RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 HOXD11P31277 338 aaPredicted RBP9.67□□□□□ -0.86
TUBGCP4-203ENST00000562053 EIF4A2Q14240 407 aaKnown RBP9.67□□□□□ -0.86
TUBGCP4-203ENST00000562053 DDB1Q16531 1140 aa9.67□□□□□ -0.86
TUBGCP4-203ENST00000562053 USHBP1Q8N6Y0 703 aa9.66□□□□□ -0.86
TUBGCP4-203ENST00000562053 UPF1Q92900 1129 aaKnown RBP eCLIP9.66□□□□□ -0.86
TUBGCP4-203ENST00000562053 BTAF1O14981 1849 aa9.66□□□□□ -0.86
TUBGCP4-203ENST00000562053 NUP188Q5SRE5 1749 aa9.65□□□□□ -0.86
TUBGCP4-203ENST00000562053 VIRMAQ69YN4 1812 aaKnown RBP9.64□□□□□ -0.87
TUBGCP4-203ENST00000562053 MTHFSP49914 203 aa9.64□□□□□ -0.87
TUBGCP4-203ENST00000562053 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
TUBGCP4-203ENST00000562053 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
TUBGCP4-203ENST00000562053 FAM182BQ5T319 152 aa9.64□□□□□ -0.87
TUBGCP4-203ENST00000562053 POTEDQ86YR6 584 aa9.64□□□□□ -0.87
TUBGCP4-203ENST00000562053 EYA1Q99502 592 aa9.64□□□□□ -0.87
TUBGCP4-203ENST00000562053 ADAMTS7Q9UKP4 1686 aa9.64□□□□□ -0.87
TUBGCP4-203ENST00000562053 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
TUBGCP4-203ENST00000562053 PPP2R1AP30153 589 aa9.63□□□□□ -0.87
TUBGCP4-203ENST00000562053 IL13P35225 146 aa9.63□□□□□ -0.87
TUBGCP4-203ENST00000562053 CNGB1Q14028 1251 aaPredicted RBP9.63□□□□□ -0.87
TUBGCP4-203ENST00000562053 FAM196AQ6ZSG2 479 aa9.63□□□□□ -0.87
TUBGCP4-203ENST00000562053 MARCH10Q8NA82 808 aaPredicted RBP9.63□□□□□ -0.87
TUBGCP4-203ENST00000562053 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
TUBGCP4-203ENST00000562053 ITGB4P16144 1822 aa9.63□□□□□ -0.87
TUBGCP4-203ENST00000562053 PCDH11XQ9BZA7 1347 aa9.62□□□□□ -0.87
TUBGCP4-203ENST00000562053 PCDH11YQ9BZA8 1340 aa9.62□□□□□ -0.87
TUBGCP4-203ENST00000562053 CCDC125Q86Z20 511 aa9.62□□□□□ -0.87
TUBGCP4-203ENST00000562053 LY75O60449 1722 aa9.62□□□□□ -0.87
TUBGCP4-203ENST00000562053 PAPPAQ13219 1627 aa9.61□□□□□ -0.87
TUBGCP4-203ENST00000562053 SCN11AQ9UI33 1791 aa9.61□□□□□ -0.87
TUBGCP4-203ENST00000562053 EXOC5O00471 708 aa9.61□□□□□ -0.87
TUBGCP4-203ENST00000562053 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
TUBGCP4-203ENST00000562053 AEBP1Q8IUX7 1158 aa9.61□□□□□ -0.87
TUBGCP4-203ENST00000562053 MRC1P22897 1456 aa9.6□□□□□ -0.87
TUBGCP4-203ENST00000562053 DIAPH1O60610 1272 aaKnown RBP9.6□□□□□ -0.87
TUBGCP4-203ENST00000562053 RALBP1Q15311 655 aa9.6□□□□□ -0.87
TUBGCP4-203ENST00000562053 MYBBP1AQ9BQG0 1328 aaKnown RBP9.59□□□□□ -0.87
TUBGCP4-203ENST00000562053 ZCRB1Q8TBF4 217 aaKnown RBP9.59□□□□□ -0.87
TUBGCP4-203ENST00000562053 CFAP53Q96M91 514 aa9.59□□□□□ -0.87
TUBGCP4-203ENST00000562053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.87
TUBGCP4-203ENST00000562053 KDM6AO15550 1401 aaPredicted RBP9.58□□□□□ -0.88
TUBGCP4-203ENST00000562053 CICQ96RK0 1608 aaPredicted RBP9.58□□□□□ -0.88
TUBGCP4-203ENST00000562053 CYP27B1O15528 508 aa9.58□□□□□ -0.88
TUBGCP4-203ENST00000562053 TRIM37O94972 964 aa9.58□□□□□ -0.88
TUBGCP4-203ENST00000562053 SULT6B1Q6IMI4 303 aa9.58□□□□□ -0.88
TUBGCP4-203ENST00000562053 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
TUBGCP4-203ENST00000562053 BAG6P46379 1132 aa9.57□□□□□ -0.88
TUBGCP4-203ENST00000562053 SF3B2Q13435 895 aaKnown RBP9.57□□□□□ -0.88
TUBGCP4-203ENST00000562053 BCL11BQ9C0K0 894 aaPredicted RBP9.57□□□□□ -0.88
TUBGCP4-203ENST00000562053 PRKRIP1Q9H875 184 aaPredicted RBP9.57□□□□□ -0.88
TUBGCP4-203ENST00000562053 SPG7Q9UQ90 795 aa9.57□□□□□ -0.88
TUBGCP4-203ENST00000562053 KAT6BQ8WYB5 2073 aa9.57□□□□□ -0.88
TUBGCP4-203ENST00000562053 DLG5Q8TDM6 1919 aa9.56□□□□□ -0.88
TUBGCP4-203ENST00000562053 C5P01031 1676 aa9.56□□□□□ -0.88
TUBGCP4-203ENST00000562053 ZNF831Q5JPB2 1677 aa9.56□□□□□ -0.88
TUBGCP4-203ENST00000562053 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
TUBGCP4-203ENST00000562053 DEFB132Q7Z7B7 95 aa9.56□□□□□ -0.88
TUBGCP4-203ENST00000562053 DDX54Q8TDD1 881 aaKnown RBP9.56□□□□□ -0.88
TUBGCP4-203ENST00000562053 TAF1LQ8IZX4 1826 aa9.56□□□□□ -0.88
TUBGCP4-203ENST00000562053 UBR2Q8IWV8 1755 aa9.55□□□□□ -0.88
TUBGCP4-203ENST00000562053 TUBGCP6Q96RT7 1819 aa9.55□□□□□ -0.88
TUBGCP4-203ENST00000562053 DCAF8L1A6NGE4 600 aa9.55□□□□□ -0.88
TUBGCP4-203ENST00000562053 HMOX1P09601 288 aa9.55□□□□□ -0.88
TUBGCP4-203ENST00000562053 PHKG2P15735 406 aa9.55□□□□□ -0.88
TUBGCP4-203ENST00000562053 NKX1-1Q15270 411 aaPredicted RBP9.55□□□□□ -0.88
TUBGCP4-203ENST00000562053 AMOTQ4VCS5 1084 aa9.55□□□□□ -0.88
TUBGCP4-203ENST00000562053 QSER1Q2KHR3 1735 aa9.55□□□□□ -0.88
TUBGCP4-203ENST00000562053 COL5A3P25940 1745 aaPredicted RBP9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 U2SURPO15042 1029 aaKnown RBP9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 KCNQ2O43526 872 aa9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 PLEKHO1Q53GL0 409 aaPredicted RBP9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 ZNF530Q6P9A1 599 aaPredicted RBP9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 IFNL2Q8IZJ0 200 aa9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 ACSBG1Q96GR2 724 aa9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 NUDCQ9Y266 331 aa9.54□□□□□ -0.88
TUBGCP4-203ENST00000562053 MAP3K5Q99683 1374 aa9.53□□□□□ -0.88
TUBGCP4-203ENST00000562053 CASZ1Q86V15 1759 aa9.53□□□□□ -0.88
TUBGCP4-203ENST00000562053 APBA3O96018 575 aa9.53□□□□□ -0.88
TUBGCP4-203ENST00000562053 EN1Q05925 392 aaPredicted RBP9.53□□□□□ -0.88
TUBGCP4-203ENST00000562053 CAMKK2Q96RR4 588 aa9.53□□□□□ -0.88
TUBGCP4-203ENST00000562053 TJP1Q07157 1748 aa9.53□□□□□ -0.88
TUBGCP4-203ENST00000562053 PLSCR1O15162 318 aa9.52□□□□□ -0.89
TUBGCP4-203ENST00000562053 U2AF1L5P0DN76 240 aaPredicted RBP9.52□□□□□ -0.89
TUBGCP4-203ENST00000562053 PRKAR2BP31323 418 aa9.52□□□□□ -0.89
TUBGCP4-203ENST00000562053 U2AF1Q01081 240 aaKnown RBP eCLIP9.52□□□□□ -0.89
TUBGCP4-203ENST00000562053 HSP90AB1P08238 724 aaKnown RBP9.51□□□□□ -0.89
TUBGCP4-203ENST00000562053 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
TUBGCP4-203ENST00000562053 EZH2Q15910 746 aaKnown RBP9.51□□□□□ -0.89
TUBGCP4-203ENST00000562053 AKAP4Q5JQC9 854 aa9.51□□□□□ -0.89
TUBGCP4-203ENST00000562053 C1orf141Q5JVX7 400 aa9.51□□□□□ -0.89
TUBGCP4-203ENST00000562053 DCAF5Q96JK2 942 aa9.51□□□□□ -0.89
TUBGCP4-203ENST00000562053 LRP5O75197 1615 aa9.51□□□□□ -0.89
TUBGCP4-203ENST00000562053 C4BP0C0L5 1744 aa9.51□□□□□ -0.89
TUBGCP4-203ENST00000562053 PALLDQ8WX93 1383 aa9.5□□□□□ -0.89
TUBGCP4-203ENST00000562053 KDM3BQ7LBC6 1761 aa9.5□□□□□ -0.89
TUBGCP4-203ENST00000562053 FCHSD2O94868 740 aa9.5□□□□□ -0.89
TUBGCP4-203ENST00000562053 MTHFSDQ2M296 383 aaKnown RBP9.5□□□□□ -0.89
TUBGCP4-203ENST00000562053 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
TUBGCP4-203ENST00000562053 SYTL4Q96C24 671 aaPredicted RBP9.5□□□□□ -0.89
TUBGCP4-203ENST00000562053 KCPQ6ZWJ8 1503 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms