RNA–Protein interactions for RNA: ENST00000564675.5

SNUPN-206, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNUPN, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-206ENST00000564675 SPG7Q9UQ90 795 aa20.29■□□□□ 0.84
SNUPN-206ENST00000564675 NCAPD2Q15021 1401 aa20.29■□□□□ 0.84
SNUPN-206ENST00000564675 CCDC146Q8IYE0 955 aa20.29■□□□□ 0.84
SNUPN-206ENST00000564675 ZCRB1Q8TBF4 217 aaKnown RBP20.29■□□□□ 0.84
SNUPN-206ENST00000564675 PHACTR3Q96KR7 559 aa20.29■□□□□ 0.84
SNUPN-206ENST00000564675 NRAPQ86VF7 1730 aa20.28■□□□□ 0.84
SNUPN-206ENST00000564675 MAPK8IP3Q9UPT6 1336 aa20.27■□□□□ 0.84
SNUPN-206ENST00000564675 DDB1Q16531 1140 aa20.27■□□□□ 0.84
SNUPN-206ENST00000564675 SEPT12Q8IYM1 358 aa20.26■□□□□ 0.83
SNUPN-206ENST00000564675 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.25■□□□□ 0.83
SNUPN-206ENST00000564675 FAM208AQ9UK61 1670 aaKnown RBP20.25■□□□□ 0.83
SNUPN-206ENST00000564675 PDE3BQ13370 1112 aa20.24■□□□□ 0.83
SNUPN-206ENST00000564675 MTHFSDQ2M296 383 aaKnown RBP20.24■□□□□ 0.83
SNUPN-206ENST00000564675 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
SNUPN-206ENST00000564675 DDX54Q8TDD1 881 aaKnown RBP20.24■□□□□ 0.83
SNUPN-206ENST00000564675 RGPD1P0DJD0 1748 aa20.23■□□□□ 0.83
SNUPN-206ENST00000564675 PLEKHG2Q9H7P9 1386 aa20.23■□□□□ 0.83
SNUPN-206ENST00000564675 DISP2A7MBM2 1401 aa20.22■□□□□ 0.83
SNUPN-206ENST00000564675 RGPD2P0DJD1 1756 aa20.22■□□□□ 0.83
SNUPN-206ENST00000564675 MEGF6O75095 1541 aa20.22■□□□□ 0.83
SNUPN-206ENST00000564675 APAF1O14727 1248 aa20.22■□□□□ 0.83
SNUPN-206ENST00000564675 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
SNUPN-206ENST00000564675 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
SNUPN-206ENST00000564675 OVOS2A0A0G2JMS6 1433 aa20.21■□□□□ 0.83
SNUPN-206ENST00000564675 IFNL2Q8IZJ0 200 aa20.21■□□□□ 0.83
SNUPN-206ENST00000564675 NFE2L2Q16236 605 aa20.2■□□□□ 0.82
SNUPN-206ENST00000564675 TMPOP42166 694 aaKnown RBP20.19■□□□□ 0.82
SNUPN-206ENST00000564675 RIPK4P57078 832 aa20.19■□□□□ 0.82
SNUPN-206ENST00000564675 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
SNUPN-206ENST00000564675 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
SNUPN-206ENST00000564675 PCDH11XQ9BZA7 1347 aa20.19■□□□□ 0.82
SNUPN-206ENST00000564675 PCDH11YQ9BZA8 1340 aa20.19■□□□□ 0.82
SNUPN-206ENST00000564675 GLI3P10071 1580 aa20.19■□□□□ 0.82
SNUPN-206ENST00000564675 CYP27B1O15528 508 aa20.19■□□□□ 0.82
SNUPN-206ENST00000564675 GNAT3A8MTJ3 354 aa20.17■□□□□ 0.82
SNUPN-206ENST00000564675 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
SNUPN-206ENST00000564675 PHKG2P15735 406 aa20.17■□□□□ 0.82
SNUPN-206ENST00000564675 RRP7AQ9Y3A4 280 aaKnown RBP20.17■□□□□ 0.82
SNUPN-206ENST00000564675 KRT27Q7Z3Y8 459 aa20.16■□□□□ 0.82
SNUPN-206ENST00000564675 MARCH10Q8NA82 808 aaPredicted RBP20.16■□□□□ 0.82
SNUPN-206ENST00000564675 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
SNUPN-206ENST00000564675 HTATSF1O43719 755 aaKnown RBP20.16■□□□□ 0.82
SNUPN-206ENST00000564675 NGEFQ8N5V2 710 aa20.15■□□□□ 0.82
SNUPN-206ENST00000564675 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
SNUPN-206ENST00000564675 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
SNUPN-206ENST00000564675 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.81
SNUPN-206ENST00000564675 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
SNUPN-206ENST00000564675 MPRIPQ6WCQ1 1025 aa20.13■□□□□ 0.81
SNUPN-206ENST00000564675 DCAF5Q96JK2 942 aa20.13■□□□□ 0.81
SNUPN-206ENST00000564675 SALL2Q9Y467 1007 aaPredicted RBP20.13■□□□□ 0.81
SNUPN-206ENST00000564675 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
SNUPN-206ENST00000564675 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
SNUPN-206ENST00000564675 MAP3K5Q99683 1374 aa20.11■□□□□ 0.81
SNUPN-206ENST00000564675 IL17REQ8NFR9 667 aa20.1■□□□□ 0.81
SNUPN-206ENST00000564675 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
SNUPN-206ENST00000564675 RNMTO43148 476 aaKnown RBP20.1■□□□□ 0.81
SNUPN-206ENST00000564675 HNRNPUQ00839 825 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNUPN-206ENST00000564675 CCDC27Q2M243 656 aa20.1■□□□□ 0.81
SNUPN-206ENST00000564675 FAM182BQ5T319 152 aa20.1■□□□□ 0.81
SNUPN-206ENST00000564675 MCM10Q7L590 875 aa20.1■□□□□ 0.81
SNUPN-206ENST00000564675 PARP4Q9UKK3 1724 aaKnown RBP20.09■□□□□ 0.81
SNUPN-206ENST00000564675 FAM196AQ6ZSG2 479 aa20.09■□□□□ 0.81
SNUPN-206ENST00000564675 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
SNUPN-206ENST00000564675 DCTN1Q14203 1278 aa20.08■□□□□ 0.81
SNUPN-206ENST00000564675 RGS12O14924 1447 aa20.08■□□□□ 0.8
SNUPN-206ENST00000564675 THSD7AQ9UPZ6 1657 aa20.08■□□□□ 0.8
SNUPN-206ENST00000564675 WWC1Q8IX03 1113 aa20.07■□□□□ 0.8
SNUPN-206ENST00000564675 CABP4P57796 275 aa20.07■□□□□ 0.8
SNUPN-206ENST00000564675 TEFQ10587 303 aa20.06■□□□□ 0.8
SNUPN-206ENST00000564675 PRIM1P49642 420 aaKnown RBP20.05■□□□□ 0.8
SNUPN-206ENST00000564675 CALD1Q05682 793 aaKnown RBP20.05■□□□□ 0.8
SNUPN-206ENST00000564675 NFATC2IPQ8NCF5 419 aa20.05■□□□□ 0.8
SNUPN-206ENST00000564675 ACSBG1Q96GR2 724 aa20.05■□□□□ 0.8
SNUPN-206ENST00000564675 SYTL4Q96C24 671 aaPredicted RBP20.04■□□□□ 0.8
SNUPN-206ENST00000564675 THUMPD2Q9BTF0 503 aaKnown RBP20.04■□□□□ 0.8
SNUPN-206ENST00000564675 WDR63Q8IWG1 891 aa20.03■□□□□ 0.8
SNUPN-206ENST00000564675 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
SNUPN-206ENST00000564675 PKD1L3Q7Z443 1732 aa20.03■□□□□ 0.8
SNUPN-206ENST00000564675 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
SNUPN-206ENST00000564675 TMOD3Q9NYL9 352 aa20.03■□□□□ 0.8
SNUPN-206ENST00000564675 LRRC37A3O60309 1634 aa20.03■□□□□ 0.8
SNUPN-206ENST00000564675 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.8
SNUPN-206ENST00000564675 CEMIPQ8WUJ3 1361 aa20.02■□□□□ 0.8
SNUPN-206ENST00000564675 BCL9O00512 1426 aa20.02■□□□□ 0.79
SNUPN-206ENST00000564675 WNK3Q9BYP7 1800 aa20.01■□□□□ 0.79
SNUPN-206ENST00000564675 KCNQ2O43526 872 aa20■□□□□ 0.79
SNUPN-206ENST00000564675 KDM6AO15550 1401 aaPredicted RBP20■□□□□ 0.79
SNUPN-206ENST00000564675 PIGBQ92521 554 aa20■□□□□ 0.79
SNUPN-206ENST00000564675 LAS1LQ9Y4W2 734 aaKnown RBP20■□□□□ 0.79
SNUPN-206ENST00000564675 BCL11BQ9C0K0 894 aaPredicted RBP19.99■□□□□ 0.79
SNUPN-206ENST00000564675 BTBD11A6QL63 1104 aa19.98■□□□□ 0.79
SNUPN-206ENST00000564675 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
SNUPN-206ENST00000564675 TRIM37O94972 964 aa19.97■□□□□ 0.79
SNUPN-206ENST00000564675 GNAI1P63096 354 aa19.97■□□□□ 0.79
SNUPN-206ENST00000564675 GOLGA2Q08379 1002 aa19.97■□□□□ 0.79
SNUPN-206ENST00000564675 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
SNUPN-206ENST00000564675 BABAM1Q9NWV8 329 aa19.97■□□□□ 0.79
SNUPN-206ENST00000564675 IL16Q14005 1332 aa19.97■□□□□ 0.79
SNUPN-206ENST00000564675 IFT57Q9NWB7 429 aa19.97■□□□□ 0.79
SNUPN-206ENST00000564675 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms