RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 UNC5CLQ8IV45 518 aa15.05■□□□□ 0
PCAT1-202ENST00000561978 PNNQ9H307 717 aaKnown RBP15.05■□□□□ 0
PCAT1-202ENST00000561978 QTRT2Q9H974 415 aaKnown RBP15.05■□□□□ 0
PCAT1-202ENST00000561978 STRN4Q9NRL3 753 aa15.05■□□□□ 0
PCAT1-202ENST00000561978 PODXL2Q9NZ53 605 aa15.05■□□□□ 0
PCAT1-202ENST00000561978 AXIN2Q9Y2T1 843 aa15.05■□□□□ 0
PCAT1-202ENST00000561978 CRBNQ96SW2 442 aa15.05■□□□□ -0
PCAT1-202ENST00000561978 CAMTA1Q9Y6Y1 1673 aa15.05■□□□□ -0
PCAT1-202ENST00000561978 RGPD5Q99666 1765 aa15.04■□□□□ -0
PCAT1-202ENST00000561978 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
PCAT1-202ENST00000561978 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
PCAT1-202ENST00000561978 NWD2Q9ULI1 1742 aa15.04■□□□□ -0
PCAT1-202ENST00000561978 CCDC9Q9Y3X0 531 aaKnown RBP15.03■□□□□ -0
PCAT1-202ENST00000561978 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
PCAT1-202ENST00000561978 AATKQ6ZMQ8 1374 aa15.03■□□□□ -0
PCAT1-202ENST00000561978 TCERG1O14776 1098 aaKnown RBP15.02■□□□□ -0
PCAT1-202ENST00000561978 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
PCAT1-202ENST00000561978 TRPC5Q9UL62 973 aaPredicted RBP15.02■□□□□ -0
PCAT1-202ENST00000561978 LMO7Q8WWI1 1683 aa15.02■□□□□ -0
PCAT1-202ENST00000561978 COL18A1P39060 1754 aa15.02□□□□□ -0.01
PCAT1-202ENST00000561978 MAP2P11137 1827 aaKnown RBP15.02□□□□□ -0.01
PCAT1-202ENST00000561978 NRAPQ86VF7 1730 aa15.02□□□□□ -0.01
PCAT1-202ENST00000561978 EVA1CP58658 441 aa15.02□□□□□ -0.01
PCAT1-202ENST00000561978 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
PCAT1-202ENST00000561978 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
PCAT1-202ENST00000561978 USP35Q9P2H5 1018 aa15.01□□□□□ -0.01
PCAT1-202ENST00000561978 EMILIN1Q9Y6C2 1016 aa15.01□□□□□ -0.01
PCAT1-202ENST00000561978 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.01□□□□□ -0.01
PCAT1-202ENST00000561978 AMPHP49418 695 aa15□□□□□ -0.01
PCAT1-202ENST00000561978 ATRNO75882 1429 aa15□□□□□ -0.01
PCAT1-202ENST00000561978 NEUROD2Q15784 382 aa15□□□□□ -0.01
PCAT1-202ENST00000561978 LARP1Q6PKG0 1096 aaKnown RBP15□□□□□ -0.01
PCAT1-202ENST00000561978 MYH16Q9H6N6 1097 aa15□□□□□ -0.01
PCAT1-202ENST00000561978 COL5A2P05997 1499 aaPredicted RBP14.99□□□□□ -0.01
PCAT1-202ENST00000561978 DIAPH1O60610 1272 aaKnown RBP14.99□□□□□ -0.01
PCAT1-202ENST00000561978 RXRBP28702 533 aa14.99□□□□□ -0.01
PCAT1-202ENST00000561978 GJD4Q96KN9 370 aaPredicted RBP14.99□□□□□ -0.01
PCAT1-202ENST00000561978 MS4A1P11836 297 aa14.98□□□□□ -0.01
PCAT1-202ENST00000561978 HOXC9P31274 260 aa14.98□□□□□ -0.01
PCAT1-202ENST00000561978 PDE3AQ14432 1141 aa14.98□□□□□ -0.01
PCAT1-202ENST00000561978 VPS72Q15906 364 aa14.98□□□□□ -0.01
PCAT1-202ENST00000561978 C20orf194Q5TEA3 1177 aa14.98□□□□□ -0.01
PCAT1-202ENST00000561978 ILDR2Q71H61 639 aa14.98□□□□□ -0.01
PCAT1-202ENST00000561978 LTV1Q96GA3 475 aaPredicted RBP14.98□□□□□ -0.01
PCAT1-202ENST00000561978 COL3A1P02461 1466 aaPredicted RBP14.98□□□□□ -0.01
PCAT1-202ENST00000561978 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
PCAT1-202ENST00000561978 RBM6P78332 1123 aaKnown RBP14.98□□□□□ -0.01
PCAT1-202ENST00000561978 KLHL34Q8N239 644 aa14.98□□□□□ -0.01
PCAT1-202ENST00000561978 RRP7AQ9Y3A4 280 aaKnown RBP14.98□□□□□ -0.01
PCAT1-202ENST00000561978 MAPK8IP3Q9UPT6 1336 aa14.97□□□□□ -0.01
PCAT1-202ENST00000561978 CSB-PGBD3P0DP91 1061 aa14.97□□□□□ -0.01
PCAT1-202ENST00000561978 HSP90AB2PQ58FF8 381 aa14.97□□□□□ -0.01
PCAT1-202ENST00000561978 IP6K1Q92551 441 aa14.97□□□□□ -0.01
PCAT1-202ENST00000561978 POLKQ9UBT6 870 aa14.97□□□□□ -0.01
PCAT1-202ENST00000561978 PEAK1Q9H792 1746 aa14.97□□□□□ -0.01
PCAT1-202ENST00000561978 CENPQQ7L2Z9 268 aaPredicted RBP14.96□□□□□ -0.01
PCAT1-202ENST00000561978 PLEKHF1Q96S99 279 aa14.96□□□□□ -0.01
PCAT1-202ENST00000561978 GLI3P10071 1580 aa14.96□□□□□ -0.01
PCAT1-202ENST00000561978 ERBB3P21860 1342 aa14.96□□□□□ -0.01
PCAT1-202ENST00000561978 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
PCAT1-202ENST00000561978 TOM1L2Q6ZVM7 507 aa14.96□□□□□ -0.01
PCAT1-202ENST00000561978 SPATA31A5Q5VU36 1347 aa14.95□□□□□ -0.02
PCAT1-202ENST00000561978 SPATA31A7Q8IWB4 1347 aa14.95□□□□□ -0.02
PCAT1-202ENST00000561978 WDR17Q8IZU2 1322 aa14.95□□□□□ -0.02
PCAT1-202ENST00000561978 BCAR3O75815 825 aa14.95□□□□□ -0.02
PCAT1-202ENST00000561978 FCHSD2O94868 740 aa14.95□□□□□ -0.02
PCAT1-202ENST00000561978 ANKRD24Q8TF21 1146 aa14.95□□□□□ -0.02
PCAT1-202ENST00000561978 SPATA31A1Q5TZJ5 1347 aa14.95□□□□□ -0.02
PCAT1-202ENST00000561978 NEFMP07197 916 aa14.94□□□□□ -0.02
PCAT1-202ENST00000561978 AAMPQ13685 434 aa14.94□□□□□ -0.02
PCAT1-202ENST00000561978 FAM98CQ17RN3 349 aaKnown RBP14.94□□□□□ -0.02
PCAT1-202ENST00000561978 FLT4P35916 1363 aa14.94□□□□□ -0.02
PCAT1-202ENST00000561978 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
PCAT1-202ENST00000561978 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
PCAT1-202ENST00000561978 TMPOP42166 694 aaKnown RBP14.94□□□□□ -0.02
PCAT1-202ENST00000561978 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
PCAT1-202ENST00000561978 ABCC6O95255 1503 aa14.93□□□□□ -0.02
PCAT1-202ENST00000561978 IL16Q14005 1332 aa14.93□□□□□ -0.02
PCAT1-202ENST00000561978 A0A0G2JS52 829 aa14.93□□□□□ -0.02
PCAT1-202ENST00000561978 CANXP27824 592 aaKnown RBP14.93□□□□□ -0.02
PCAT1-202ENST00000561978 CRB1P82279 1406 aa14.93□□□□□ -0.02
PCAT1-202ENST00000561978 RTL1A6NKG5 1358 aa14.93□□□□□ -0.02
PCAT1-202ENST00000561978 NLRP2Q9NX02 1062 aa14.93□□□□□ -0.02
PCAT1-202ENST00000561978 RGS12O14924 1447 aa14.92□□□□□ -0.02
PCAT1-202ENST00000561978 RARSP54136 660 aaKnown RBP14.92□□□□□ -0.02
PCAT1-202ENST00000561978 RGPD2P0DJD1 1756 aa14.92□□□□□ -0.02
PCAT1-202ENST00000561978 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
PCAT1-202ENST00000561978 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
PCAT1-202ENST00000561978 KIF24Q5T7B8 1368 aa14.9□□□□□ -0.02
PCAT1-202ENST00000561978 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
PCAT1-202ENST00000561978 USHBP1Q8N6Y0 703 aa14.89□□□□□ -0.03
PCAT1-202ENST00000561978 RIPK4P57078 832 aa14.89□□□□□ -0.03
PCAT1-202ENST00000561978 NBPF6Q5VWK0 638 aa14.89□□□□□ -0.03
PCAT1-202ENST00000561978 NBPF4Q96M43 638 aa14.89□□□□□ -0.03
PCAT1-202ENST00000561978 CARD10Q9BWT7 1032 aa14.89□□□□□ -0.03
PCAT1-202ENST00000561978 TRIM35Q9UPQ4 493 aa14.89□□□□□ -0.03
PCAT1-202ENST00000561978 ONECUT3O60422 494 aaPredicted RBP14.88□□□□□ -0.03
PCAT1-202ENST00000561978 ANP32AP39687 249 aaKnown RBP14.88□□□□□ -0.03
PCAT1-202ENST00000561978 BRWD3Q6RI45 1802 aa14.87□□□□□ -0.03
PCAT1-202ENST00000561978 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms