RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 PHACTR3Q96KR7 559 aa24.92■■□□□ 1.58
FANCA-212ENST00000563513 OVOS2A0A0G2JMS6 1433 aa24.92■■□□□ 1.58
FANCA-212ENST00000563513 THSD7AQ9UPZ6 1657 aa24.91■■□□□ 1.58
FANCA-212ENST00000563513 SEPT12Q8IYM1 358 aa24.91■■□□□ 1.58
FANCA-212ENST00000563513 FAM9BQ8IZU0 186 aa24.9■■□□□ 1.58
FANCA-212ENST00000563513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.88■■□□□ 1.579e-7■■■□□ 17.2
FANCA-212ENST00000563513 PLEKHG2Q9H7P9 1386 aa24.88■■□□□ 1.57
FANCA-212ENST00000563513 PARP4Q9UKK3 1724 aaKnown RBP24.87■■□□□ 1.57
FANCA-212ENST00000563513 EXOC5O00471 708 aa24.87■■□□□ 1.57
FANCA-212ENST00000563513 CCDC146Q8IYE0 955 aa24.87■■□□□ 1.57
FANCA-212ENST00000563513 ZCRB1Q8TBF4 217 aaKnown RBP24.87■■□□□ 1.57
FANCA-212ENST00000563513 DDB1Q16531 1140 aa24.86■■□□□ 1.57
FANCA-212ENST00000563513 MTHFSDQ2M296 383 aaKnown RBP24.86■■□□□ 1.57
FANCA-212ENST00000563513 PLEKHO1Q53GL0 409 aaPredicted RBP24.86■■□□□ 1.57
FANCA-212ENST00000563513 PNNQ9H307 717 aaKnown RBP24.85■■□□□ 1.57
FANCA-212ENST00000563513 LRRC37A3O60309 1634 aa24.85■■□□□ 1.57
FANCA-212ENST00000563513 RGS12O14924 1447 aa24.85■■□□□ 1.57
FANCA-212ENST00000563513 A0A0G2JS52 829 aa24.84■■□□□ 1.57
FANCA-212ENST00000563513 MYT1Q01538 1121 aa24.84■■□□□ 1.57
FANCA-212ENST00000563513 AMOTQ4VCS5 1084 aa24.84■■□□□ 1.57
FANCA-212ENST00000563513 RUNDC1Q96C34 613 aa24.84■■□□□ 1.57
FANCA-212ENST00000563513 PKD1L3Q7Z443 1732 aa24.83■■□□□ 1.57
FANCA-212ENST00000563513 CYP27B1O15528 508 aa24.83■■□□□ 1.57
FANCA-212ENST00000563513 SPG7Q9UQ90 795 aa24.83■■□□□ 1.57
FANCA-212ENST00000563513 TNS2Q63HR2 1409 aa24.83■■□□□ 1.57
FANCA-212ENST00000563513 SHANK3Q9BYB0 1731 aa24.83■■□□□ 1.57
FANCA-212ENST00000563513 MARCH10Q8NA82 808 aaPredicted RBP24.81■■□□□ 1.56
FANCA-212ENST00000563513 DDX54Q8TDD1 881 aaKnown RBP24.8■■□□□ 1.56
FANCA-212ENST00000563513 BRWD3Q6RI45 1802 aa24.79■■□□□ 1.56
FANCA-212ENST00000563513 PHKG2P15735 406 aa24.79■■□□□ 1.56
FANCA-212ENST00000563513 PDE3BQ13370 1112 aa24.78■■□□□ 1.56
FANCA-212ENST00000563513 ZNF530Q6P9A1 599 aaPredicted RBP24.78■■□□□ 1.56
FANCA-212ENST00000563513 GAS2L2Q8NHY3 880 aa24.78■■□□□ 1.56
FANCA-212ENST00000563513 PCDH11XQ9BZA7 1347 aa24.78■■□□□ 1.56
FANCA-212ENST00000563513 PCDH11YQ9BZA8 1340 aa24.78■■□□□ 1.56
FANCA-212ENST00000563513 MAPK8IP3Q9UPT6 1336 aa24.78■■□□□ 1.56
FANCA-212ENST00000563513 APAF1O14727 1248 aa24.77■■□□□ 1.56
FANCA-212ENST00000563513 KRT27Q7Z3Y8 459 aa24.77■■□□□ 1.56
FANCA-212ENST00000563513 IFNL2Q8IZJ0 200 aa24.77■■□□□ 1.56
FANCA-212ENST00000563513 NEFMP07197 916 aa24.76■■□□□ 1.55
FANCA-212ENST00000563513 TMPOP42166 694 aaKnown RBP24.76■■□□□ 1.55
FANCA-212ENST00000563513 NKX1-1Q15270 411 aaPredicted RBP24.76■■□□□ 1.55
FANCA-212ENST00000563513 NFE2L2Q16236 605 aa24.76■■□□□ 1.55
FANCA-212ENST00000563513 AKAP4Q5JQC9 854 aa24.75■■□□□ 1.55
FANCA-212ENST00000563513 FAM182BQ5T319 152 aa24.75■■□□□ 1.55
FANCA-212ENST00000563513 RRP7AQ9Y3A4 280 aaKnown RBP24.74■■□□□ 1.55
FANCA-212ENST00000563513 SENP3-EIF4A1A0A087X0R7 540 aa24.73■■□□□ 1.55
FANCA-212ENST00000563513 RIPK4P57078 832 aa24.72■■□□□ 1.55
FANCA-212ENST00000563513 C1orf141Q5JVX7 400 aa24.72■■□□□ 1.55
FANCA-212ENST00000563513 GNAT3A8MTJ3 354 aa24.71■■□□□ 1.55
FANCA-212ENST00000563513 LGR6Q9HBX8 967 aa24.71■■□□□ 1.55
FANCA-212ENST00000563513 MPRIPQ6WCQ1 1025 aa24.7■■□□□ 1.54
FANCA-212ENST00000563513 IL17REQ8NFR9 667 aa24.7■■□□□ 1.54
FANCA-212ENST00000563513 KDM6AO15550 1401 aaPredicted RBP24.69■■□□□ 1.54
FANCA-212ENST00000563513 MAP3K5Q99683 1374 aa24.69■■□□□ 1.54
FANCA-212ENST00000563513 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
FANCA-212ENST00000563513 TRIM35Q9UPQ4 493 aa24.69■■□□□ 1.54
FANCA-212ENST00000563513 BCL9O00512 1426 aa24.69■■□□□ 1.54
FANCA-212ENST00000563513 DLG5Q8TDM6 1919 aa24.69■■□□□ 1.54
FANCA-212ENST00000563513 HSP90AB1P08238 724 aaKnown RBP24.68■■□□□ 1.54
FANCA-212ENST00000563513 RNMTO43148 476 aaKnown RBP24.67■■□□□ 1.54
FANCA-212ENST00000563513 HTATSF1O43719 755 aaKnown RBP24.67■■□□□ 1.54
FANCA-212ENST00000563513 DCTN1Q14203 1278 aa24.67■■□□□ 1.54
FANCA-212ENST00000563513 DCAF5Q96JK2 942 aa24.67■■□□□ 1.54
FANCA-212ENST00000563513 NCBP3Q53F19 620 aaKnown RBP24.66■■□□□ 1.54
FANCA-212ENST00000563513 FAM196AQ6ZSG2 479 aa24.65■■□□□ 1.54
FANCA-212ENST00000563513 MCM10Q7L590 875 aa24.65■■□□□ 1.54
FANCA-212ENST00000563513 ADAMTS7Q9UKP4 1686 aa24.65■■□□□ 1.54
FANCA-212ENST00000563513 CEMIPQ8WUJ3 1361 aa24.64■■□□□ 1.53
FANCA-212ENST00000563513 ILDR2Q71H61 639 aa24.63■■□□□ 1.53
FANCA-212ENST00000563513 ACSBG1Q96GR2 724 aa24.63■■□□□ 1.53
FANCA-212ENST00000563513 THUMPD2Q9BTF0 503 aaKnown RBP24.63■■□□□ 1.53
FANCA-212ENST00000563513 TOGARAM1Q9Y4F4 1720 aa24.63■■□□□ 1.53
FANCA-212ENST00000563513 KCNQ2O43526 872 aa24.62■■□□□ 1.53
FANCA-212ENST00000563513 CCDC27Q2M243 656 aa24.62■■□□□ 1.53
FANCA-212ENST00000563513 RTF1Q92541 710 aaKnown RBP24.62■■□□□ 1.53
FANCA-212ENST00000563513 SALL2Q9Y467 1007 aaPredicted RBP24.62■■□□□ 1.53
FANCA-212ENST00000563513 SCN11AQ9UI33 1791 aa24.62■■□□□ 1.53
FANCA-212ENST00000563513 ERVV-2B6SEH9 535 aa24.61■■□□□ 1.53
FANCA-212ENST00000563513 PRIM1P49642 420 aaKnown RBP24.61■■□□□ 1.53
FANCA-212ENST00000563513 PTF1AQ7RTS3 328 aa24.61■■□□□ 1.53
FANCA-212ENST00000563513 LMOD3Q0VAK6 560 aa24.59■■□□□ 1.53
FANCA-212ENST00000563513 WWC1Q8IX03 1113 aa24.59■■□□□ 1.53
FANCA-212ENST00000563513 VIRMAQ69YN4 1812 aaKnown RBP24.58■■□□□ 1.53
FANCA-212ENST00000563513 SBF2Q86WG5 1849 aa24.58■■□□□ 1.53
FANCA-212ENST00000563513 NGEFQ8N5V2 710 aa24.58■■□□□ 1.53
FANCA-212ENST00000563513 NFATC2IPQ8NCF5 419 aa24.58■■□□□ 1.53
FANCA-212ENST00000563513 SLC52A2Q9HAB3 445 aa24.58■■□□□ 1.53
FANCA-212ENST00000563513 EP400Q96L91 3159 aa24.58■■□□□ 1.52
FANCA-212ENST00000563513 DOT1LQ8TEK3 1739 aa24.58■■□□□ 1.52
FANCA-212ENST00000563513 CABP4P57796 275 aa24.56■■□□□ 1.52
FANCA-212ENST00000563513 PIGBQ92521 554 aa24.56■■□□□ 1.52
FANCA-212ENST00000563513 MRC1P22897 1456 aa24.56■■□□□ 1.52
FANCA-212ENST00000563513 ZNF521Q96K83 1311 aa24.56■■□□□ 1.52
FANCA-212ENST00000563513 TRIM37O94972 964 aa24.55■■□□□ 1.52
FANCA-212ENST00000563513 SYTL4Q96C24 671 aaPredicted RBP24.55■■□□□ 1.52
FANCA-212ENST00000563513 BCL11BQ9C0K0 894 aaPredicted RBP24.55■■□□□ 1.52
FANCA-212ENST00000563513 ITGB4P16144 1822 aa24.55■■□□□ 1.52
FANCA-212ENST00000563513 KAT6BQ8WYB5 2073 aa24.54■■□□□ 1.52
FANCA-212ENST00000563513 HNRNPUQ00839 825 aaKnown RBP eCLIP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms