RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 ACSBG1Q96GR2 724 aa35.01■■■■□ 3.2
MSLN-203ENST00000561896 WASHC2AQ641Q2 1341 aa35.01■■■■□ 3.19
MSLN-203ENST00000561896 BTAF1O14981 1849 aa35■■■■□ 3.19
MSLN-203ENST00000561896 RAPGEF4Q8WZA2 1011 aa34.99■■■■□ 3.19
MSLN-203ENST00000561896 TXNRD1Q16881 649 aa34.98■■■■□ 3.19
MSLN-203ENST00000561896 POLKQ9UBT6 870 aa34.96■■■■□ 3.19
MSLN-203ENST00000561896 NCAPD2Q15021 1401 aa34.96■■■■□ 3.19
MSLN-203ENST00000561896 TATP17735 454 aaPredicted RBP34.95■■■■□ 3.19
MSLN-203ENST00000561896 USHBP1Q8N6Y0 703 aa34.95■■■■□ 3.19
MSLN-203ENST00000561896 PPM1GO15355 546 aaPredicted RBP34.94■■■■□ 3.18
MSLN-203ENST00000561896 ANO8Q9HCE9 1232 aaPredicted RBP34.91■■■■□ 3.18
MSLN-203ENST00000561896 DOT1LQ8TEK3 1739 aa34.9■■■■□ 3.18
MSLN-203ENST00000561896 KIF7Q2M1P5 1343 aa34.9■■■■□ 3.18
MSLN-203ENST00000561896 KNSTRNQ9Y448 316 aa34.88■■■■□ 3.17
MSLN-203ENST00000561896 PCDH11XQ9BZA7 1347 aa34.87■■■■□ 3.17
MSLN-203ENST00000561896 PCDH11YQ9BZA8 1340 aa34.87■■■■□ 3.17
MSLN-203ENST00000561896 PKD1L3Q7Z443 1732 aa34.86■■■■□ 3.17
MSLN-203ENST00000561896 STK32BQ9NY57 414 aa34.85■■■■□ 3.17
MSLN-203ENST00000561896 CASZ1Q86V15 1759 aa34.85■■■■□ 3.17
MSLN-203ENST00000561896 TNNT2P45379 298 aaPredicted RBP34.84■■■■□ 3.17
MSLN-203ENST00000561896 PRIM1P49642 420 aaKnown RBP34.84■■■■□ 3.17
MSLN-203ENST00000561896 SLC15A2Q16348 729 aa34.83■■■■□ 3.17
MSLN-203ENST00000561896 EYA1Q99502 592 aa34.83■■■■□ 3.17
MSLN-203ENST00000561896 PAPPAQ13219 1627 aa34.83■■■■□ 3.17
MSLN-203ENST00000561896 PLEKHG2Q9H7P9 1386 aa34.82■■■■□ 3.16
MSLN-203ENST00000561896 SLC27A3Q5K4L6 730 aa34.81■■■■□ 3.16
MSLN-203ENST00000561896 MORC1Q86VD1 984 aa34.81■■■■□ 3.16
MSLN-203ENST00000561896 SYTL4Q96C24 671 aaPredicted RBP34.81■■■■□ 3.16
MSLN-203ENST00000561896 SPON1Q9HCB6 807 aa34.81■■■■□ 3.16
MSLN-203ENST00000561896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.8■■■■□ 3.16
MSLN-203ENST00000561896 EIF4A2Q14240 407 aaKnown RBP34.79■■■■□ 3.16
MSLN-203ENST00000561896 LY75O60449 1722 aa34.78■■■■□ 3.16
MSLN-203ENST00000561896 AMER1Q5JTC6 1135 aaPredicted RBP34.78■■■■□ 3.16
MSLN-203ENST00000561896 CYP27B1O15528 508 aa34.77■■■■□ 3.16
MSLN-203ENST00000561896 SPG7Q9UQ90 795 aa34.77■■■■□ 3.16
MSLN-203ENST00000561896 LRRC4BQ9NT99 713 aa34.75■■■■□ 3.15
MSLN-203ENST00000561896 NKX1-1Q15270 411 aaPredicted RBP34.73■■■■□ 3.15
MSLN-203ENST00000561896 IGSF1Q8N6C5 1336 aa34.73■■■■□ 3.15
MSLN-203ENST00000561896 PER1O15534 1290 aaPredicted RBP34.72■■■■□ 3.15
MSLN-203ENST00000561896 PDGFDQ9GZP0 370 aaPredicted RBP34.69■■■■□ 3.14
MSLN-203ENST00000561896 QSER1Q2KHR3 1735 aa34.69■■■■□ 3.14
MSLN-203ENST00000561896 ITGB4P16144 1822 aa34.69■■■■□ 3.14
MSLN-203ENST00000561896 TOGARAM1Q9Y4F4 1720 aa34.67■■■■□ 3.14
MSLN-203ENST00000561896 HMGB2P26583 209 aaKnown RBP34.66■■■■□ 3.14
MSLN-203ENST00000561896 AKT1S1Q96B36 256 aa34.66■■■■□ 3.14
MSLN-203ENST00000561896 ZNF827Q17R98 1081 aa34.65■■■■□ 3.14
MSLN-203ENST00000561896 NPC1L1Q9UHC9 1359 aa34.64■■■■□ 3.14
MSLN-203ENST00000561896 IFNL2Q8IZJ0 200 aa34.64■■■■□ 3.14
MSLN-203ENST00000561896 MTFR1LQ9H019 292 aa34.63■■■■□ 3.13
MSLN-203ENST00000561896 PPP1R1BQ9UD71 204 aaPredicted RBP34.63■■■■□ 3.13
MSLN-203ENST00000561896 ZBTB7AO95365 584 aa34.62■■■■□ 3.13
MSLN-203ENST00000561896 CCNL1Q9UK58 526 aaPredicted RBP34.62■■■■□ 3.13
MSLN-203ENST00000561896 MPRIPQ6WCQ1 1025 aa34.61■■■■□ 3.13
MSLN-203ENST00000561896 PHKG2P15735 406 aa34.6■■■■□ 3.13
MSLN-203ENST00000561896 PTGER2P43116 358 aa34.59■■■■□ 3.13
MSLN-203ENST00000561896 SMARCC1Q92922 1105 aaPredicted RBP34.59■■■■□ 3.13
MSLN-203ENST00000561896 PALLDQ8WX93 1383 aa34.57■■■■□ 3.12
MSLN-203ENST00000561896 IL13P35225 146 aa34.56■■■■□ 3.12
MSLN-203ENST00000561896 AMOTQ4VCS5 1084 aa34.56■■■■□ 3.12
MSLN-203ENST00000561896 PLEKHO1Q53GL0 409 aaPredicted RBP34.56■■■■□ 3.12
MSLN-203ENST00000561896 SLC16A10Q8TF71 515 aa34.56■■■■□ 3.12
MSLN-203ENST00000561896 KDRP35968 1356 aa34.56■■■■□ 3.12
MSLN-203ENST00000561896 TUBGCP6Q96RT7 1819 aa34.55■■■■□ 3.12
MSLN-203ENST00000561896 KCNQ4P56696 695 aa34.55■■■■□ 3.12
MSLN-203ENST00000561896 PIGBQ92521 554 aa34.55■■■■□ 3.12
MSLN-203ENST00000561896 ATF5Q9Y2D1 282 aaPredicted RBP34.55■■■■□ 3.12
MSLN-203ENST00000561896 MTHFSP49914 203 aa34.54■■■■□ 3.12
MSLN-203ENST00000561896 C5P01031 1676 aa34.54■■■■□ 3.12
MSLN-203ENST00000561896 TAF1LQ8IZX4 1826 aa34.53■■■■□ 3.12
MSLN-203ENST00000561896 HSP90AB1P08238 724 aaKnown RBP34.53■■■■□ 3.12
MSLN-203ENST00000561896 CC2D1BQ5T0F9 858 aaKnown RBP34.53■■■■□ 3.12
MSLN-203ENST00000561896 SGIP1Q9BQI5 828 aa34.53■■■■□ 3.12
MSLN-203ENST00000561896 TFCP2L1Q9NZI6 479 aa34.53■■■■□ 3.12
MSLN-203ENST00000561896 PNPLA7Q6ZV29 1317 aa34.52■■■■□ 3.12
MSLN-203ENST00000561896 TMOD3Q9NYL9 352 aa34.51■■■■□ 3.12
MSLN-203ENST00000561896 SULT6B1Q6IMI4 303 aa34.49■■■■□ 3.11
MSLN-203ENST00000561896 AEBP1Q8IUX7 1158 aa34.49■■■■□ 3.11
MSLN-203ENST00000561896 DCAF5Q96JK2 942 aa34.49■■■■□ 3.11
MSLN-203ENST00000561896 COL24A1Q17RW2 1714 aa34.49■■■■□ 3.11
MSLN-203ENST00000561896 ERVV-2B6SEH9 535 aa34.48■■■■□ 3.11
MSLN-203ENST00000561896 ZNF530Q6P9A1 599 aaPredicted RBP34.45■■■■□ 3.11
MSLN-203ENST00000561896 C4BP0C0L5 1744 aa34.41■■■■□ 3.1
MSLN-203ENST00000561896 DIAPH1O60610 1272 aaKnown RBP34.41■■■■□ 3.1
MSLN-203ENST00000561896 LOC102724428A0A0B4J2F2 783 aa34.4■■■■□ 3.1
MSLN-203ENST00000561896 SIK1P57059 783 aa34.4■■■■□ 3.1
MSLN-203ENST00000561896 C1orf141Q5JVX7 400 aa34.4■■■■□ 3.1
MSLN-203ENST00000561896 FLAD1Q8NFF5 587 aa34.4■■■■□ 3.1
MSLN-203ENST00000561896 ARXQ96QS3 562 aa34.4■■■■□ 3.1
MSLN-203ENST00000561896 ASAP1Q9ULH1 1129 aa34.4■■■■□ 3.1
MSLN-203ENST00000561896 KDM6AO15550 1401 aaPredicted RBP34.39■■■■□ 3.1
MSLN-203ENST00000561896 ATG3Q9NT62 314 aa34.38■■■■□ 3.09
MSLN-203ENST00000561896 MAP3K5Q99683 1374 aa34.37■■■■□ 3.09
MSLN-203ENST00000561896 ZNF831Q5JPB2 1677 aa34.37■■■■□ 3.09
MSLN-203ENST00000561896 COL3A1P02461 1466 aaPredicted RBP34.36■■■■□ 3.09
MSLN-203ENST00000561896 POLD1P28340 1107 aa34.36■■■■□ 3.09
MSLN-203ENST00000561896 COL23A1Q86Y22 540 aaPredicted RBP34.36■■■■□ 3.09
MSLN-203ENST00000561896 FHDC1Q9C0D6 1143 aaPredicted RBP34.36■■■■□ 3.09
MSLN-203ENST00000561896 DCAF8L1A6NGE4 600 aa34.35■■■■□ 3.09
MSLN-203ENST00000561896 SYT17Q9BSW7 474 aa34.35■■■■□ 3.09
MSLN-203ENST00000561896 UBR3Q6ZT12 1888 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms