RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 DOT1LQ8TEK3 1739 aa34.81■■■■□ 3.16
SPG7-208ENST00000563783 HSP90AB2PQ58FF8 381 aa34.8■■■■□ 3.16
SPG7-208ENST00000563783 DDX54Q8TDD1 881 aaKnown RBP34.8■■■■□ 3.16
SPG7-208ENST00000563783 HSPA5P11021 654 aaKnown RBP34.79■■■■□ 3.16
SPG7-208ENST00000563783 STK32BQ9NY57 414 aa34.79■■■■□ 3.16
SPG7-208ENST00000563783 NCAPD2Q15021 1401 aa34.79■■■■□ 3.16
SPG7-208ENST00000563783 RAPGEF4Q8WZA2 1011 aa34.78■■■■□ 3.16
SPG7-208ENST00000563783 SLC15A2Q16348 729 aa34.77■■■■□ 3.16
SPG7-208ENST00000563783 LY75O60449 1722 aa34.75■■■■□ 3.15
SPG7-208ENST00000563783 QSER1Q2KHR3 1735 aa34.74■■■■□ 3.15
SPG7-208ENST00000563783 PKD1L3Q7Z443 1732 aa34.74■■■■□ 3.15
SPG7-208ENST00000563783 WASHC2AQ641Q2 1341 aa34.74■■■■□ 3.15
SPG7-208ENST00000563783 SLC27A3Q5K4L6 730 aa34.73■■■■□ 3.15
SPG7-208ENST00000563783 EMILIN1Q9Y6C2 1016 aa34.73■■■■□ 3.15
SPG7-208ENST00000563783 NSD2O96028 1365 aa34.73■■■■□ 3.15
SPG7-208ENST00000563783 TATP17735 454 aaPredicted RBP34.72■■■■□ 3.15
SPG7-208ENST00000563783 PCDH11XQ9BZA7 1347 aa34.7■■■■□ 3.15
SPG7-208ENST00000563783 PCDH11YQ9BZA8 1340 aa34.7■■■■□ 3.15
SPG7-208ENST00000563783 PLEKHG2Q9H7P9 1386 aa34.69■■■■□ 3.14
SPG7-208ENST00000563783 USHBP1Q8N6Y0 703 aa34.68■■■■□ 3.14
SPG7-208ENST00000563783 PRIM1P49642 420 aaKnown RBP34.66■■■■□ 3.14
SPG7-208ENST00000563783 POLR3GLQ9BT43 218 aa34.65■■■■□ 3.14
SPG7-208ENST00000563783 POLKQ9UBT6 870 aa34.65■■■■□ 3.14
SPG7-208ENST00000563783 PPP1R1BQ9UD71 204 aaPredicted RBP34.65■■■■□ 3.14
SPG7-208ENST00000563783 PANK3Q9H999 370 aa34.63■■■■□ 3.13
SPG7-208ENST00000563783 LRRC4BQ9NT99 713 aa34.63■■■■□ 3.13
SPG7-208ENST00000563783 HMGB2P26583 209 aaKnown RBP34.61■■■■□ 3.13
SPG7-208ENST00000563783 SYTL4Q96C24 671 aaPredicted RBP34.61■■■■□ 3.13
SPG7-208ENST00000563783 PDGFDQ9GZP0 370 aaPredicted RBP34.61■■■■□ 3.13
SPG7-208ENST00000563783 MTFR1LQ9H019 292 aa34.61■■■■□ 3.13
SPG7-208ENST00000563783 PPM1GO15355 546 aaPredicted RBP34.6■■■■□ 3.13
SPG7-208ENST00000563783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.6■■■■□ 3.13
SPG7-208ENST00000563783 ITGB4P16144 1822 aa34.58■■■■□ 3.13
SPG7-208ENST00000563783 PTGER2P43116 358 aa34.57■■■■□ 3.12
SPG7-208ENST00000563783 AKT1S1Q96B36 256 aa34.57■■■■□ 3.12
SPG7-208ENST00000563783 COL24A1Q17RW2 1714 aa34.56■■■■□ 3.12
SPG7-208ENST00000563783 ZBTB7AO95365 584 aa34.56■■■■□ 3.12
SPG7-208ENST00000563783 EYA1Q99502 592 aa34.56■■■■□ 3.12
SPG7-208ENST00000563783 TOGARAM1Q9Y4F4 1720 aa34.55■■■■□ 3.12
SPG7-208ENST00000563783 CYP27B1O15528 508 aa34.55■■■■□ 3.12
SPG7-208ENST00000563783 ZNF827Q17R98 1081 aa34.55■■■■□ 3.12
SPG7-208ENST00000563783 TUBGCP6Q96RT7 1819 aa34.55■■■■□ 3.12
SPG7-208ENST00000563783 NKX1-1Q15270 411 aaPredicted RBP34.54■■■■□ 3.12
SPG7-208ENST00000563783 SPG7Q9UQ90 795 aa34.54■■■■□ 3.12
SPG7-208ENST00000563783 SLC16A10Q8TF71 515 aa34.53■■■■□ 3.12
SPG7-208ENST00000563783 SGIP1Q9BQI5 828 aa34.52■■■■□ 3.12
SPG7-208ENST00000563783 TAF1LQ8IZX4 1826 aa34.49■■■■□ 3.11
SPG7-208ENST00000563783 EIF4A2Q14240 407 aaKnown RBP34.49■■■■□ 3.11
SPG7-208ENST00000563783 KNSTRNQ9Y448 316 aa34.49■■■■□ 3.11
SPG7-208ENST00000563783 C5P01031 1676 aa34.49■■■■□ 3.11
SPG7-208ENST00000563783 CCNL1Q9UK58 526 aaPredicted RBP34.48■■■■□ 3.11
SPG7-208ENST00000563783 ATF5Q9Y2D1 282 aaPredicted RBP34.48■■■■□ 3.11
SPG7-208ENST00000563783 IGSF1Q8N6C5 1336 aa34.47■■■■□ 3.11
SPG7-208ENST00000563783 TNNT2P45379 298 aaPredicted RBP34.46■■■■□ 3.11
SPG7-208ENST00000563783 KIF7Q2M1P5 1343 aa34.45■■■■□ 3.11
SPG7-208ENST00000563783 MAP3K5Q99683 1374 aa34.45■■■■□ 3.11
SPG7-208ENST00000563783 DCAF8L1A6NGE4 600 aa34.44■■■■□ 3.1
SPG7-208ENST00000563783 MORC1Q86VD1 984 aa34.44■■■■□ 3.1
SPG7-208ENST00000563783 SMARCC1Q92922 1105 aaPredicted RBP34.44■■■■□ 3.1
SPG7-208ENST00000563783 PNPLA7Q6ZV29 1317 aa34.44■■■■□ 3.1
SPG7-208ENST00000563783 TFCP2L1Q9NZI6 479 aa34.43■■■■□ 3.1
SPG7-208ENST00000563783 PALLDQ8WX93 1383 aa34.42■■■■□ 3.1
SPG7-208ENST00000563783 IFNL2Q8IZJ0 200 aa34.41■■■■□ 3.1
SPG7-208ENST00000563783 MPRIPQ6WCQ1 1025 aa34.4■■■■□ 3.1
SPG7-208ENST00000563783 AMER1Q5JTC6 1135 aaPredicted RBP34.39■■■■□ 3.1
SPG7-208ENST00000563783 PHKG2P15735 406 aa34.37■■■■□ 3.09
SPG7-208ENST00000563783 KCNQ4P56696 695 aa34.37■■■■□ 3.09
SPG7-208ENST00000563783 ARXQ96QS3 562 aa34.37■■■■□ 3.09
SPG7-208ENST00000563783 PIGBQ92521 554 aa34.35■■■■□ 3.09
SPG7-208ENST00000563783 SYT17Q9BSW7 474 aa34.35■■■■□ 3.09
SPG7-208ENST00000563783 FHDC1Q9C0D6 1143 aaPredicted RBP34.35■■■■□ 3.09
SPG7-208ENST00000563783 C4BP0C0L5 1744 aa34.33■■■■□ 3.09
SPG7-208ENST00000563783 FLAD1Q8NFF5 587 aa34.33■■■■□ 3.09
SPG7-208ENST00000563783 POLD1P28340 1107 aa34.32■■■■□ 3.08
SPG7-208ENST00000563783 AMOTQ4VCS5 1084 aa34.32■■■■□ 3.08
SPG7-208ENST00000563783 TMOD3Q9NYL9 352 aa34.32■■■■□ 3.08
SPG7-208ENST00000563783 KDRP35968 1356 aa34.32■■■■□ 3.08
SPG7-208ENST00000563783 ZNF831Q5JPB2 1677 aa34.31■■■■□ 3.08
SPG7-208ENST00000563783 PER1O15534 1290 aaPredicted RBP34.31■■■■□ 3.08
SPG7-208ENST00000563783 HSP90AB1P08238 724 aaKnown RBP34.31■■■■□ 3.08
SPG7-208ENST00000563783 PLEKHO1Q53GL0 409 aaPredicted RBP34.3■■■■□ 3.08
SPG7-208ENST00000563783 NPC1L1Q9UHC9 1359 aa34.3■■■■□ 3.08
SPG7-208ENST00000563783 UBR3Q6ZT12 1888 aa34.3■■■■□ 3.08
SPG7-208ENST00000563783 ERVV-2B6SEH9 535 aa34.27■■■■□ 3.08
SPG7-208ENST00000563783 DCAF5Q96JK2 942 aa34.27■■■■□ 3.08
SPG7-208ENST00000563783 COL23A1Q86Y22 540 aaPredicted RBP34.25■■■■□ 3.07
SPG7-208ENST00000563783 LOC102724428A0A0B4J2F2 783 aa34.24■■■■□ 3.07
SPG7-208ENST00000563783 IL13P35225 146 aa34.24■■■■□ 3.07
SPG7-208ENST00000563783 SIK1P57059 783 aa34.24■■■■□ 3.07
SPG7-208ENST00000563783 CHD4Q14839 1912 aa34.22■■■■□ 3.07
SPG7-208ENST00000563783 ZNF530Q6P9A1 599 aaPredicted RBP34.2■■■■□ 3.07
SPG7-208ENST00000563783 YY1P25490 414 aa34.19■■■■□ 3.06
SPG7-208ENST00000563783 AK7Q96M32 723 aa34.19■■■■□ 3.06
SPG7-208ENST00000563783 AEBP1Q8IUX7 1158 aa34.18■■■■□ 3.06
SPG7-208ENST00000563783 ASAP1Q9ULH1 1129 aa34.18■■■■□ 3.06
SPG7-208ENST00000563783 KDM6AO15550 1401 aaPredicted RBP34.18■■■■□ 3.06
SPG7-208ENST00000563783 SCN11AQ9UI33 1791 aa34.18■■■■□ 3.06
SPG7-208ENST00000563783 MTHFSP49914 203 aa34.17■■■■□ 3.06
SPG7-208ENST00000563783 SULT6B1Q6IMI4 303 aa34.17■■■■□ 3.06
SPG7-208ENST00000563783 ATG3Q9NT62 314 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms