RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 HOXC9P31274 260 aa13.9□□□□□ -0.18
VAC14-203ENST00000561879 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
VAC14-203ENST00000561879 LRRC59Q96AG4 307 aaKnown RBP13.9□□□□□ -0.18
VAC14-203ENST00000561879 SHPRHQ149N8 1683 aa13.9□□□□□ -0.18
VAC14-203ENST00000561879 SOX12O15370 315 aa13.89□□□□□ -0.19
VAC14-203ENST00000561879 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
VAC14-203ENST00000561879 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
VAC14-203ENST00000561879 PLEKHF1Q96S99 279 aa13.89□□□□□ -0.19
VAC14-203ENST00000561879 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
VAC14-203ENST00000561879 CERKQ8TCT0 537 aa13.88□□□□□ -0.19
VAC14-203ENST00000561879 PHF12Q96QT6 1004 aa13.88□□□□□ -0.19
VAC14-203ENST00000561879 NHSL1Q5SYE7 1610 aa13.88□□□□□ -0.19
VAC14-203ENST00000561879 CPDO75976 1380 aa13.87□□□□□ -0.19
VAC14-203ENST00000561879 MED1Q15648 1581 aaPredicted RBP13.87□□□□□ -0.19
VAC14-203ENST00000561879 AHDC1Q5TGY3 1603 aaPredicted RBP13.86□□□□□ -0.19
VAC14-203ENST00000561879 APAF1O14727 1248 aa13.86□□□□□ -0.19
VAC14-203ENST00000561879 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
VAC14-203ENST00000561879 RSPH6AQ9H0K4 717 aa13.86□□□□□ -0.19
VAC14-203ENST00000561879 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
VAC14-203ENST00000561879 PEAK1Q9H792 1746 aa13.85□□□□□ -0.19
VAC14-203ENST00000561879 UBAP1LF5GYI3 381 aa13.85□□□□□ -0.19
VAC14-203ENST00000561879 PPP1R37O75864 691 aa13.85□□□□□ -0.19
VAC14-203ENST00000561879 NEFMP07197 916 aa13.85□□□□□ -0.19
VAC14-203ENST00000561879 CCDC146Q8IYE0 955 aa13.85□□□□□ -0.19
VAC14-203ENST00000561879 TCP11L2Q8N4U5 519 aa13.85□□□□□ -0.19
VAC14-203ENST00000561879 ROBO1Q9Y6N7 1651 aa13.84□□□□□ -0.19
VAC14-203ENST00000561879 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
VAC14-203ENST00000561879 ZNF521Q96K83 1311 aa13.84□□□□□ -0.19
VAC14-203ENST00000561879 EYA1Q99502 592 aa13.83□□□□□ -0.2
VAC14-203ENST00000561879 ABCC6O95255 1503 aa13.83□□□□□ -0.2
VAC14-203ENST00000561879 MAPK8IP3Q9UPT6 1336 aa13.83□□□□□ -0.2
VAC14-203ENST00000561879 KDRP35968 1356 aa13.83□□□□□ -0.2
VAC14-203ENST00000561879 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
VAC14-203ENST00000561879 ZC3H6P61129 1189 aaKnown RBP13.82□□□□□ -0.2
VAC14-203ENST00000561879 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
VAC14-203ENST00000561879 CABLES1Q8TDN4 633 aa13.82□□□□□ -0.2
VAC14-203ENST00000561879 HMOX1P09601 288 aa13.81□□□□□ -0.2
VAC14-203ENST00000561879 TMPOP42166 694 aaKnown RBP13.81□□□□□ -0.2
VAC14-203ENST00000561879 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
VAC14-203ENST00000561879 WDR63Q8IWG1 891 aa13.8□□□□□ -0.2
VAC14-203ENST00000561879 WWC1Q8IX03 1113 aa13.8□□□□□ -0.2
VAC14-203ENST00000561879 WDR70Q9NW82 654 aa13.8□□□□□ -0.2
VAC14-203ENST00000561879 AXIN2Q9Y2T1 843 aa13.8□□□□□ -0.2
VAC14-203ENST00000561879 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
VAC14-203ENST00000561879 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
VAC14-203ENST00000561879 ANKRD24Q8TF21 1146 aa13.79□□□□□ -0.2
VAC14-203ENST00000561879 SALL2Q9Y467 1007 aaPredicted RBP13.79□□□□□ -0.2
VAC14-203ENST00000561879 KIAA0232Q92628 1395 aa13.79□□□□□ -0.2
VAC14-203ENST00000561879 CRYBG1Q9Y4K1 1723 aa13.78□□□□□ -0.2
VAC14-203ENST00000561879 LTN1O94822 1766 aa13.78□□□□□ -0.2
VAC14-203ENST00000561879 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
VAC14-203ENST00000561879 KCNV2Q8TDN2 545 aa13.78□□□□□ -0.2
VAC14-203ENST00000561879 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
VAC14-203ENST00000561879 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
VAC14-203ENST00000561879 ERBB3P21860 1342 aa13.77□□□□□ -0.21
VAC14-203ENST00000561879 RIPK4P57078 832 aa13.77□□□□□ -0.21
VAC14-203ENST00000561879 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
VAC14-203ENST00000561879 AEBP1Q8IUX7 1158 aa13.77□□□□□ -0.21
VAC14-203ENST00000561879 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.21
VAC14-203ENST00000561879 LTV1Q96GA3 475 aaPredicted RBP13.77□□□□□ -0.21
VAC14-203ENST00000561879 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
VAC14-203ENST00000561879 PRDM11Q9NQV5 511 aa13.77□□□□□ -0.21
VAC14-203ENST00000561879 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
VAC14-203ENST00000561879 E9PSI1 815 aa13.76□□□□□ -0.21
VAC14-203ENST00000561879 SLFN5Q08AF3 891 aa13.76□□□□□ -0.21
VAC14-203ENST00000561879 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
VAC14-203ENST00000561879 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
VAC14-203ENST00000561879 COL22A1Q8NFW1 1626 aaPredicted RBP13.75□□□□□ -0.21
VAC14-203ENST00000561879 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
VAC14-203ENST00000561879 IL16Q14005 1332 aa13.75□□□□□ -0.21
VAC14-203ENST00000561879 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
VAC14-203ENST00000561879 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
VAC14-203ENST00000561879 COL18A1P39060 1754 aa13.75□□□□□ -0.21
VAC14-203ENST00000561879 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
VAC14-203ENST00000561879 SENP3-EIF4A1A0A087X0R7 540 aa13.74□□□□□ -0.21
VAC14-203ENST00000561879 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
VAC14-203ENST00000561879 HTATSF1O43719 755 aaKnown RBP13.74□□□□□ -0.21
VAC14-203ENST00000561879 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
VAC14-203ENST00000561879 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
VAC14-203ENST00000561879 CHRNA2Q15822 529 aa13.74□□□□□ -0.21
VAC14-203ENST00000561879 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
VAC14-203ENST00000561879 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
VAC14-203ENST00000561879 PHLPP1O60346 1717 aa13.73□□□□□ -0.21
VAC14-203ENST00000561879 AMOTQ4VCS5 1084 aa13.73□□□□□ -0.21
VAC14-203ENST00000561879 CDCA7LQ96GN5 454 aa13.73□□□□□ -0.21
VAC14-203ENST00000561879 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
VAC14-203ENST00000561879 TRPC6Q9Y210 931 aa13.73□□□□□ -0.21
VAC14-203ENST00000561879 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
VAC14-203ENST00000561879 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
VAC14-203ENST00000561879 JCADQ9P266 1359 aa13.71□□□□□ -0.21
VAC14-203ENST00000561879 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.21
VAC14-203ENST00000561879 CSB-PGBD3P0DP91 1061 aa13.71□□□□□ -0.21
VAC14-203ENST00000561879 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
VAC14-203ENST00000561879 MYH16Q9H6N6 1097 aa13.71□□□□□ -0.21
VAC14-203ENST00000561879 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
VAC14-203ENST00000561879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.21
VAC14-203ENST00000561879 CAMTA1Q9Y6Y1 1673 aa13.7□□□□□ -0.22
VAC14-203ENST00000561879 PLEKHO1Q53GL0 409 aaPredicted RBP13.7□□□□□ -0.22
VAC14-203ENST00000561879 CARD10Q9BWT7 1032 aa13.7□□□□□ -0.22
VAC14-203ENST00000561879 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms