4-211ENST00000564815 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
COMMD4-211ENST00000564815 UTRNP46939 3433 aa19.54■□□□□ 0.72
COMMD4-211ENST00000564815 HSP90AB1P08238 724 aaKnown RBP19.54■□□□□ 0.72
COMMD4-211ENST00000564815 PHKG2P15735 406 aa19.54■□□□□ 0.72
COMMD4-211ENST00000564815 ATP6V1AP38606 617 aa19.54■□□□□ 0.72
COMMD4-211ENST00000564815 PCGF6Q9BYE7 350 aa19.54■□□□□ 0.72
COMMD4-211ENST00000564815 TNNT2P45379 298 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-211ENST00000564815 ASAP1Q9ULH1 1129 aa19.52■□□□□ 0.72
COMMD4-211ENST00000564815 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
COMMD4-211ENST00000564815 GNPATO15228 680 aa19.51■□□□□ 0.71
COMMD4-211ENST00000564815 EIF4G2P78344 907 aaKnown RBP eCLIP19.51■□□□□ 0.71
COMMD4-211ENST00000564815 EIF4A2Q14240 407 aaKnown RBP19.51■□□□□ 0.71
COMMD4-211ENST00000564815 PLEKHO1Q53GL0 409 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-211ENST00000564815 C5P01031 1676 aa19.51■□□□□ 0.71
COMMD4-211ENST00000564815 ERVV-2B6SEH9 535 aa19.5■□□□□ 0.71
COMMD4-211ENST00000564815 LINC00116Q8NCU8 138 aa19.5■□□□□ 0.71
COMMD4-211ENST00000564815 MAP2P11137 1827 aaKnown RBP19.49■□□□□ 0.71
COMMD4-211ENST00000564815 PLEKHG2Q9H7P9 1386 aa19.49■□□□□ 0.71
COMMD4-211ENST00000564815 AMOTQ4VCS5 1084 aa19.49■□□□□ 0.71
COMMD4-211ENST00000564815 TRAPPC3LQ5T215 181 aa19.49■□□□□ 0.71
COMMD4-211ENST00000564815 GPBP1L1Q9HC44 474 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-211ENST00000564815 ATG3Q9NT62 314 aa19.49■□□□□ 0.71
COMMD4-211ENST00000564815 DCAF5Q96JK2 942 aa19.48■□□□□ 0.71
COMMD4-211ENST00000564815 PANK3Q9H999 370 aa19.48■□□□□ 0.71
COMMD4-211ENST00000564815 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
COMMD4-211ENST00000564815 ITGB4P16144 1822 aa19.48■□□□□ 0.71
COMMD4-211ENST00000564815 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 780.3 ms