RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
GINS3-205ENST00000564814 UNC5CLQ8IV45 518 aa9.91□□□□□ -0.82
GINS3-205ENST00000564814 CDCA7Q9BWT1 371 aaPredicted RBP9.91□□□□□ -0.82
GINS3-205ENST00000564814 LRRC37A3O60309 1634 aa9.91□□□□□ -0.82
GINS3-205ENST00000564814 ATRNO75882 1429 aa9.9□□□□□ -0.82
GINS3-205ENST00000564814 THSD7AQ9UPZ6 1657 aa9.9□□□□□ -0.82
GINS3-205ENST00000564814 SPATA31A5Q5VU36 1347 aa9.9□□□□□ -0.82
GINS3-205ENST00000564814 SPATA31A7Q8IWB4 1347 aa9.9□□□□□ -0.82
GINS3-205ENST00000564814 HTATSF1O43719 755 aaKnown RBP9.9□□□□□ -0.82
GINS3-205ENST00000564814 NEFMP07197 916 aa9.9□□□□□ -0.82
GINS3-205ENST00000564814 PRKAR2BP31323 418 aa9.9□□□□□ -0.82
GINS3-205ENST00000564814 GAS2L2Q8NHY3 880 aa9.9□□□□□ -0.82
GINS3-205ENST00000564814 MEGF6O75095 1541 aa9.9□□□□□ -0.82
GINS3-205ENST00000564814 SPATA31A1Q5TZJ5 1347 aa9.89□□□□□ -0.83
GINS3-205ENST00000564814 MAPK8IP3Q9UPT6 1336 aa9.89□□□□□ -0.83
GINS3-205ENST00000564814 SENP3-EIF4A1A0A087X0R7 540 aa9.89□□□□□ -0.83
GINS3-205ENST00000564814 TMPOP42166 694 aaKnown RBP9.89□□□□□ -0.83
GINS3-205ENST00000564814 AEBP1Q8IUX7 1158 aa9.89□□□□□ -0.83
GINS3-205ENST00000564814 TCP11L2Q8N4U5 519 aa9.89□□□□□ -0.83
GINS3-205ENST00000564814 CNKSR2Q8WXI2 1034 aa9.89□□□□□ -0.83
GINS3-205ENST00000564814 HMOX1P09601 288 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 YY1P25490 414 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 LMOD3Q0VAK6 560 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 PDE3BQ13370 1112 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 NFE2L2Q16236 605 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 LARP1Q6PKG0 1096 aaKnown RBP9.88□□□□□ -0.83
GINS3-205ENST00000564814 TOM1L2Q6ZVM7 507 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 NLRP2Q9NX02 1062 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 TNS2Q63HR2 1409 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 GLI3P10071 1580 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 CEMIPQ8WUJ3 1361 aa9.88□□□□□ -0.83
GINS3-205ENST00000564814 IL16Q14005 1332 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 VIRMAQ69YN4 1812 aaKnown RBP9.87□□□□□ -0.83
GINS3-205ENST00000564814 MRC1P22897 1456 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 DCAF8L1A6NGE4 600 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 APAF1O14727 1248 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
GINS3-205ENST00000564814 CSB-PGBD3P0DP91 1061 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 IL2RBP14784 551 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 EVA1CP58658 441 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 RAPGEF4Q8WZA2 1011 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 GJD4Q96KN9 370 aaPredicted RBP9.87□□□□□ -0.83
GINS3-205ENST00000564814 PHACTR3Q96KR7 559 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 SCN11AQ9UI33 1791 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 BCL9O00512 1426 aa9.87□□□□□ -0.83
GINS3-205ENST00000564814 SIPA1L3O60292 1781 aaPredicted RBP9.86□□□□□ -0.83
GINS3-205ENST00000564814 TATP17735 454 aaPredicted RBP9.86□□□□□ -0.83
GINS3-205ENST00000564814 HNRNPUQ00839 825 aaKnown RBP eCLIP9.86□□□□□ -0.83
GINS3-205ENST00000564814 PLEKHO1Q53GL0 409 aaPredicted RBP9.86□□□□□ -0.83
GINS3-205ENST00000564814 WDR63Q8IWG1 891 aa9.86□□□□□ -0.83
GINS3-205ENST00000564814 LTV1Q96GA3 475 aaPredicted RBP9.86□□□□□ -0.83
GINS3-205ENST00000564814 BRWD3Q6RI45 1802 aa9.86□□□□□ -0.83
GINS3-205ENST00000564814 MAP3K5Q99683 1374 aa9.86□□□□□ -0.83
GINS3-205ENST00000564814 ZBTB7CA1YPR0 619 aa9.85□□□□□ -0.83
GINS3-205ENST00000564814 HOXD11P31277 338 aaPredicted RBP9.85□□□□□ -0.83
GINS3-205ENST00000564814 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
GINS3-205ENST00000564814 MTHFSDQ2M296 383 aaKnown RBP9.85□□□□□ -0.83
GINS3-205ENST00000564814 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
GINS3-205ENST00000564814 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
GINS3-205ENST00000564814 TRIM35Q9UPQ4 493 aa9.85□□□□□ -0.83
GINS3-205ENST00000564814 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
GINS3-205ENST00000564814 PCDH11XQ9BZA7 1347 aa9.84□□□□□ -0.83
GINS3-205ENST00000564814 PCDH11YQ9BZA8 1340 aa9.84□□□□□ -0.83
GINS3-205ENST00000564814 HSP90AB1P08238 724 aaKnown RBP9.84□□□□□ -0.83
GINS3-205ENST00000564814 CALD1Q05682 793 aaKnown RBP9.84□□□□□ -0.83
GINS3-205ENST00000564814 CCDC146Q8IYE0 955 aa9.84□□□□□ -0.83
GINS3-205ENST00000564814 TRMT2AQ8IZ69 625 aaKnown RBP9.84□□□□□ -0.83
GINS3-205ENST00000564814 USHBP1Q8N6Y0 703 aa9.84□□□□□ -0.83
GINS3-205ENST00000564814 STRN4Q9NRL3 753 aa9.84□□□□□ -0.83
GINS3-205ENST00000564814 BABAM1Q9NWV8 329 aa9.84□□□□□ -0.83
GINS3-205ENST00000564814 CCDC9Q9Y3X0 531 aaKnown RBP9.84□□□□□ -0.83
GINS3-205ENST00000564814 GNAT3A8MTJ3 354 aa9.83□□□□□ -0.84
GINS3-205ENST00000564814 RIPK4P57078 832 aa9.83□□□□□ -0.84
GINS3-205ENST00000564814 IFNL2Q8IZJ0 200 aa9.83□□□□□ -0.84
GINS3-205ENST00000564814 EP400Q96L91 3159 aa9.82□□□□□ -0.84
GINS3-205ENST00000564814 ZNF853P0CG23 659 aa9.82□□□□□ -0.84
GINS3-205ENST00000564814 PHKG2P15735 406 aa9.82□□□□□ -0.84
GINS3-205ENST00000564814 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
GINS3-205ENST00000564814 KDM6AO15550 1401 aaPredicted RBP9.82□□□□□ -0.84
GINS3-205ENST00000564814 KDM3BQ7LBC6 1761 aa9.81□□□□□ -0.84
GINS3-205ENST00000564814 E9PSI1 815 aa9.81□□□□□ -0.84
GINS3-205ENST00000564814 CYP27B1O15528 508 aa9.81□□□□□ -0.84
GINS3-205ENST00000564814 GOLGA2Q08379 1002 aa9.81□□□□□ -0.84
GINS3-205ENST00000564814 DCAF5Q96JK2 942 aa9.81□□□□□ -0.84
GINS3-205ENST00000564814 TOGARAM1Q9Y4F4 1720 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 A0A0G2JS52 829 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 SLC34A2O95436 690 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 MYT1Q01538 1121 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 SLFN5Q08AF3 891 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 C1orf141Q5JVX7 400 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 ZNF530Q6P9A1 599 aaPredicted RBP9.8□□□□□ -0.84
GINS3-205ENST00000564814 SEPT12Q8IYM1 358 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 IL17REQ8NFR9 667 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 RTF1Q92541 710 aaKnown RBP9.8□□□□□ -0.84
GINS3-205ENST00000564814 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 IFT57Q9NWB7 429 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 PAPPAQ13219 1627 aa9.8□□□□□ -0.84
GINS3-205ENST00000564814 CICQ96RK0 1608 aaPredicted RBP9.8□□□□□ -0.84
GINS3-205ENST00000564814 SOS1Q07889 1333 aaPredicted RBP9.8□□□□□ -0.84
GINS3-205ENST00000564814 EXOC5O00471 708 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms