RNA–Protein interactions for RNA: ENST00000561838.1

ITGAM-203, Transcript of integrin subunit alpha M, humanhuman

TSL 4

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-203ENST00000561838 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
ITGAM-203ENST00000561838 CGNL1Q0VF96 1302 aa18.38■□□□□ 0.53
ITGAM-203ENST00000561838 NEUROD1Q13562 356 aa18.37■□□□□ 0.53
ITGAM-203ENST00000561838 CCNL1Q9UK58 526 aaPredicted RBP18.37■□□□□ 0.53
ITGAM-203ENST00000561838 A0A1W2PP64 1363 aa18.36■□□□□ 0.53
ITGAM-203ENST00000561838 IFFO2Q5TF58 517 aa18.36■□□□□ 0.53
ITGAM-203ENST00000561838 FLAD1Q8NFF5 587 aa18.36■□□□□ 0.53
ITGAM-203ENST00000561838 COG3Q96JB2 828 aa18.36■□□□□ 0.53
ITGAM-203ENST00000561838 USP47Q96K76 1375 aa18.35■□□□□ 0.53
ITGAM-203ENST00000561838 AMPHP49418 695 aa18.35■□□□□ 0.53
ITGAM-203ENST00000561838 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
ITGAM-203ENST00000561838 TUBGCP6Q96RT7 1819 aa18.35■□□□□ 0.53
ITGAM-203ENST00000561838 HOXC9P31274 260 aa18.34■□□□□ 0.53
ITGAM-203ENST00000561838 NLGN2Q8NFZ4 835 aa18.34■□□□□ 0.53
ITGAM-203ENST00000561838 CD2APQ9Y5K6 639 aa18.34■□□□□ 0.53
ITGAM-203ENST00000561838 DOT1LQ8TEK3 1739 aa18.33■□□□□ 0.52
ITGAM-203ENST00000561838 MSH5O43196 834 aa18.33■□□□□ 0.52
ITGAM-203ENST00000561838 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
ITGAM-203ENST00000561838 RTL1A6NKG5 1358 aa18.32■□□□□ 0.52
ITGAM-203ENST00000561838 NSD2O96028 1365 aa18.32■□□□□ 0.52
ITGAM-203ENST00000561838 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
ITGAM-203ENST00000561838 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
ITGAM-203ENST00000561838 YBX3P16989 372 aaKnown RBP eCLIP18.3■□□□□ 0.52
ITGAM-203ENST00000561838 KCNQ4P56696 695 aa18.3■□□□□ 0.52
ITGAM-203ENST00000561838 RAPGEF4Q8WZA2 1011 aa18.29■□□□□ 0.52
ITGAM-203ENST00000561838 SMG6Q86US8 1419 aaKnown RBP18.29■□□□□ 0.52
ITGAM-203ENST00000561838 GPBP1L1Q9HC44 474 aaPredicted RBP18.27■□□□□ 0.52
ITGAM-203ENST00000561838 MEGF6O75095 1541 aa18.27■□□□□ 0.51
ITGAM-203ENST00000561838 ATP10DQ9P241 1426 aa18.26■□□□□ 0.51
ITGAM-203ENST00000561838 TATP17735 454 aaPredicted RBP18.26■□□□□ 0.51
ITGAM-203ENST00000561838 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
ITGAM-203ENST00000561838 PCDH11XQ9BZA7 1347 aa18.25■□□□□ 0.51
ITGAM-203ENST00000561838 PCDH11YQ9BZA8 1340 aa18.25■□□□□ 0.51
ITGAM-203ENST00000561838 NSD3Q9BZ95 1437 aa18.25■□□□□ 0.51
ITGAM-203ENST00000561838 NBPF6Q5VWK0 638 aa18.25■□□□□ 0.51
ITGAM-203ENST00000561838 NBPF4Q96M43 638 aa18.25■□□□□ 0.51
ITGAM-203ENST00000561838 GOLGB1Q14789 3259 aaKnown RBP18.25■□□□□ 0.51
ITGAM-203ENST00000561838 C5P01031 1676 aa18.25■□□□□ 0.51
ITGAM-203ENST00000561838 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
ITGAM-203ENST00000561838 RGPD2P0DJD1 1756 aa18.24■□□□□ 0.51
ITGAM-203ENST00000561838 PALLDQ8WX93 1383 aa18.22■□□□□ 0.51
ITGAM-203ENST00000561838 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
ITGAM-203ENST00000561838 TESK2Q96S53 571 aa18.22■□□□□ 0.51
ITGAM-203ENST00000561838 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
ITGAM-203ENST00000561838 HSPA6P17066 643 aa18.21■□□□□ 0.51
ITGAM-203ENST00000561838 AK7Q96M32 723 aa18.21■□□□□ 0.51
ITGAM-203ENST00000561838 TAF1LQ8IZX4 1826 aa18.21■□□□□ 0.51
ITGAM-203ENST00000561838 CEP350Q5VT06 3117 aa18.21■□□□□ 0.5
ITGAM-203ENST00000561838 ADCY9O60503 1353 aa18.2■□□□□ 0.5
ITGAM-203ENST00000561838 INSRP06213 1382 aa18.2■□□□□ 0.5
ITGAM-203ENST00000561838 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
ITGAM-203ENST00000561838 FYB1O15117 783 aa18.19■□□□□ 0.5
ITGAM-203ENST00000561838 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
ITGAM-203ENST00000561838 FLT4P35916 1363 aa18.18■□□□□ 0.5
ITGAM-203ENST00000561838 RRS1Q15050 365 aaKnown RBP18.18■□□□□ 0.5
ITGAM-203ENST00000561838 FBLN1P23142 703 aa18.17■□□□□ 0.5
ITGAM-203ENST00000561838 SSFA2P28290 1259 aa18.17■□□□□ 0.5
ITGAM-203ENST00000561838 C4BP0C0L5 1744 aa18.17■□□□□ 0.5
ITGAM-203ENST00000561838 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
ITGAM-203ENST00000561838 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
ITGAM-203ENST00000561838 TMF1P82094 1093 aa18.15■□□□□ 0.5
ITGAM-203ENST00000561838 NKX1-1Q15270 411 aaPredicted RBP18.15■□□□□ 0.5
ITGAM-203ENST00000561838 GGNBP2Q9H3C7 697 aa18.15■□□□□ 0.5
ITGAM-203ENST00000561838 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
ITGAM-203ENST00000561838 CYP27B1O15528 508 aa18.14■□□□□ 0.49
ITGAM-203ENST00000561838 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
ITGAM-203ENST00000561838 SPG7Q9UQ90 795 aa18.14■□□□□ 0.49
ITGAM-203ENST00000561838 UBR3Q6ZT12 1888 aa18.14■□□□□ 0.49
ITGAM-203ENST00000561838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
ITGAM-203ENST00000561838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.13■□□□□ 0.49
ITGAM-203ENST00000561838 ITGB4P16144 1822 aa18.13■□□□□ 0.49
ITGAM-203ENST00000561838 PIGBQ92521 554 aa18.12■□□□□ 0.49
ITGAM-203ENST00000561838 LOC102724428A0A0B4J2F2 783 aa18.11■□□□□ 0.49
ITGAM-203ENST00000561838 SIK1P57059 783 aa18.11■□□□□ 0.49
ITGAM-203ENST00000561838 ZNF526Q8TF50 670 aaPredicted RBP18.11■□□□□ 0.49
ITGAM-203ENST00000561838 PKD1L3Q7Z443 1732 aa18.11■□□□□ 0.49
ITGAM-203ENST00000561838 PHF14O94880 888 aa18.1■□□□□ 0.49
ITGAM-203ENST00000561838 NCAPD2Q15021 1401 aa18.09■□□□□ 0.49
ITGAM-203ENST00000561838 PLEKHG2Q9H7P9 1386 aa18.09■□□□□ 0.49
ITGAM-203ENST00000561838 APLP1P51693 650 aa18.09■□□□□ 0.49
ITGAM-203ENST00000561838 TGFB2P61812 414 aa18.09■□□□□ 0.49
ITGAM-203ENST00000561838 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
ITGAM-203ENST00000561838 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
ITGAM-203ENST00000561838 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
ITGAM-203ENST00000561838 KIF3CO14782 793 aa18.08■□□□□ 0.48
ITGAM-203ENST00000561838 TOGARAM1Q9Y4F4 1720 aa18.08■□□□□ 0.48
ITGAM-203ENST00000561838 MAP2P11137 1827 aaKnown RBP18.07■□□□□ 0.48
ITGAM-203ENST00000561838 GNPATO15228 680 aa18.06■□□□□ 0.48
ITGAM-203ENST00000561838 IFNL2Q8IZJ0 200 aa18.06■□□□□ 0.48
ITGAM-203ENST00000561838 NLGN1Q8N2Q7 840 aa18.06■□□□□ 0.48
ITGAM-203ENST00000561838 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
ITGAM-203ENST00000561838 WASHC2AQ641Q2 1341 aa18.05■□□□□ 0.48
ITGAM-203ENST00000561838 TOMM70O94826 608 aa18.05■□□□□ 0.48
ITGAM-203ENST00000561838 ATP6V1AP38606 617 aa18.05■□□□□ 0.48
ITGAM-203ENST00000561838 AMIGO3Q86WK7 504 aa18.05■□□□□ 0.48
ITGAM-203ENST00000561838 ADRA2BP18089 450 aa18.04■□□□□ 0.48
ITGAM-203ENST00000561838 KIF13BQ9NQT8 1826 aa18.03■□□□□ 0.48
ITGAM-203ENST00000561838 MMP10P09238 476 aa18.03■□□□□ 0.48
ITGAM-203ENST00000561838 TRAPPC3LQ5T215 181 aa18.03■□□□□ 0.48
ITGAM-203ENST00000561838 RTCBQ9Y3I0 505 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms