RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
CLN6-203ENST00000563917 YY1P25490 414 aa13.2□□□□□ -0.3
CLN6-203ENST00000563917 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
CLN6-203ENST00000563917 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
CLN6-203ENST00000563917 PDGFDQ9GZP0 370 aaPredicted RBP13.2□□□□□ -0.3
CLN6-203ENST00000563917 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
CLN6-203ENST00000563917 INSRP06213 1382 aa13.2□□□□□ -0.3
CLN6-203ENST00000563917 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
CLN6-203ENST00000563917 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
CLN6-203ENST00000563917 USHBP1Q8N6Y0 703 aa13.19□□□□□ -0.3
CLN6-203ENST00000563917 POLD1P28340 1107 aa13.18□□□□□ -0.3
CLN6-203ENST00000563917 EIF4G2P78344 907 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLN6-203ENST00000563917 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
CLN6-203ENST00000563917 SLC16A10Q8TF71 515 aa13.18□□□□□ -0.3
CLN6-203ENST00000563917 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
CLN6-203ENST00000563917 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
CLN6-203ENST00000563917 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
CLN6-203ENST00000563917 PTGER2P43116 358 aa13.17□□□□□ -0.3
CLN6-203ENST00000563917 ARXQ96QS3 562 aa13.17□□□□□ -0.3
CLN6-203ENST00000563917 CCNL1Q9UK58 526 aaPredicted RBP13.17□□□□□ -0.3
CLN6-203ENST00000563917 MEGF6O75095 1541 aa13.17□□□□□ -0.3
CLN6-203ENST00000563917 MSH5O43196 834 aa13.16□□□□□ -0.3
CLN6-203ENST00000563917 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
CLN6-203ENST00000563917 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
CLN6-203ENST00000563917 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
CLN6-203ENST00000563917 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
CLN6-203ENST00000563917 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
CLN6-203ENST00000563917 FHDC1Q9C0D6 1143 aaPredicted RBP13.15□□□□□ -0.3
CLN6-203ENST00000563917 SPG7Q9UQ90 795 aa13.15□□□□□ -0.3
CLN6-203ENST00000563917 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.3
CLN6-203ENST00000563917 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
CLN6-203ENST00000563917 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
CLN6-203ENST00000563917 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
CLN6-203ENST00000563917 MYOM1P52179 1685 aa13.13□□□□□ -0.31
CLN6-203ENST00000563917 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
CLN6-203ENST00000563917 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
CLN6-203ENST00000563917 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
CLN6-203ENST00000563917 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
CLN6-203ENST00000563917 KCNQ4P56696 695 aa13.12□□□□□ -0.31
CLN6-203ENST00000563917 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
CLN6-203ENST00000563917 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
CLN6-203ENST00000563917 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
CLN6-203ENST00000563917 PNPLA7Q6ZV29 1317 aa13.11□□□□□ -0.31
CLN6-203ENST00000563917 NSD2O96028 1365 aa13.1□□□□□ -0.31
CLN6-203ENST00000563917 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
CLN6-203ENST00000563917 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
CLN6-203ENST00000563917 CYP27B1O15528 508 aa13.09□□□□□ -0.31
CLN6-203ENST00000563917 GPR162Q16538 588 aa13.09□□□□□ -0.31
CLN6-203ENST00000563917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLN6-203ENST00000563917 POLKQ9UBT6 870 aa13.09□□□□□ -0.31
CLN6-203ENST00000563917 PALLDQ8WX93 1383 aa13.08□□□□□ -0.31
CLN6-203ENST00000563917 MAP3K5Q99683 1374 aa13.08□□□□□ -0.31
CLN6-203ENST00000563917 LY75O60449 1722 aa13.08□□□□□ -0.32
CLN6-203ENST00000563917 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
CLN6-203ENST00000563917 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.32
CLN6-203ENST00000563917 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
CLN6-203ENST00000563917 AK7Q96M32 723 aa13.08□□□□□ -0.32
CLN6-203ENST00000563917 EYA1Q99502 592 aa13.08□□□□□ -0.32
CLN6-203ENST00000563917 PANK3Q9H999 370 aa13.08□□□□□ -0.32
CLN6-203ENST00000563917 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
CLN6-203ENST00000563917 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
CLN6-203ENST00000563917 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
CLN6-203ENST00000563917 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
CLN6-203ENST00000563917 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
CLN6-203ENST00000563917 HSP90AB1P08238 724 aaKnown RBP13.05□□□□□ -0.32
CLN6-203ENST00000563917 EIF4A2Q14240 407 aaKnown RBP13.05□□□□□ -0.32
CLN6-203ENST00000563917 COL23A1Q86Y22 540 aaPredicted RBP13.05□□□□□ -0.32
CLN6-203ENST00000563917 PKD1L3Q7Z443 1732 aa13.05□□□□□ -0.32
CLN6-203ENST00000563917 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
CLN6-203ENST00000563917 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
CLN6-203ENST00000563917 PIGBQ92521 554 aa13.04□□□□□ -0.32
CLN6-203ENST00000563917 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
CLN6-203ENST00000563917 NCAPD2Q15021 1401 aa13.04□□□□□ -0.32
CLN6-203ENST00000563917 PHKG2P15735 406 aa13.03□□□□□ -0.32
CLN6-203ENST00000563917 MSL1Q68DK7 614 aa13.03□□□□□ -0.32
CLN6-203ENST00000563917 C5P01031 1676 aa13.02□□□□□ -0.32
CLN6-203ENST00000563917 LOC102724428A0A0B4J2F2 783 aa13.02□□□□□ -0.33
CLN6-203ENST00000563917 SIK1P57059 783 aa13.02□□□□□ -0.33
CLN6-203ENST00000563917 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.33
CLN6-203ENST00000563917 ITGB4P16144 1822 aa13.02□□□□□ -0.33
CLN6-203ENST00000563917 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.33
CLN6-203ENST00000563917 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
CLN6-203ENST00000563917 PHF14O94880 888 aa13.01□□□□□ -0.33
CLN6-203ENST00000563917 ATP6V1AP38606 617 aa13.01□□□□□ -0.33
CLN6-203ENST00000563917 C1orf141Q5JVX7 400 aa13.01□□□□□ -0.33
CLN6-203ENST00000563917 DCAF5Q96JK2 942 aa13.01□□□□□ -0.33
CLN6-203ENST00000563917 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
CLN6-203ENST00000563917 ERVV-2B6SEH9 535 aa13□□□□□ -0.33
CLN6-203ENST00000563917 SSFA2P28290 1259 aa13□□□□□ -0.33
CLN6-203ENST00000563917 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
CLN6-203ENST00000563917 CHD4Q14839 1912 aa13□□□□□ -0.33
CLN6-203ENST00000563917 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
CLN6-203ENST00000563917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.99□□□□□ -0.33
CLN6-203ENST00000563917 GNPATO15228 680 aa12.99□□□□□ -0.33
CLN6-203ENST00000563917 CABP4P57796 275 aa12.99□□□□□ -0.33
CLN6-203ENST00000563917 ZNF784Q8NCA9 323 aaPredicted RBP12.99□□□□□ -0.33
CLN6-203ENST00000563917 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
CLN6-203ENST00000563917 CD2APQ9Y5K6 639 aa12.99□□□□□ -0.33
CLN6-203ENST00000563917 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
CLN6-203ENST00000563917 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms