RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 CHD4Q14839 1912 aa27.24■■□□□ 1.95
CDH11-203ENST00000562325 PRIM1P49642 420 aaKnown RBP27.23■■□□□ 1.95
CDH11-203ENST00000562325 PNPLA7Q6ZV29 1317 aa27.22■■□□□ 1.95
CDH11-203ENST00000562325 NSD2O96028 1365 aa27.22■■□□□ 1.95
CDH11-203ENST00000562325 TFCP2L1Q9NZI6 479 aa27.21■■□□□ 1.95
CDH11-203ENST00000562325 LY75O60449 1722 aa27.2■■□□□ 1.94
CDH11-203ENST00000562325 SMG6Q86US8 1419 aaKnown RBP27.19■■□□□ 1.94
CDH11-203ENST00000562325 SYTL4Q96C24 671 aaPredicted RBP27.19■■□□□ 1.94
CDH11-203ENST00000562325 MEGF6O75095 1541 aa27.19■■□□□ 1.94
CDH11-203ENST00000562325 KIF24Q5T7B8 1368 aa27.19■■□□□ 1.94
CDH11-203ENST00000562325 DOT1LQ8TEK3 1739 aa27.18■■□□□ 1.94
CDH11-203ENST00000562325 SHANK3Q9BYB0 1731 aa27.16■■□□□ 1.94
CDH11-203ENST00000562325 USP47Q96K76 1375 aa27.15■■□□□ 1.94
CDH11-203ENST00000562325 FYB1O15117 783 aa27.15■■□□□ 1.94
CDH11-203ENST00000562325 TMF1P82094 1093 aa27.15■■□□□ 1.94
CDH11-203ENST00000562325 GPR162Q16538 588 aa27.15■■□□□ 1.94
CDH11-203ENST00000562325 RAPGEF4Q8WZA2 1011 aa27.14■■□□□ 1.94
CDH11-203ENST00000562325 CCNL1Q9UK58 526 aaPredicted RBP27.14■■□□□ 1.94
CDH11-203ENST00000562325 INSRP06213 1382 aa27.13■■□□□ 1.93
CDH11-203ENST00000562325 CDCA8Q53HL2 280 aa27.13■■□□□ 1.93
CDH11-203ENST00000562325 NBPF6Q5VWK0 638 aa27.13■■□□□ 1.93
CDH11-203ENST00000562325 NBPF4Q96M43 638 aa27.13■■□□□ 1.93
CDH11-203ENST00000562325 FBLN1P23142 703 aa27.11■■□□□ 1.93
CDH11-203ENST00000562325 RRS1Q15050 365 aaKnown RBP27.1■■□□□ 1.93
CDH11-203ENST00000562325 TUBGCP6Q96RT7 1819 aa27.1■■□□□ 1.93
CDH11-203ENST00000562325 PCDH11XQ9BZA7 1347 aa27.1■■□□□ 1.93
CDH11-203ENST00000562325 PCDH11YQ9BZA8 1340 aa27.1■■□□□ 1.93
CDH11-203ENST00000562325 FLT4P35916 1363 aa27.09■■□□□ 1.93
CDH11-203ENST00000562325 TATP17735 454 aaPredicted RBP27.09■■□□□ 1.93
CDH11-203ENST00000562325 GOLGB1Q14789 3259 aaKnown RBP27.09■■□□□ 1.93
CDH11-203ENST00000562325 RGPD2P0DJD1 1756 aa27.09■■□□□ 1.93
CDH11-203ENST00000562325 KCNQ4P56696 695 aa27.08■■□□□ 1.93
CDH11-203ENST00000562325 FLAD1Q8NFF5 587 aa27.08■■□□□ 1.93
CDH11-203ENST00000562325 GGNBP2Q9H3C7 697 aa27.08■■□□□ 1.93
CDH11-203ENST00000562325 C1QTNF8P60827 252 aa27.07■■□□□ 1.92
CDH11-203ENST00000562325 GRIN3BO60391 1043 aa27.06■■□□□ 1.92
CDH11-203ENST00000562325 COL23A1Q86Y22 540 aaPredicted RBP27.04■■□□□ 1.92
CDH11-203ENST00000562325 KLHL34Q8N239 644 aa27.04■■□□□ 1.92
CDH11-203ENST00000562325 HSP90AB2PQ58FF8 381 aa27.02■■□□□ 1.92
CDH11-203ENST00000562325 USHBP1Q8N6Y0 703 aa27.02■■□□□ 1.92
CDH11-203ENST00000562325 NCAPD2Q15021 1401 aa27.01■■□□□ 1.91
CDH11-203ENST00000562325 PALLDQ8WX93 1383 aa27.01■■□□□ 1.91
CDH11-203ENST00000562325 NLGN2Q8NFZ4 835 aa27.01■■□□□ 1.91
CDH11-203ENST00000562325 SMARCC1Q92922 1105 aaPredicted RBP27.01■■□□□ 1.91
CDH11-203ENST00000562325 CD2APQ9Y5K6 639 aa27■■□□□ 1.91
CDH11-203ENST00000562325 C5P01031 1676 aa27■■□□□ 1.91
CDH11-203ENST00000562325 KIF20BQ96Q89 1820 aa27■■□□□ 1.91
CDH11-203ENST00000562325 MSH5O43196 834 aa26.99■■□□□ 1.91
CDH11-203ENST00000562325 NSD3Q9BZ95 1437 aa26.99■■□□□ 1.91
CDH11-203ENST00000562325 CYP27B1O15528 508 aa26.97■■□□□ 1.91
CDH11-203ENST00000562325 GIGYF1O75420 1035 aaPredicted RBP26.97■■□□□ 1.91
CDH11-203ENST00000562325 PELP1Q8IZL8 1130 aaKnown RBP26.97■■□□□ 1.91
CDH11-203ENST00000562325 SENP3-EIF4A1A0A087X0R7 540 aa26.96■■□□□ 1.91
CDH11-203ENST00000562325 NKX1-1Q15270 411 aaPredicted RBP26.96■■□□□ 1.91
CDH11-203ENST00000562325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.95■■□□□ 1.9
CDH11-203ENST00000562325 PKD1L3Q7Z443 1732 aa26.95■■□□□ 1.9
CDH11-203ENST00000562325 PLEKHG2Q9H7P9 1386 aa26.95■■□□□ 1.9
CDH11-203ENST00000562325 MPRIPQ6WCQ1 1025 aa26.94■■□□□ 1.9
CDH11-203ENST00000562325 YBX3P16989 372 aaKnown RBP eCLIP26.93■■□□□ 1.9
CDH11-203ENST00000562325 CARD14Q9BXL6 1004 aa26.93■■□□□ 1.9
CDH11-203ENST00000562325 TAF1LQ8IZX4 1826 aa26.93■■□□□ 1.9
CDH11-203ENST00000562325 TIMELESSQ9UNS1 1208 aa26.92■■□□□ 1.9
CDH11-203ENST00000562325 SPG7Q9UQ90 795 aa26.92■■□□□ 1.9
CDH11-203ENST00000562325 WASHC2AQ641Q2 1341 aa26.91■■□□□ 1.9
CDH11-203ENST00000562325 ANKRD26Q9UPS8 1709 aa26.91■■□□□ 1.9
CDH11-203ENST00000562325 MSL1Q68DK7 614 aa26.9■■□□□ 1.9
CDH11-203ENST00000562325 AK7Q96M32 723 aa26.9■■□□□ 1.9
CDH11-203ENST00000562325 EMILIN1Q9Y6C2 1016 aa26.9■■□□□ 1.9
CDH11-203ENST00000562325 C4BP0C0L5 1744 aa26.9■■□□□ 1.9
CDH11-203ENST00000562325 TOGARAM1Q9Y4F4 1720 aa26.88■■□□□ 1.89
CDH11-203ENST00000562325 SSFA2P28290 1259 aa26.88■■□□□ 1.89
CDH11-203ENST00000562325 PIGBQ92521 554 aa26.88■■□□□ 1.89
CDH11-203ENST00000562325 ITGB4P16144 1822 aa26.86■■□□□ 1.89
CDH11-203ENST00000562325 LOC102724428A0A0B4J2F2 783 aa26.84■■□□□ 1.89
CDH11-203ENST00000562325 SIK1P57059 783 aa26.84■■□□□ 1.89
CDH11-203ENST00000562325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.83■■□□□ 1.89
CDH11-203ENST00000562325 MAP2P11137 1827 aaKnown RBP26.82■■□□□ 1.88
CDH11-203ENST00000562325 IFNL2Q8IZJ0 200 aa26.82■■□□□ 1.88
CDH11-203ENST00000562325 EYA1Q99502 592 aa26.82■■□□□ 1.88
CDH11-203ENST00000562325 TMOD3Q9NYL9 352 aa26.82■■□□□ 1.88
CDH11-203ENST00000562325 UBR3Q6ZT12 1888 aa26.82■■□□□ 1.88
CDH11-203ENST00000562325 PPM1GO15355 546 aaPredicted RBP26.81■■□□□ 1.88
CDH11-203ENST00000562325 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
CDH11-203ENST00000562325 POLKQ9UBT6 870 aa26.8■■□□□ 1.88
CDH11-203ENST00000562325 ADCY9O60503 1353 aa26.8■■□□□ 1.88
CDH11-203ENST00000562325 ATP10DQ9P241 1426 aa26.8■■□□□ 1.88
CDH11-203ENST00000562325 PHKG2P15735 406 aa26.79■■□□□ 1.88
CDH11-203ENST00000562325 AMIGO3Q86WK7 504 aa26.78■■□□□ 1.88
CDH11-203ENST00000562325 CLSPNQ9HAW4 1339 aa26.78■■□□□ 1.88
CDH11-203ENST00000562325 LINC00116Q8NCU8 138 aa26.77■■□□□ 1.88
CDH11-203ENST00000562325 PHF14O94880 888 aa26.76■■□□□ 1.87
CDH11-203ENST00000562325 IGSF1Q8N6C5 1336 aa26.75■■□□□ 1.87
CDH11-203ENST00000562325 GPBP1L1Q9HC44 474 aaPredicted RBP26.75■■□□□ 1.87
CDH11-203ENST00000562325 ASAP1Q9ULH1 1129 aa26.74■■□□□ 1.87
CDH11-203ENST00000562325 HSP90AB1P08238 724 aaKnown RBP26.73■■□□□ 1.87
CDH11-203ENST00000562325 ATP6V1AP38606 617 aa26.73■■□□□ 1.87
CDH11-203ENST00000562325 ZNF831Q5JPB2 1677 aa26.73■■□□□ 1.87
CDH11-203ENST00000562325 CEP350Q5VT06 3117 aa26.72■■□□□ 1.87
CDH11-203ENST00000562325 ERVV-2B6SEH9 535 aa26.72■■□□□ 1.87
CDH11-203ENST00000562325 GNPATO15228 680 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms