RNA–Protein interactions for RNA: ENST00000561930.1

PDXDC1-206, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-206ENST00000561930 COL25A1Q9BXS0 654 aaPredicted RBP10.16□□□□□ -0.78
PDXDC1-206ENST00000561930 PRM3Q9NNZ6 103 aa10.16□□□□□ -0.78
PDXDC1-206ENST00000561930 NANOS1Q8WY41 292 aaKnown RBP10.15□□□□□ -0.78
PDXDC1-206ENST00000561930 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
PDXDC1-206ENST00000561930 CC2D2BQ6DHV5 1058 aa10.14□□□□□ -0.79
PDXDC1-206ENST00000561930 SLC27A3Q5K4L6 730 aa10.13□□□□□ -0.79
PDXDC1-206ENST00000561930 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
PDXDC1-206ENST00000561930 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
PDXDC1-206ENST00000561930 CYP2U1Q7Z449 544 aa10.12□□□□□ -0.79
PDXDC1-206ENST00000561930 SNRKQ9NRH2 765 aa10.12□□□□□ -0.79
PDXDC1-206ENST00000561930 RHOQP17081 205 aa10.11□□□□□ -0.79
PDXDC1-206ENST00000561930 RNF144AP50876 292 aaPredicted RBP10.11□□□□□ -0.79
PDXDC1-206ENST00000561930 KDF1Q8NAX2 398 aaPredicted RBP10.11□□□□□ -0.79
PDXDC1-206ENST00000561930 MTMR14Q8NCE2 650 aa10.11□□□□□ -0.79
PDXDC1-206ENST00000561930 A0A1W2PRU2 124 aa10.1□□□□□ -0.79
PDXDC1-206ENST00000561930 SOCS7O14512 581 aa10.09□□□□□ -0.79
PDXDC1-206ENST00000561930 ERVK-9P63128 1117 aa10.09□□□□□ -0.79
PDXDC1-206ENST00000561930 FOXR1Q6PIV2 292 aa10.09□□□□□ -0.79
PDXDC1-206ENST00000561930 RIPOR1Q6ZS17 1223 aa10.09□□□□□ -0.79
PDXDC1-206ENST00000561930 SVOPQ8N4V2 548 aa10.09□□□□□ -0.79
PDXDC1-206ENST00000561930 SENP3-EIF4A1A0A087X0R7 540 aa10.08□□□□□ -0.8
PDXDC1-206ENST00000561930 MYCP01106 439 aaPredicted RBP10.08□□□□□ -0.8
PDXDC1-206ENST00000561930 GPC1P35052 558 aa10.08□□□□□ -0.8
PDXDC1-206ENST00000561930 KRT76Q01546 638 aa10.08□□□□□ -0.8
PDXDC1-206ENST00000561930 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
PDXDC1-206ENST00000561930 GAS2L1Q99501 681 aaPredicted RBP10.06□□□□□ -0.8
PDXDC1-206ENST00000561930 GTF2E1P29083 439 aaPredicted RBP10.05□□□□□ -0.8
PDXDC1-206ENST00000561930 SCTRP47872 440 aa10.05□□□□□ -0.8
PDXDC1-206ENST00000561930 EIF4G2P78344 907 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDXDC1-206ENST00000561930 POU4F2Q12837 409 aa10.05□□□□□ -0.8
PDXDC1-206ENST00000561930 ARHGEF10LQ9HCE6 1279 aa10.04□□□□□ -0.8
PDXDC1-206ENST00000561930 H7C1W4 665 aa10.03□□□□□ -0.8
PDXDC1-206ENST00000561930 RNF225M0QZC1 329 aaPredicted RBP10.03□□□□□ -0.8
PDXDC1-206ENST00000561930 CLN3Q13286 438 aa10.03□□□□□ -0.8
PDXDC1-206ENST00000561930 GMCL1Q96IK5 515 aa10.03□□□□□ -0.8
PDXDC1-206ENST00000561930 CEP126Q9P2H0 1117 aa10.03□□□□□ -0.8
PDXDC1-206ENST00000561930 ADAMTS8Q9UP79 889 aa10.03□□□□□ -0.8
PDXDC1-206ENST00000561930 MARSP56192 900 aaKnown RBP10.02□□□□□ -0.81
PDXDC1-206ENST00000561930 MAP3K10Q02779 954 aa10.02□□□□□ -0.81
PDXDC1-206ENST00000561930 OSBPL3Q9H4L5 887 aa10.02□□□□□ -0.81
PDXDC1-206ENST00000561930 TBC1D2BQ9UPU7 963 aa10.02□□□□□ -0.81
PDXDC1-206ENST00000561930 GNRH1P01148 92 aa10.01□□□□□ -0.81
PDXDC1-206ENST00000561930 SLFNL1Q499Z3 407 aa10.01□□□□□ -0.81
PDXDC1-206ENST00000561930 ZNF385CQ66K41 422 aaPredicted RBP10.01□□□□□ -0.81
PDXDC1-206ENST00000561930 TRIM22Q8IYM9 498 aa10.01□□□□□ -0.81
PDXDC1-206ENST00000561930 TRERF1Q96PN7 1200 aa10.01□□□□□ -0.81
PDXDC1-206ENST00000561930 TIMMDC1Q9NPL8 285 aa10.01□□□□□ -0.81
PDXDC1-206ENST00000561930 RAB6BQ9NRW1 208 aa10.01□□□□□ -0.81
PDXDC1-206ENST00000561930 DYRK1BQ9Y463 629 aa10.01□□□□□ -0.81
PDXDC1-206ENST00000561930 TAS1R3Q7RTX0 852 aa10□□□□□ -0.81
PDXDC1-206ENST00000561930 CUEDC1Q9NWM3 386 aaPredicted RBP10□□□□□ -0.81
PDXDC1-206ENST00000561930 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
PDXDC1-206ENST00000561930 SLURP2P0DP57 97 aa9.99□□□□□ -0.81
PDXDC1-206ENST00000561930 NBPF10Q6P3W6 841 aaKnown RBP9.99□□□□□ -0.81
PDXDC1-206ENST00000561930 NBPF15Q8N660 670 aa9.99□□□□□ -0.81
PDXDC1-206ENST00000561930 CNKSR1Q969H4 720 aa9.99□□□□□ -0.81
PDXDC1-206ENST00000561930 GRIP2Q9C0E4 1043 aa9.99□□□□□ -0.81
PDXDC1-206ENST00000561930 TRAK2O60296 914 aa9.98□□□□□ -0.81
PDXDC1-206ENST00000561930 SRSF11Q05519 484 aaKnown RBP9.98□□□□□ -0.81
PDXDC1-206ENST00000561930 KCNMA1Q12791 1236 aa9.98□□□□□ -0.81
PDXDC1-206ENST00000561930 USP4Q13107 963 aa9.98□□□□□ -0.81
PDXDC1-206ENST00000561930 WHAMMQ8TF30 809 aa9.98□□□□□ -0.81
PDXDC1-206ENST00000561930 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
PDXDC1-206ENST00000561930 ENAMQ9NRM1 1142 aa9.98□□□□□ -0.81
PDXDC1-206ENST00000561930 DOLKQ9UPQ8 538 aa9.98□□□□□ -0.81
PDXDC1-206ENST00000561930 GPR25O00155 361 aa9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 WASLO00401 505 aaPredicted RBP9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 GPR37L1O60883 481 aa9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 ABL2P42684 1182 aa9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 TMEM214Q6NUQ4 689 aaKnown RBP9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 RNF135Q8IUD6 432 aa9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 TMEM151AQ8N4L1 468 aa9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 GTPBP3Q969Y2 492 aaKnown RBP9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 ZSCAN10Q96SZ4 725 aaPredicted RBP9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 CDCA7Q9BWT1 371 aaPredicted RBP9.97□□□□□ -0.81
PDXDC1-206ENST00000561930 CENPCQ03188 943 aa9.96□□□□□ -0.82
PDXDC1-206ENST00000561930 DBN1Q16643 649 aa9.96□□□□□ -0.82
PDXDC1-206ENST00000561930 WDR44Q5JSH3 913 aa9.96□□□□□ -0.82
PDXDC1-206ENST00000561930 GNASQ5JWF2 1037 aa9.96□□□□□ -0.82
PDXDC1-206ENST00000561930 SIRT1Q96EB6 747 aa9.96□□□□□ -0.82
PDXDC1-206ENST00000561930 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
PDXDC1-206ENST00000561930 NSFL1CQ9UNZ2 370 aaKnown RBP9.96□□□□□ -0.82
PDXDC1-206ENST00000561930 RB1CC1Q8TDY2 1594 aa9.96□□□□□ -0.82
PDXDC1-206ENST00000561930 SPATA31C2B4DYI2 1134 aa9.95□□□□□ -0.82
PDXDC1-206ENST00000561930 GDF11O95390 407 aa9.95□□□□□ -0.82
PDXDC1-206ENST00000561930 PHKA2P46019 1235 aa9.95□□□□□ -0.82
PDXDC1-206ENST00000561930 F11P03951 625 aa9.94□□□□□ -0.82
PDXDC1-206ENST00000561930 VAC14Q08AM6 782 aa9.94□□□□□ -0.82
PDXDC1-206ENST00000561930 OXLD1Q5BKU9 147 aa9.94□□□□□ -0.82
PDXDC1-206ENST00000561930 NUCKS1Q9H1E3 243 aaKnown RBP9.94□□□□□ -0.82
PDXDC1-206ENST00000561930 GDPD2Q9HCC8 539 aa9.94□□□□□ -0.82
PDXDC1-206ENST00000561930 IL2RAP01589 272 aa9.93□□□□□ -0.82
PDXDC1-206ENST00000561930 RASSF7Q02833 373 aa9.93□□□□□ -0.82
PDXDC1-206ENST00000561930 SEMA3FQ13275 785 aa9.93□□□□□ -0.82
PDXDC1-206ENST00000561930 WASHC4Q2M389 1173 aa9.93□□□□□ -0.82
PDXDC1-206ENST00000561930 LYPD4Q6UWN0 246 aa9.93□□□□□ -0.82
PDXDC1-206ENST00000561930 SCARF2Q96GP6 870 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms