RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 BRWD3Q6RI45 1802 aa20.37■□□□□ 0.85
PDXDC1-209ENST00000563667 BARGINQ6ZT62 677 aa20.37■□□□□ 0.85
PDXDC1-209ENST00000563667 USHBP1Q8N6Y0 703 aa20.37■□□□□ 0.85
PDXDC1-209ENST00000563667 NBPF6Q5VWK0 638 aa20.36■□□□□ 0.85
PDXDC1-209ENST00000563667 NBPF4Q96M43 638 aa20.36■□□□□ 0.85
PDXDC1-209ENST00000563667 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
PDXDC1-209ENST00000563667 CRB1P82279 1406 aa20.36■□□□□ 0.85
PDXDC1-209ENST00000563667 ERBB3P21860 1342 aa20.35■□□□□ 0.85
PDXDC1-209ENST00000563667 FAM182BQ5T319 152 aa20.35■□□□□ 0.85
PDXDC1-209ENST00000563667 NLRP2Q9NX02 1062 aa20.35■□□□□ 0.85
PDXDC1-209ENST00000563667 THRAP3Q9Y2W1 955 aaKnown RBP20.35■□□□□ 0.85
PDXDC1-209ENST00000563667 ABCC6O95255 1503 aa20.35■□□□□ 0.85
PDXDC1-209ENST00000563667 COL18A1P39060 1754 aa20.35■□□□□ 0.85
PDXDC1-209ENST00000563667 RGPD5Q99666 1765 aa20.34■□□□□ 0.85
PDXDC1-209ENST00000563667 SRCAPQ6ZRS2 3230 aa20.34■□□□□ 0.85
PDXDC1-209ENST00000563667 PDE3BQ13370 1112 aa20.34■□□□□ 0.85
PDXDC1-209ENST00000563667 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
PDXDC1-209ENST00000563667 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
PDXDC1-209ENST00000563667 THSD7AQ9UPZ6 1657 aa20.33■□□□□ 0.85
PDXDC1-209ENST00000563667 TMPOP42166 694 aaKnown RBP20.33■□□□□ 0.85
PDXDC1-209ENST00000563667 WDR17Q8IZU2 1322 aa20.32■□□□□ 0.84
PDXDC1-209ENST00000563667 RIPK4P57078 832 aa20.31■□□□□ 0.84
PDXDC1-209ENST00000563667 NFE2L2Q16236 605 aa20.31■□□□□ 0.84
PDXDC1-209ENST00000563667 KDRP35968 1356 aa20.31■□□□□ 0.84
PDXDC1-209ENST00000563667 RGPD2P0DJD1 1756 aa20.29■□□□□ 0.84
PDXDC1-209ENST00000563667 FAM196AQ6ZSG2 479 aa20.28■□□□□ 0.84
PDXDC1-209ENST00000563667 DEFB132Q7Z7B7 95 aa20.28■□□□□ 0.84
PDXDC1-209ENST00000563667 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
PDXDC1-209ENST00000563667 WWC1Q8IX03 1113 aa20.27■□□□□ 0.84
PDXDC1-209ENST00000563667 BAG6P46379 1132 aa20.26■□□□□ 0.83
PDXDC1-209ENST00000563667 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
PDXDC1-209ENST00000563667 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
PDXDC1-209ENST00000563667 CARD10Q9BWT7 1032 aa20.26■□□□□ 0.83
PDXDC1-209ENST00000563667 DDB1Q16531 1140 aa20.25■□□□□ 0.83
PDXDC1-209ENST00000563667 MTHFSDQ2M296 383 aaKnown RBP20.25■□□□□ 0.83
PDXDC1-209ENST00000563667 GAS2L2Q8NHY3 880 aa20.25■□□□□ 0.83
PDXDC1-209ENST00000563667 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
PDXDC1-209ENST00000563667 CDCA7LQ96GN5 454 aa20.25■□□□□ 0.83
PDXDC1-209ENST00000563667 ZNF521Q96K83 1311 aa20.25■□□□□ 0.83
PDXDC1-209ENST00000563667 FAM208AQ9UK61 1670 aaKnown RBP20.24■□□□□ 0.83
PDXDC1-209ENST00000563667 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
PDXDC1-209ENST00000563667 CDCA7Q9BWT1 371 aaPredicted RBP20.24■□□□□ 0.83
PDXDC1-209ENST00000563667 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
PDXDC1-209ENST00000563667 TRIM37O94972 964 aa20.23■□□□□ 0.83
PDXDC1-209ENST00000563667 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
PDXDC1-209ENST00000563667 NCAPD2Q15021 1401 aa20.23■□□□□ 0.83
PDXDC1-209ENST00000563667 PLEKHO1Q53GL0 409 aaPredicted RBP20.23■□□□□ 0.83
PDXDC1-209ENST00000563667 WDR63Q8IWG1 891 aa20.22■□□□□ 0.83
PDXDC1-209ENST00000563667 AMOTQ4VCS5 1084 aa20.2■□□□□ 0.82
PDXDC1-209ENST00000563667 PARP4Q9UKK3 1724 aaKnown RBP20.19■□□□□ 0.82
PDXDC1-209ENST00000563667 EXOC5O00471 708 aa20.19■□□□□ 0.82
PDXDC1-209ENST00000563667 EN1Q05925 392 aaPredicted RBP20.19■□□□□ 0.82
PDXDC1-209ENST00000563667 RTF1Q92541 710 aaKnown RBP20.19■□□□□ 0.82
PDXDC1-209ENST00000563667 E9PSI1 815 aa20.18■□□□□ 0.82
PDXDC1-209ENST00000563667 APBA3O96018 575 aa20.18■□□□□ 0.82
PDXDC1-209ENST00000563667 SLFN5Q08AF3 891 aa20.18■□□□□ 0.82
PDXDC1-209ENST00000563667 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
PDXDC1-209ENST00000563667 OVOS2A0A0G2JMS6 1433 aa20.18■□□□□ 0.82
PDXDC1-209ENST00000563667 LRRC37A3O60309 1634 aa20.17■□□□□ 0.82
PDXDC1-209ENST00000563667 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
PDXDC1-209ENST00000563667 DCTN1Q14203 1278 aa20.17■□□□□ 0.82
PDXDC1-209ENST00000563667 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
PDXDC1-209ENST00000563667 SPG7Q9UQ90 795 aa20.17■□□□□ 0.82
PDXDC1-209ENST00000563667 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
PDXDC1-209ENST00000563667 IL2RBP14784 551 aa20.16■□□□□ 0.82
PDXDC1-209ENST00000563667 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
PDXDC1-209ENST00000563667 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
PDXDC1-209ENST00000563667 MCM10Q7L590 875 aa20.15■□□□□ 0.82
PDXDC1-209ENST00000563667 LAS1LQ9Y4W2 734 aaKnown RBP20.15■□□□□ 0.82
PDXDC1-209ENST00000563667 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
PDXDC1-209ENST00000563667 DISP2A7MBM2 1401 aa20.15■□□□□ 0.82
PDXDC1-209ENST00000563667 MEGF6O75095 1541 aa20.15■□□□□ 0.82
PDXDC1-209ENST00000563667 EP400Q96L91 3159 aa20.14■□□□□ 0.82
PDXDC1-209ENST00000563667 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.81
PDXDC1-209ENST00000563667 IL16Q14005 1332 aa20.14■□□□□ 0.81
PDXDC1-209ENST00000563667 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
PDXDC1-209ENST00000563667 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
PDXDC1-209ENST00000563667 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.81
PDXDC1-209ENST00000563667 EZH2Q15910 746 aaKnown RBP20.13■□□□□ 0.81
PDXDC1-209ENST00000563667 AKAP4Q5JQC9 854 aa20.13■□□□□ 0.81
PDXDC1-209ENST00000563667 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
PDXDC1-209ENST00000563667 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
PDXDC1-209ENST00000563667 TRMT2AQ8IZ69 625 aaKnown RBP20.12■□□□□ 0.81
PDXDC1-209ENST00000563667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.12■□□□□ 0.816e-13■■■□□ 19
PDXDC1-209ENST00000563667 TNS2Q63HR2 1409 aa20.11■□□□□ 0.81
PDXDC1-209ENST00000563667 TNS1Q9HBL0 1735 aaKnown RBP20.1■□□□□ 0.81
PDXDC1-209ENST00000563667 GNAI1P63096 354 aa20.1■□□□□ 0.81
PDXDC1-209ENST00000563667 ZCRB1Q8TBF4 217 aaKnown RBP20.1■□□□□ 0.81
PDXDC1-209ENST00000563667 PLEKHG2Q9H7P9 1386 aa20.09■□□□□ 0.81
PDXDC1-209ENST00000563667 TSR2Q969E8 191 aaKnown RBP20.09■□□□□ 0.81
PDXDC1-209ENST00000563667 CAMKK2Q96RR4 588 aa20.09■□□□□ 0.81
PDXDC1-209ENST00000563667 MPRIPQ6WCQ1 1025 aa20.08■□□□□ 0.81
PDXDC1-209ENST00000563667 IFNL2Q8IZJ0 200 aa20.08■□□□□ 0.81
PDXDC1-209ENST00000563667 IL17REQ8NFR9 667 aa20.08■□□□□ 0.81
PDXDC1-209ENST00000563667 IFT57Q9NWB7 429 aa20.08■□□□□ 0.81
PDXDC1-209ENST00000563667 FANCIQ9NVI1 1328 aa20.07■□□□□ 0.8
PDXDC1-209ENST00000563667 PHKG2P15735 406 aa20.07■□□□□ 0.8
PDXDC1-209ENST00000563667 PSDA5PKW4 1024 aaPredicted RBP20.06■□□□□ 0.8
PDXDC1-209ENST00000563667 CFAP44Q96MT7 982 aa20.06■□□□□ 0.8
PDXDC1-209ENST00000563667 BCL11BQ9C0K0 894 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms