RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 USP54Q70EL1 1684 aa26.28■■□□□ 1.8
KATNB1-202ENST00000562542 HDGFL2Q7Z4V5 671 aaPredicted RBP26.27■■□□□ 1.8
KATNB1-202ENST00000562542 ZNF526Q8TF50 670 aaPredicted RBP26.26■■□□□ 1.79
KATNB1-202ENST00000562542 COL23A1Q86Y22 540 aaPredicted RBP26.25■■□□□ 1.79
KATNB1-202ENST00000562542 DOT1LQ8TEK3 1739 aa26.25■■□□□ 1.79
KATNB1-202ENST00000562542 IP6K1Q92551 441 aa26.24■■□□□ 1.79
KATNB1-202ENST00000562542 CD163L1Q9NR16 1453 aa26.23■■□□□ 1.79
KATNB1-202ENST00000562542 LY75O60449 1722 aa26.22■■□□□ 1.79
KATNB1-202ENST00000562542 NSD2O96028 1365 aa26.22■■□□□ 1.79
KATNB1-202ENST00000562542 HSPA6P17066 643 aa26.22■■□□□ 1.79
KATNB1-202ENST00000562542 EDC4Q6P2E9 1401 aaKnown RBP26.22■■□□□ 1.79
KATNB1-202ENST00000562542 USP47Q96K76 1375 aa26.21■■□□□ 1.79
KATNB1-202ENST00000562542 FAM208AQ9UK61 1670 aaKnown RBP26.21■■□□□ 1.79
KATNB1-202ENST00000562542 ZCRB1Q8TBF4 217 aaKnown RBP26.2■■□□□ 1.78
KATNB1-202ENST00000562542 CD2APQ9Y5K6 639 aa26.2■■□□□ 1.78
KATNB1-202ENST00000562542 SLC12A5Q9H2X9 1139 aa26.19■■□□□ 1.78
KATNB1-202ENST00000562542 TERF2IPQ9NYB0 399 aa26.19■■□□□ 1.78
KATNB1-202ENST00000562542 AMPHP49418 695 aa26.15■■□□□ 1.78
KATNB1-202ENST00000562542 NEUROD1Q13562 356 aa26.14■■□□□ 1.78
KATNB1-202ENST00000562542 A0A1W2PP64 1363 aa26.14■■□□□ 1.78
KATNB1-202ENST00000562542 ADCY9O60503 1353 aa26.14■■□□□ 1.78
KATNB1-202ENST00000562542 FLAD1Q8NFF5 587 aa26.13■■□□□ 1.77
KATNB1-202ENST00000562542 SIN3AQ96ST3 1273 aa26.13■■□□□ 1.77
KATNB1-202ENST00000562542 WWC3Q9ULE0 1092 aa26.13■■□□□ 1.77
KATNB1-202ENST00000562542 MEGF6O75095 1541 aa26.13■■□□□ 1.77
KATNB1-202ENST00000562542 HOXC9P31274 260 aa26.12■■□□□ 1.77
KATNB1-202ENST00000562542 MAP3K19Q56UN5 1328 aa26.12■■□□□ 1.77
KATNB1-202ENST00000562542 HMGB2P26583 209 aaKnown RBP26.1■■□□□ 1.77
KATNB1-202ENST00000562542 COG3Q96JB2 828 aa26.1■■□□□ 1.77
KATNB1-202ENST00000562542 C5P01031 1676 aa26.09■■□□□ 1.77
KATNB1-202ENST00000562542 CARD11Q9BXL7 1154 aa26.08■■□□□ 1.77
KATNB1-202ENST00000562542 IGSF1Q8N6C5 1336 aa26.08■■□□□ 1.77
KATNB1-202ENST00000562542 RAPGEF4Q8WZA2 1011 aa26.07■■□□□ 1.76
KATNB1-202ENST00000562542 RGPD2P0DJD1 1756 aa26.06■■□□□ 1.76
KATNB1-202ENST00000562542 FBLN1P23142 703 aa26.06■■□□□ 1.76
KATNB1-202ENST00000562542 AK7Q96M32 723 aa26.06■■□□□ 1.76
KATNB1-202ENST00000562542 PALLDQ8WX93 1383 aa26.06■■□□□ 1.76
KATNB1-202ENST00000562542 USHBP1Q8N6Y0 703 aa26.05■■□□□ 1.76
KATNB1-202ENST00000562542 PHF14O94880 888 aa26.04■■□□□ 1.76
KATNB1-202ENST00000562542 CGNL1Q0VF96 1302 aa26.04■■□□□ 1.76
KATNB1-202ENST00000562542 NBPF6Q5VWK0 638 aa26.03■■□□□ 1.76
KATNB1-202ENST00000562542 MPRIPQ6WCQ1 1025 aa26.03■■□□□ 1.76
KATNB1-202ENST00000562542 NBPF4Q96M43 638 aa26.03■■□□□ 1.76
KATNB1-202ENST00000562542 TATP17735 454 aaPredicted RBP26.02■■□□□ 1.76
KATNB1-202ENST00000562542 KIF3CO14782 793 aa26.01■■□□□ 1.75
KATNB1-202ENST00000562542 SMG6Q86US8 1419 aaKnown RBP26.01■■□□□ 1.75
KATNB1-202ENST00000562542 PCDH11XQ9BZA7 1347 aa26■■□□□ 1.75
KATNB1-202ENST00000562542 PCDH11YQ9BZA8 1340 aa26■■□□□ 1.75
KATNB1-202ENST00000562542 APLP1P51693 650 aa26■■□□□ 1.75
KATNB1-202ENST00000562542 RTL1A6NKG5 1358 aa25.99■■□□□ 1.75
KATNB1-202ENST00000562542 RRS1Q15050 365 aaKnown RBP25.99■■□□□ 1.75
KATNB1-202ENST00000562542 C4BP0C0L5 1744 aa25.98■■□□□ 1.75
KATNB1-202ENST00000562542 TAF1LQ8IZX4 1826 aa25.98■■□□□ 1.75
KATNB1-202ENST00000562542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.97■■□□□ 1.75
KATNB1-202ENST00000562542 SMIM5Q71RC9 77 aa25.97■■□□□ 1.75
KATNB1-202ENST00000562542 SMARCC1Q92922 1105 aaPredicted RBP25.97■■□□□ 1.75
KATNB1-202ENST00000562542 PUS7Q96PZ0 661 aaKnown RBP25.97■■□□□ 1.75
KATNB1-202ENST00000562542 NSD3Q9BZ95 1437 aa25.97■■□□□ 1.75
KATNB1-202ENST00000562542 AMIGO3Q86WK7 504 aa25.96■■□□□ 1.75
KATNB1-202ENST00000562542 TOGARAM1Q9Y4F4 1720 aa25.91■■□□□ 1.74
KATNB1-202ENST00000562542 TOMM70O94826 608 aa25.91■■□□□ 1.74
KATNB1-202ENST00000562542 SSFA2P28290 1259 aa25.91■■□□□ 1.74
KATNB1-202ENST00000562542 CYP27B1O15528 508 aa25.89■■□□□ 1.74
KATNB1-202ENST00000562542 GGNBP2Q9H3C7 697 aa25.89■■□□□ 1.74
KATNB1-202ENST00000562542 UBR3Q6ZT12 1888 aa25.89■■□□□ 1.73
KATNB1-202ENST00000562542 HSP90AB2PQ58FF8 381 aa25.87■■□□□ 1.73
KATNB1-202ENST00000562542 LINC00116Q8NCU8 138 aa25.87■■□□□ 1.73
KATNB1-202ENST00000562542 PIGBQ92521 554 aa25.87■■□□□ 1.73
KATNB1-202ENST00000562542 CICQ96RK0 1608 aaPredicted RBP25.87■■□□□ 1.73
KATNB1-202ENST00000562542 LOC102724428A0A0B4J2F2 783 aa25.86■■□□□ 1.73
KATNB1-202ENST00000562542 GNPATO15228 680 aa25.86■■□□□ 1.73
KATNB1-202ENST00000562542 SIK1P57059 783 aa25.86■■□□□ 1.73
KATNB1-202ENST00000562542 DNAJC5GQ8N7S2 189 aa25.86■■□□□ 1.73
KATNB1-202ENST00000562542 BCS1LQ9Y276 419 aa25.86■■□□□ 1.73
KATNB1-202ENST00000562542 INSRP06213 1382 aa25.85■■□□□ 1.73
KATNB1-202ENST00000562542 MMP10P09238 476 aa25.85■■□□□ 1.73
KATNB1-202ENST00000562542 ITGB4P16144 1822 aa25.84■■□□□ 1.73
KATNB1-202ENST00000562542 FYB1O15117 783 aa25.83■■□□□ 1.73
KATNB1-202ENST00000562542 ARHGAP27Q6ZUM4 889 aa25.83■■□□□ 1.73
KATNB1-202ENST00000562542 NMRK2Q9NPI5 230 aa25.83■■□□□ 1.73
KATNB1-202ENST00000562542 PXDNLA1KZ92 1463 aa25.83■■□□□ 1.73
KATNB1-202ENST00000562542 FLT4P35916 1363 aa25.82■■□□□ 1.72
KATNB1-202ENST00000562542 ST20-MTHFSA0A0A6YYL1 179 aa25.81■■□□□ 1.72
KATNB1-202ENST00000562542 C16orf71Q8IYS4 520 aaPredicted RBP25.81■■□□□ 1.72
KATNB1-202ENST00000562542 TESK2Q96S53 571 aa25.81■■□□□ 1.72
KATNB1-202ENST00000562542 TMOD3Q9NYL9 352 aa25.81■■□□□ 1.72
KATNB1-202ENST00000562542 A0A0G2JLW4 131 aa25.8■■□□□ 1.72
KATNB1-202ENST00000562542 ATP6V1AP38606 617 aa25.8■■□□□ 1.72
KATNB1-202ENST00000562542 TGFB2P61812 414 aa25.8■■□□□ 1.72
KATNB1-202ENST00000562542 SPG7Q9UQ90 795 aa25.8■■□□□ 1.72
KATNB1-202ENST00000562542 SLC24A1O60721 1099 aa25.78■■□□□ 1.72
KATNB1-202ENST00000562542 ITPK1Q13572 414 aa25.78■■□□□ 1.72
KATNB1-202ENST00000562542 CAPN15O75808 1086 aa25.77■■□□□ 1.72
KATNB1-202ENST00000562542 NKX1-1Q15270 411 aaPredicted RBP25.77■■□□□ 1.72
KATNB1-202ENST00000562542 ASAP1Q9ULH1 1129 aa25.77■■□□□ 1.72
KATNB1-202ENST00000562542 N4BP2Q86UW6 1770 aaPredicted RBP25.77■■□□□ 1.72
KATNB1-202ENST00000562542 FCHSD2O94868 740 aa25.76■■□□□ 1.71
KATNB1-202ENST00000562542 RBM46Q8TBY0 533 aaKnown RBP25.76■■□□□ 1.71
KATNB1-202ENST00000562542 KIF24Q5T7B8 1368 aa25.76■■□□□ 1.71
KATNB1-202ENST00000562542 TONSLQ96HA7 1378 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms