RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 NALCNQ8IZF0 1738 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 ROBO1Q9Y6N7 1651 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 MYOM2P54296 1465 aa8.38□□□□□ -1.07
CDH13-206ENST00000562601 NRXN1Q9ULB1 1477 aa8.38□□□□□ -1.07
CDH13-206ENST00000562601 OATP04181 439 aa8.38□□□□□ -1.07
CDH13-206ENST00000562601 PLEKHH1Q9ULM0 1364 aa8.37□□□□□ -1.07
CDH13-206ENST00000562601 SAFB2Q14151 953 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDH13-206ENST00000562601 WNT2BQ93097 391 aa8.37□□□□□ -1.07
CDH13-206ENST00000562601 L3MBTL2Q969R5 705 aa8.37□□□□□ -1.07
CDH13-206ENST00000562601 ZFRQ96KR1 1074 aaKnown RBP8.37□□□□□ -1.07
CDH13-206ENST00000562601 YTHDC2Q9H6S0 1430 aaKnown RBP8.37□□□□□ -1.07
CDH13-206ENST00000562601 NCOA3Q9Y6Q9 1424 aa8.37□□□□□ -1.07
CDH13-206ENST00000562601 LRPPRCP42704 1394 aaKnown RBP8.36□□□□□ -1.07
CDH13-206ENST00000562601 MAP2K5Q13163 448 aa8.36□□□□□ -1.07
CDH13-206ENST00000562601 KCTD12Q96CX2 325 aaKnown RBP8.36□□□□□ -1.07
CDH13-206ENST00000562601 TRAK1Q9UPV9 953 aa8.36□□□□□ -1.07
CDH13-206ENST00000562601 ADGRG1Q9Y653 693 aa8.36□□□□□ -1.07
CDH13-206ENST00000562601 PTCH1Q13635 1447 aa8.36□□□□□ -1.07
CDH13-206ENST00000562601 LAMC1P11047 1609 aa8.36□□□□□ -1.07
CDH13-206ENST00000562601 KNDC1Q76NI1 1749 aa8.35□□□□□ -1.07
CDH13-206ENST00000562601 SMAPO00193 183 aa8.35□□□□□ -1.07
CDH13-206ENST00000562601 SLC4A3P48751 1232 aa8.35□□□□□ -1.07
CDH13-206ENST00000562601 ZC3H15Q8WU90 426 aaKnown RBP8.35□□□□□ -1.07
CDH13-206ENST00000562601 FAM135BQ49AJ0 1406 aa8.35□□□□□ -1.07
CDH13-206ENST00000562601 ADGRL3Q9HAR2 1447 aa8.35□□□□□ -1.07
CDH13-206ENST00000562601 ABCC11Q96J66 1382 aa8.35□□□□□ -1.07
CDH13-206ENST00000562601 PHLPP1O60346 1717 aa8.34□□□□□ -1.07
CDH13-206ENST00000562601 NBPF1Q3BBV0 1214 aa8.34□□□□□ -1.07
CDH13-206ENST00000562601 DDX17Q92841 729 aaKnown RBP8.34□□□□□ -1.07
CDH13-206ENST00000562601 LRCH3Q96II8 777 aa8.34□□□□□ -1.07
CDH13-206ENST00000562601 PRAM1Q96QH2 718 aa8.34□□□□□ -1.07
CDH13-206ENST00000562601 EYA1Q99502 592 aa8.34□□□□□ -1.07
CDH13-206ENST00000562601 POGKQ9P215 609 aa8.34□□□□□ -1.07
CDH13-206ENST00000562601 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
CDH13-206ENST00000562601 MINK1Q8N4C8 1332 aaPredicted RBP8.33□□□□□ -1.08
CDH13-206ENST00000562601 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.33□□□□□ -1.08
CDH13-206ENST00000562601 TECPR2O15040 1411 aa8.33□□□□□ -1.08
CDH13-206ENST00000562601 FECHP22830 423 aa8.33□□□□□ -1.08
CDH13-206ENST00000562601 DNAJB2P25686 324 aa8.33□□□□□ -1.08
CDH13-206ENST00000562601 MST1RQ04912 1400 aa8.33□□□□□ -1.08
CDH13-206ENST00000562601 BRINP3Q76B58 766 aa8.33□□□□□ -1.08
CDH13-206ENST00000562601 NECTIN2Q92692 538 aa8.33□□□□□ -1.08
CDH13-206ENST00000562601 HIRIP3Q9BW71 556 aaPredicted RBP8.33□□□□□ -1.08
CDH13-206ENST00000562601 RGPD8O14715 1765 aaPredicted RBP8.33□□□□□ -1.08
CDH13-206ENST00000562601 PRAG1Q86YV5 1406 aa8.32□□□□□ -1.08
CDH13-206ENST00000562601 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
CDH13-206ENST00000562601 ZMYND10O75800 440 aa8.32□□□□□ -1.08
CDH13-206ENST00000562601 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
CDH13-206ENST00000562601 KRI1Q8N9T8 703 aaKnown RBP8.32□□□□□ -1.08
CDH13-206ENST00000562601 PXYLP1Q8TE99 480 aa8.32□□□□□ -1.08
CDH13-206ENST00000562601 ORAI2Q96SN7 254 aa8.32□□□□□ -1.08
CDH13-206ENST00000562601 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.32□□□□□ -1.08
CDH13-206ENST00000562601 HCSTQ9UBK5 93 aa8.32□□□□□ -1.08
CDH13-206ENST00000562601 DCCP43146 1447 aa8.31□□□□□ -1.08
CDH13-206ENST00000562601 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
CDH13-206ENST00000562601 NBPF8Q3BBV2 869 aa8.31□□□□□ -1.08
CDH13-206ENST00000562601 BARGINQ6ZT62 677 aa8.31□□□□□ -1.08
CDH13-206ENST00000562601 METTL3Q86U44 580 aaKnown RBP8.31□□□□□ -1.08
CDH13-206ENST00000562601 ARHGEF28Q8N1W1 1705 aaKnown RBP8.31□□□□□ -1.08
CDH13-206ENST00000562601 KIAA1210Q9ULL0 1709 aa8.31□□□□□ -1.08
CDH13-206ENST00000562601 C1orf167Q5SNV9 1468 aa8.31□□□□□ -1.08
CDH13-206ENST00000562601 IRF6O14896 467 aa8.3□□□□□ -1.08
CDH13-206ENST00000562601 ESCO1Q5FWF5 840 aa8.3□□□□□ -1.08
CDH13-206ENST00000562601 SLF2Q8IX21 1173 aa8.3□□□□□ -1.08
CDH13-206ENST00000562601 SIRT1Q96EB6 747 aa8.3□□□□□ -1.08
CDH13-206ENST00000562601 TONSLQ96HA7 1378 aa8.3□□□□□ -1.08
CDH13-206ENST00000562601 DLC1Q96QB1 1528 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 TRPM1Q7Z4N2 1603 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 FMN2Q9NZ56 1722 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 RCCD1A6NED2 376 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 FAM161AQ3B820 660 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 NYAP1Q6ZVC0 841 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 SAMD7Q7Z3H4 446 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 DISP3Q9P2K9 1392 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 CDC42BPGQ6DT37 1551 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 COL16A1Q07092 1604 aaPredicted RBP8.29□□□□□ -1.08
CDH13-206ENST00000562601 NHSL1Q5SYE7 1610 aa8.29□□□□□ -1.08
CDH13-206ENST00000562601 XPCQ01831 940 aaPredicted RBP8.28□□□□□ -1.08
CDH13-206ENST00000562601 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
CDH13-206ENST00000562601 TMEM134Q9H6X4 195 aa8.28□□□□□ -1.08
CDH13-206ENST00000562601 TSR3Q9UJK0 312 aaKnown RBP8.28□□□□□ -1.08
CDH13-206ENST00000562601 AHDC1Q5TGY3 1603 aaPredicted RBP8.28□□□□□ -1.08
CDH13-206ENST00000562601 MED1Q15648 1581 aaPredicted RBP8.27□□□□□ -1.09
CDH13-206ENST00000562601 RNF40O75150 1001 aa8.27□□□□□ -1.09
CDH13-206ENST00000562601 BCAMP50895 628 aa8.27□□□□□ -1.09
CDH13-206ENST00000562601 PTPN5P54829 565 aa8.27□□□□□ -1.09
CDH13-206ENST00000562601 SWT1Q5T5J6 900 aaKnown RBP8.27□□□□□ -1.09
CDH13-206ENST00000562601 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
CDH13-206ENST00000562601 ROCK2O75116 1388 aaKnown RBP8.26□□□□□ -1.09
CDH13-206ENST00000562601 USP32Q8NFA0 1604 aa8.26□□□□□ -1.09
CDH13-206ENST00000562601 NUTM2BA6NNL0 878 aaPredicted RBP8.26□□□□□ -1.09
CDH13-206ENST00000562601 NUTM2EB1AL46 878 aaPredicted RBP8.26□□□□□ -1.09
CDH13-206ENST00000562601 FOXO3O43524 673 aa8.26□□□□□ -1.09
CDH13-206ENST00000562601 PPP4CP60510 307 aa8.26□□□□□ -1.09
CDH13-206ENST00000562601 NUTM2AQ8IVF1 878 aaPredicted RBP8.26□□□□□ -1.09
CDH13-206ENST00000562601 PMFBP1Q8TBY8 1022 aa8.26□□□□□ -1.09
CDH13-206ENST00000562601 HPS5Q9UPZ3 1129 aa8.26□□□□□ -1.09
CDH13-206ENST00000562601 JCADQ9P266 1359 aa8.25□□□□□ -1.09
CDH13-206ENST00000562601 QRICH2Q9H0J4 1663 aa8.25□□□□□ -1.09
CDH13-206ENST00000562601 WASLO00401 505 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms