RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
SYNGR3-203ENST00000563869 SGIP1Q9BQI5 828 aa25.6■■□□□ 1.69
SYNGR3-203ENST00000563869 PAPPAQ13219 1627 aa25.59■■□□□ 1.69
SYNGR3-203ENST00000563869 CHD4Q14839 1912 aa25.59■■□□□ 1.69
SYNGR3-203ENST00000563869 ZNF784Q8NCA9 323 aaPredicted RBP25.58■■□□□ 1.69
SYNGR3-203ENST00000563869 BTAF1O14981 1849 aa25.57■■□□□ 1.68
SYNGR3-203ENST00000563869 ERBB3P21860 1342 aa25.57■■□□□ 1.68
SYNGR3-203ENST00000563869 RALBP1Q15311 655 aa25.56■■□□□ 1.68
SYNGR3-203ENST00000563869 ACSBG1Q96GR2 724 aa25.56■■□□□ 1.68
SYNGR3-203ENST00000563869 CC2D1BQ5T0F9 858 aaKnown RBP25.54■■□□□ 1.68
SYNGR3-203ENST00000563869 NLRP2Q9NX02 1062 aa25.54■■□□□ 1.68
SYNGR3-203ENST00000563869 FAM208AQ9UK61 1670 aaKnown RBP25.54■■□□□ 1.68
SYNGR3-203ENST00000563869 IL2RBP14784 551 aa25.53■■□□□ 1.68
SYNGR3-203ENST00000563869 AMPHP49418 695 aa25.52■■□□□ 1.68
SYNGR3-203ENST00000563869 ARXQ96QS3 562 aa25.52■■□□□ 1.68
SYNGR3-203ENST00000563869 UTRNP46939 3433 aa25.52■■□□□ 1.68
SYNGR3-203ENST00000563869 FLT4P35916 1363 aa25.52■■□□□ 1.68
SYNGR3-203ENST00000563869 MAP3K5Q99683 1374 aa25.51■■□□□ 1.67
SYNGR3-203ENST00000563869 SMG6Q86US8 1419 aaKnown RBP25.5■■□□□ 1.67
SYNGR3-203ENST00000563869 KAT6BQ8WYB5 2073 aa25.49■■□□□ 1.67
SYNGR3-203ENST00000563869 IP6K1Q92551 441 aa25.49■■□□□ 1.67
SYNGR3-203ENST00000563869 QSER1Q2KHR3 1735 aa25.49■■□□□ 1.67
SYNGR3-203ENST00000563869 MAP3K19Q56UN5 1328 aa25.48■■□□□ 1.67
SYNGR3-203ENST00000563869 ANKRD24Q8TF21 1146 aa25.48■■□□□ 1.67
SYNGR3-203ENST00000563869 ZNF827Q17R98 1081 aa25.47■■□□□ 1.67
SYNGR3-203ENST00000563869 LRRC4BQ9NT99 713 aa25.46■■□□□ 1.67
SYNGR3-203ENST00000563869 INSRP06213 1382 aa25.44■■□□□ 1.66
SYNGR3-203ENST00000563869 COL24A1Q17RW2 1714 aa25.44■■□□□ 1.66
SYNGR3-203ENST00000563869 ANP32CO43423 234 aa25.44■■□□□ 1.66
SYNGR3-203ENST00000563869 CFAP53Q96M91 514 aa25.44■■□□□ 1.66
SYNGR3-203ENST00000563869 HOXC9P31274 260 aa25.43■■□□□ 1.66
SYNGR3-203ENST00000563869 TNNT2P45379 298 aaPredicted RBP25.43■■□□□ 1.66
SYNGR3-203ENST00000563869 SLC16A10Q8TF71 515 aa25.43■■□□□ 1.66
SYNGR3-203ENST00000563869 POLKQ9UBT6 870 aa25.43■■□□□ 1.66
SYNGR3-203ENST00000563869 RRS1Q15050 365 aaKnown RBP25.42■■□□□ 1.66
SYNGR3-203ENST00000563869 AKT1S1Q96B36 256 aa25.42■■□□□ 1.66
SYNGR3-203ENST00000563869 SLC27A3Q5K4L6 730 aa25.41■■□□□ 1.66
SYNGR3-203ENST00000563869 PPM1GO15355 546 aaPredicted RBP25.4■■□□□ 1.66
SYNGR3-203ENST00000563869 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.66
SYNGR3-203ENST00000563869 TUBGCP6Q96RT7 1819 aa25.38■■□□□ 1.65
SYNGR3-203ENST00000563869 C1QTNF8P60827 252 aa25.38■■□□□ 1.65
SYNGR3-203ENST00000563869 GPR162Q16538 588 aa25.38■■□□□ 1.65
SYNGR3-203ENST00000563869 PRKRIP1Q9H875 184 aaPredicted RBP25.38■■□□□ 1.65
SYNGR3-203ENST00000563869 MTHFSP49914 203 aa25.37■■□□□ 1.65
SYNGR3-203ENST00000563869 DDX54Q8TDD1 881 aaKnown RBP25.37■■□□□ 1.65
SYNGR3-203ENST00000563869 EMILIN1Q9Y6C2 1016 aa25.37■■□□□ 1.65
SYNGR3-203ENST00000563869 LY75O60449 1722 aa25.37■■□□□ 1.65
SYNGR3-203ENST00000563869 POLD1P28340 1107 aa25.36■■□□□ 1.65
SYNGR3-203ENST00000563869 PPP2R1AP30153 589 aa25.36■■□□□ 1.65
SYNGR3-203ENST00000563869 PNPLA7Q6ZV29 1317 aa25.36■■□□□ 1.65
SYNGR3-203ENST00000563869 DOT1LQ8TEK3 1739 aa25.35■■□□□ 1.65
SYNGR3-203ENST00000563869 SENP3-EIF4A1A0A087X0R7 540 aa25.35■■□□□ 1.65
SYNGR3-203ENST00000563869 PLEKHG2Q9H7P9 1386 aa25.33■■□□□ 1.65
SYNGR3-203ENST00000563869 CNGB1Q14028 1251 aaPredicted RBP25.33■■□□□ 1.65
SYNGR3-203ENST00000563869 SHANK3Q9BYB0 1731 aa25.32■■□□□ 1.64
SYNGR3-203ENST00000563869 KLHL34Q8N239 644 aa25.32■■□□□ 1.64
SYNGR3-203ENST00000563869 LTV1Q96GA3 475 aaPredicted RBP25.32■■□□□ 1.64
SYNGR3-203ENST00000563869 TFCP2L1Q9NZI6 479 aa25.32■■□□□ 1.64
SYNGR3-203ENST00000563869 NUDCQ9Y266 331 aa25.32■■□□□ 1.64
SYNGR3-203ENST00000563869 HSP90AB2PQ58FF8 381 aa25.31■■□□□ 1.64
SYNGR3-203ENST00000563869 RGPD2P0DJD1 1756 aa25.31■■□□□ 1.64
SYNGR3-203ENST00000563869 FBLN1P23142 703 aa25.3■■□□□ 1.64
SYNGR3-203ENST00000563869 PRIM1P49642 420 aaKnown RBP25.3■■□□□ 1.64
SYNGR3-203ENST00000563869 SYTL4Q96C24 671 aaPredicted RBP25.3■■□□□ 1.64
SYNGR3-203ENST00000563869 DIAPH1O60610 1272 aaKnown RBP25.29■■□□□ 1.64
SYNGR3-203ENST00000563869 KCNQ4P56696 695 aa25.28■■□□□ 1.64
SYNGR3-203ENST00000563869 DIEXFQ68CQ4 756 aaKnown RBP25.27■■□□□ 1.64
SYNGR3-203ENST00000563869 PELP1Q8IZL8 1130 aaKnown RBP25.26■■□□□ 1.63
SYNGR3-203ENST00000563869 ZCRB1Q8TBF4 217 aaKnown RBP25.26■■□□□ 1.63
SYNGR3-203ENST00000563869 NLGN2Q8NFZ4 835 aa25.25■■□□□ 1.63
SYNGR3-203ENST00000563869 MEGF6O75095 1541 aa25.24■■□□□ 1.63
SYNGR3-203ENST00000563869 GIGYF1O75420 1035 aaPredicted RBP25.24■■□□□ 1.63
SYNGR3-203ENST00000563869 EIF4A2Q14240 407 aaKnown RBP25.24■■□□□ 1.63
SYNGR3-203ENST00000563869 PNNQ9H307 717 aaKnown RBP25.23■■□□□ 1.63
SYNGR3-203ENST00000563869 CCNL1Q9UK58 526 aaPredicted RBP25.23■■□□□ 1.63
SYNGR3-203ENST00000563869 COL3A1P02461 1466 aaPredicted RBP25.22■■□□□ 1.63
SYNGR3-203ENST00000563869 NCAPD2Q15021 1401 aa25.21■■□□□ 1.63
SYNGR3-203ENST00000563869 IGSF1Q8N6C5 1336 aa25.2■■□□□ 1.62
SYNGR3-203ENST00000563869 IL13P35225 146 aa25.2■■□□□ 1.62
SYNGR3-203ENST00000563869 RAPGEF4Q8WZA2 1011 aa25.2■■□□□ 1.62
SYNGR3-203ENST00000563869 GRIN3BO60391 1043 aa25.19■■□□□ 1.62
SYNGR3-203ENST00000563869 COL23A1Q86Y22 540 aaPredicted RBP25.19■■□□□ 1.62
SYNGR3-203ENST00000563869 GOLGB1Q14789 3259 aaKnown RBP25.19■■□□□ 1.62
SYNGR3-203ENST00000563869 C5P01031 1676 aa25.18■■□□□ 1.62
SYNGR3-203ENST00000563869 MSH5O43196 834 aa25.17■■□□□ 1.62
SYNGR3-203ENST00000563869 YBX3P16989 372 aaKnown RBP eCLIP25.17■■□□□ 1.621e-6■■■□□ 16.9
SYNGR3-203ENST00000563869 NBPF6Q5VWK0 638 aa25.17■■□□□ 1.62
SYNGR3-203ENST00000563869 NBPF4Q96M43 638 aa25.17■■□□□ 1.62
SYNGR3-203ENST00000563869 KDRP35968 1356 aa25.17■■□□□ 1.62
SYNGR3-203ENST00000563869 NEFMP07197 916 aa25.16■■□□□ 1.62
SYNGR3-203ENST00000563869 EYA1Q99502 592 aa25.16■■□□□ 1.62
SYNGR3-203ENST00000563869 TAF1LQ8IZX4 1826 aa25.14■■□□□ 1.62
SYNGR3-203ENST00000563869 TATP17735 454 aaPredicted RBP25.14■■□□□ 1.62
SYNGR3-203ENST00000563869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.14■■□□□ 1.62
SYNGR3-203ENST00000563869 HMGB2P26583 209 aaKnown RBP25.13■■□□□ 1.61
SYNGR3-203ENST00000563869 WDR43Q15061 677 aaKnown RBP eCLIP25.13■■□□□ 1.61
SYNGR3-203ENST00000563869 CCER2I3L3R5 266 aa25.12■■□□□ 1.61
SYNGR3-203ENST00000563869 U2SURPO15042 1029 aaKnown RBP25.12■■□□□ 1.61
SYNGR3-203ENST00000563869 FCHSD2O94868 740 aa25.11■■□□□ 1.61
SYNGR3-203ENST00000563869 AMOTQ4VCS5 1084 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms