RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 STK32BQ9NY57 414 aa10.41□□□□□ -0.74
CNEP1R1-204ENST00000562576 GPRASP1Q5JY77 1395 aa10.4□□□□□ -0.74
CNEP1R1-204ENST00000562576 DLC1Q96QB1 1528 aa10.4□□□□□ -0.74
CNEP1R1-204ENST00000562576 YBX3P16989 372 aaKnown RBP eCLIP10.4□□□□□ -0.74
CNEP1R1-204ENST00000562576 NGDNQ8NEJ9 315 aaKnown RBP10.4□□□□□ -0.74
CNEP1R1-204ENST00000562576 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
CNEP1R1-204ENST00000562576 SBF2Q86WG5 1849 aa10.4□□□□□ -0.75
CNEP1R1-204ENST00000562576 HSPA6P17066 643 aa10.39□□□□□ -0.75
CNEP1R1-204ENST00000562576 ZNF526Q8TF50 670 aaPredicted RBP10.39□□□□□ -0.75
CNEP1R1-204ENST00000562576 C14orf93Q9H972 538 aaKnown RBP10.39□□□□□ -0.75
CNEP1R1-204ENST00000562576 PIK3C2GO75747 1445 aa10.39□□□□□ -0.75
CNEP1R1-204ENST00000562576 SPATA31E1Q6ZUB1 1445 aa10.39□□□□□ -0.75
CNEP1R1-204ENST00000562576 ZNF827Q17R98 1081 aa10.38□□□□□ -0.75
CNEP1R1-204ENST00000562576 COL13A1Q5TAT6 717 aaPredicted RBP10.38□□□□□ -0.75
CNEP1R1-204ENST00000562576 POGKQ9P215 609 aa10.38□□□□□ -0.75
CNEP1R1-204ENST00000562576 PHRF1Q9P1Y6 1649 aaKnown RBP10.37□□□□□ -0.75
CNEP1R1-204ENST00000562576 ZBTB7CA1YPR0 619 aa10.37□□□□□ -0.75
CNEP1R1-204ENST00000562576 ANKARQ7Z5J8 1434 aa10.37□□□□□ -0.75
CNEP1R1-204ENST00000562576 ATP10DQ9P241 1426 aa10.37□□□□□ -0.75
CNEP1R1-204ENST00000562576 OVOS2A0A0G2JMS6 1433 aa10.36□□□□□ -0.75
CNEP1R1-204ENST00000562576 OVOS2A0A0J9YW53 1432 aa10.36□□□□□ -0.75
CNEP1R1-204ENST00000562576 OVOS2Q6IE36 1432 aa10.36□□□□□ -0.75
CNEP1R1-204ENST00000562576 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
CNEP1R1-204ENST00000562576 TRAK1Q9UPV9 953 aa10.36□□□□□ -0.75
CNEP1R1-204ENST00000562576 ATP7BP35670 1465 aa10.36□□□□□ -0.75
CNEP1R1-204ENST00000562576 PARP4Q9UKK3 1724 aaKnown RBP10.36□□□□□ -0.75
CNEP1R1-204ENST00000562576 LMO7Q8WWI1 1683 aa10.35□□□□□ -0.75
CNEP1R1-204ENST00000562576 WASLO00401 505 aaPredicted RBP10.35□□□□□ -0.75
CNEP1R1-204ENST00000562576 DDB1Q16531 1140 aa10.35□□□□□ -0.75
CNEP1R1-204ENST00000562576 DNAJC5GQ8N7S2 189 aa10.35□□□□□ -0.75
CNEP1R1-204ENST00000562576 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
CNEP1R1-204ENST00000562576 DHX57Q6P158 1386 aaKnown RBP10.35□□□□□ -0.75
CNEP1R1-204ENST00000562576 EMP3P54852 163 aa10.34□□□□□ -0.75
CNEP1R1-204ENST00000562576 KCNQ4P56696 695 aa10.34□□□□□ -0.75
CNEP1R1-204ENST00000562576 LRRC4BQ9NT99 713 aa10.34□□□□□ -0.75
CNEP1R1-204ENST00000562576 THRAP3Q9Y2W1 955 aaKnown RBP10.34□□□□□ -0.75
CNEP1R1-204ENST00000562576 MAP3K5Q99683 1374 aa10.34□□□□□ -0.75
CNEP1R1-204ENST00000562576 RGPD3A6NKT7 1758 aaPredicted RBP10.34□□□□□ -0.75
CNEP1R1-204ENST00000562576 RGPD4Q7Z3J3 1758 aa10.34□□□□□ -0.75
CNEP1R1-204ENST00000562576 LRRC37A3O60309 1634 aa10.33□□□□□ -0.76
CNEP1R1-204ENST00000562576 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
CNEP1R1-204ENST00000562576 ACSBG1Q96GR2 724 aa10.33□□□□□ -0.76
CNEP1R1-204ENST00000562576 AXIN2Q9Y2T1 843 aa10.33□□□□□ -0.76
CNEP1R1-204ENST00000562576 ANKRD30BQ9BXX2 1392 aa10.33□□□□□ -0.76
CNEP1R1-204ENST00000562576 COL5A2P05997 1499 aaPredicted RBP10.33□□□□□ -0.76
CNEP1R1-204ENST00000562576 HTRA3P83110 453 aa10.32□□□□□ -0.76
CNEP1R1-204ENST00000562576 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
CNEP1R1-204ENST00000562576 NUDT16Q96DE0 195 aaKnown RBP10.32□□□□□ -0.76
CNEP1R1-204ENST00000562576 GCP02774 474 aa10.31□□□□□ -0.76
CNEP1R1-204ENST00000562576 ABTB2Q8N961 1025 aa10.31□□□□□ -0.76
CNEP1R1-204ENST00000562576 GPBP1L1Q9HC44 474 aaPredicted RBP10.31□□□□□ -0.76
CNEP1R1-204ENST00000562576 WWC3Q9ULE0 1092 aa10.31□□□□□ -0.76
CNEP1R1-204ENST00000562576 TULP4Q9NRJ4 1543 aa10.31□□□□□ -0.76
CNEP1R1-204ENST00000562576 CRB1P82279 1406 aa10.31□□□□□ -0.76
CNEP1R1-204ENST00000562576 ACEP12821 1306 aa10.31□□□□□ -0.76
CNEP1R1-204ENST00000562576 CPDO75976 1380 aa10.3□□□□□ -0.76
CNEP1R1-204ENST00000562576 KIF3CO14782 793 aa10.29□□□□□ -0.76
CNEP1R1-204ENST00000562576 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
CNEP1R1-204ENST00000562576 TOM1L2Q6ZVM7 507 aa10.29□□□□□ -0.76
CNEP1R1-204ENST00000562576 USP19O94966 1318 aa10.29□□□□□ -0.76
CNEP1R1-204ENST00000562576 PAPPAQ13219 1627 aa10.29□□□□□ -0.76
CNEP1R1-204ENST00000562576 PNPLA7Q6ZV29 1317 aa10.28□□□□□ -0.76
CNEP1R1-204ENST00000562576 CDK19Q9BWU1 502 aa10.27□□□□□ -0.77
CNEP1R1-204ENST00000562576 ADCY9O60503 1353 aa10.26□□□□□ -0.77
CNEP1R1-204ENST00000562576 ADGRB1O14514 1584 aa10.26□□□□□ -0.77
CNEP1R1-204ENST00000562576 C11orf95C9JLR9 678 aaPredicted RBP10.26□□□□□ -0.77
CNEP1R1-204ENST00000562576 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
CNEP1R1-204ENST00000562576 EFCAB3Q8N7B9 438 aa10.26□□□□□ -0.77
CNEP1R1-204ENST00000562576 FAM205CA6NFA0 338 aa10.25□□□□□ -0.77
CNEP1R1-204ENST00000562576 GRIN3BO60391 1043 aa10.25□□□□□ -0.77
CNEP1R1-204ENST00000562576 PRELPP51888 382 aa10.25□□□□□ -0.77
CNEP1R1-204ENST00000562576 MSL1Q68DK7 614 aa10.25□□□□□ -0.77
CNEP1R1-204ENST00000562576 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
CNEP1R1-204ENST00000562576 AATKQ6ZMQ8 1374 aa10.25□□□□□ -0.77
CNEP1R1-204ENST00000562576 BCL9O00512 1426 aa10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 EXOC5O00471 708 aa10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 SOX12O15370 315 aa10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 POLD1P28340 1107 aa10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 TNS4Q8IZW8 715 aa10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 ZNF710Q8N1W2 664 aa10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 MPHOSPH9Q99550 1183 aa10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 POLR3AO14802 1390 aaPredicted RBP10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 COL18A1P39060 1754 aa10.24□□□□□ -0.77
CNEP1R1-204ENST00000562576 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
CNEP1R1-204ENST00000562576 COL24A1Q17RW2 1714 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 AKAP12Q02952 1782 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 PLEKHG3A1L390 1219 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 RIOK3O14730 519 aaKnown RBP10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 HOXB3P14651 431 aaPredicted RBP10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 APLP1P51693 650 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 WDR17Q8IZU2 1322 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 PCNTO95613 3336 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 TOPAZ1Q8N9V7 1692 aa10.22□□□□□ -0.77
CNEP1R1-204ENST00000562576 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.77
CNEP1R1-204ENST00000562576 SLC34A2O95436 690 aa10.21□□□□□ -0.77
CNEP1R1-204ENST00000562576 HOXB1P14653 301 aaPredicted RBP10.21□□□□□ -0.77
CNEP1R1-204ENST00000562576 NLRP6P59044 892 aa10.21□□□□□ -0.77
CNEP1R1-204ENST00000562576 SMIM5Q71RC9 77 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms