RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 PARD3Q8TEW0 1356 aa25.08■■□□□ 1.61
PPP4C-202ENST00000561610 DCAF8L1A6NGE4 600 aa25.08■■□□□ 1.6
PPP4C-202ENST00000561610 PPP1R1BQ9UD71 204 aaPredicted RBP25.08■■□□□ 1.6
PPP4C-202ENST00000561610 U2SURPO15042 1029 aaKnown RBP25.07■■□□□ 1.6
PPP4C-202ENST00000561610 IL13P35225 146 aa25.06■■□□□ 1.6
PPP4C-202ENST00000561610 DDX54Q8TDD1 881 aaKnown RBP25.06■■□□□ 1.6
PPP4C-202ENST00000561610 MEGF6O75095 1541 aa25.05■■□□□ 1.6
PPP4C-202ENST00000561610 TNS2Q63HR2 1409 aa25.05■■□□□ 1.6
PPP4C-202ENST00000561610 FAM196AQ6ZSG2 479 aa25.04■■□□□ 1.6
PPP4C-202ENST00000561610 ZCRB1Q8TBF4 217 aaKnown RBP25.04■■□□□ 1.6
PPP4C-202ENST00000561610 TRIM37O94972 964 aa25.03■■□□□ 1.6
PPP4C-202ENST00000561610 SULT6B1Q6IMI4 303 aa25.03■■□□□ 1.6
PPP4C-202ENST00000561610 IGSF1Q8N6C5 1336 aa25.03■■□□□ 1.6
PPP4C-202ENST00000561610 HMOX1P09601 288 aa25.02■■□□□ 1.6
PPP4C-202ENST00000561610 MARCH10Q8NA82 808 aaPredicted RBP25.02■■□□□ 1.6
PPP4C-202ENST00000561610 CAMKK2Q96RR4 588 aa25.01■■□□□ 1.59
PPP4C-202ENST00000561610 NUDCQ9Y266 331 aa25.01■■□□□ 1.59
PPP4C-202ENST00000561610 OVOS2A0A0G2JMS6 1433 aa25■■□□□ 1.59
PPP4C-202ENST00000561610 MYBBP1AQ9BQG0 1328 aaKnown RBP25■■□□□ 1.59
PPP4C-202ENST00000561610 AEBP1Q8IUX7 1158 aa25■■□□□ 1.59
PPP4C-202ENST00000561610 APBA3O96018 575 aa24.99■■□□□ 1.59
PPP4C-202ENST00000561610 ANP32CO43423 234 aa24.98■■□□□ 1.59
PPP4C-202ENST00000561610 PRKRIP1Q9H875 184 aaPredicted RBP24.98■■□□□ 1.59
PPP4C-202ENST00000561610 SPG7Q9UQ90 795 aa24.98■■□□□ 1.59
PPP4C-202ENST00000561610 COL3A1P02461 1466 aaPredicted RBP24.98■■□□□ 1.59
PPP4C-202ENST00000561610 NUP188Q5SRE5 1749 aa24.97■■□□□ 1.59
PPP4C-202ENST00000561610 RREB1Q92766 1687 aa24.96■■□□□ 1.59
PPP4C-202ENST00000561610 SENP3-EIF4A1A0A087X0R7 540 aa24.95■■□□□ 1.58
PPP4C-202ENST00000561610 ACSBG1Q96GR2 724 aa24.95■■□□□ 1.58
PPP4C-202ENST00000561610 NCAPD2Q15021 1401 aa24.95■■□□□ 1.58
PPP4C-202ENST00000561610 KAT6BQ8WYB5 2073 aa24.95■■□□□ 1.58
PPP4C-202ENST00000561610 PCDH11XQ9BZA7 1347 aa24.95■■□□□ 1.58
PPP4C-202ENST00000561610 PCDH11YQ9BZA8 1340 aa24.95■■□□□ 1.58
PPP4C-202ENST00000561610 U2AF1L5P0DN76 240 aaPredicted RBP24.94■■□□□ 1.58
PPP4C-202ENST00000561610 U2AF1Q01081 240 aaKnown RBP eCLIP24.94■■□□□ 1.58
PPP4C-202ENST00000561610 NBPF14Q5TI25 921 aa24.94■■□□□ 1.58
PPP4C-202ENST00000561610 SPON1Q9HCB6 807 aa24.94■■□□□ 1.58
PPP4C-202ENST00000561610 PLEKHO1Q53GL0 409 aaPredicted RBP24.93■■□□□ 1.58
PPP4C-202ENST00000561610 SYTL4Q96C24 671 aaPredicted RBP24.91■■□□□ 1.58
PPP4C-202ENST00000561610 SHANK3Q9BYB0 1731 aa24.91■■□□□ 1.58
PPP4C-202ENST00000561610 PKD1L3Q7Z443 1732 aa24.89■■□□□ 1.57
PPP4C-202ENST00000561610 KCNQ2O43526 872 aa24.88■■□□□ 1.57
PPP4C-202ENST00000561610 AMOTQ4VCS5 1084 aa24.88■■□□□ 1.57
PPP4C-202ENST00000561610 ZNF530Q6P9A1 599 aaPredicted RBP24.88■■□□□ 1.57
PPP4C-202ENST00000561610 KDRP35968 1356 aa24.88■■□□□ 1.57
PPP4C-202ENST00000561610 C1orf141Q5JVX7 400 aa24.87■■□□□ 1.57
PPP4C-202ENST00000561610 IFNL2Q8IZJ0 200 aa24.87■■□□□ 1.57
PPP4C-202ENST00000561610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.87■■□□□ 1.57
PPP4C-202ENST00000561610 CYP27B1O15528 508 aa24.86■■□□□ 1.57
PPP4C-202ENST00000561610 SBF2Q86WG5 1849 aa24.86■■□□□ 1.57
PPP4C-202ENST00000561610 PRKAR2BP31323 418 aa24.86■■□□□ 1.57
PPP4C-202ENST00000561610 ZNF784Q8NCA9 323 aaPredicted RBP24.86■■□□□ 1.57
PPP4C-202ENST00000561610 NEFMP07197 916 aa24.85■■□□□ 1.57
PPP4C-202ENST00000561610 PHKG2P15735 406 aa24.84■■□□□ 1.57
PPP4C-202ENST00000561610 WDR43Q15061 677 aaKnown RBP eCLIP24.84■■□□□ 1.571e-7■■□□□ 13.3
PPP4C-202ENST00000561610 BCL11BQ9C0K0 894 aaPredicted RBP24.84■■□□□ 1.57
PPP4C-202ENST00000561610 DOT1LQ8TEK3 1739 aa24.83■■□□□ 1.57
PPP4C-202ENST00000561610 PRIM1P49642 420 aaKnown RBP24.82■■□□□ 1.56
PPP4C-202ENST00000561610 IFFO2Q5TF58 517 aa24.82■■□□□ 1.56
PPP4C-202ENST00000561610 PTF1AQ7RTS3 328 aa24.82■■□□□ 1.56
PPP4C-202ENST00000561610 BCL9O00512 1426 aa24.81■■□□□ 1.56
PPP4C-202ENST00000561610 RSPH6AQ9H0K4 717 aa24.81■■□□□ 1.56
PPP4C-202ENST00000561610 NHSQ6T4R5 1651 aa24.8■■□□□ 1.56
PPP4C-202ENST00000561610 FCHSD2O94868 740 aa24.8■■□□□ 1.56
PPP4C-202ENST00000561610 HSP90AB1P08238 724 aaKnown RBP24.8■■□□□ 1.56
PPP4C-202ENST00000561610 MTHFSDQ2M296 383 aaKnown RBP24.8■■□□□ 1.56
PPP4C-202ENST00000561610 PLEKHG2Q9H7P9 1386 aa24.8■■□□□ 1.56
PPP4C-202ENST00000561610 MPRIPQ6WCQ1 1025 aa24.78■■□□□ 1.56
PPP4C-202ENST00000561610 PNNQ9H307 717 aaKnown RBP24.78■■□□□ 1.56
PPP4C-202ENST00000561610 GAS2L2Q8NHY3 880 aa24.77■■□□□ 1.56
PPP4C-202ENST00000561610 MAPK8IP3Q9UPT6 1336 aa24.76■■□□□ 1.55
PPP4C-202ENST00000561610 AKAP4Q5JQC9 854 aa24.76■■□□□ 1.55
PPP4C-202ENST00000561610 NKX1-1Q15270 411 aaPredicted RBP24.75■■□□□ 1.55
PPP4C-202ENST00000561610 DCAF5Q96JK2 942 aa24.75■■□□□ 1.55
PPP4C-202ENST00000561610 PHACTR3Q96KR7 559 aa24.75■■□□□ 1.55
PPP4C-202ENST00000561610 MRS2Q9HD23 443 aa24.75■■□□□ 1.55
PPP4C-202ENST00000561610 TMOD3Q9NYL9 352 aa24.74■■□□□ 1.55
PPP4C-202ENST00000561610 BTAF1O14981 1849 aa24.74■■□□□ 1.55
PPP4C-202ENST00000561610 C1QTNF8P60827 252 aa24.73■■□□□ 1.55
PPP4C-202ENST00000561610 TOGARAM1Q9Y4F4 1720 aa24.72■■□□□ 1.55
PPP4C-202ENST00000561610 CABP4P57796 275 aa24.72■■□□□ 1.55
PPP4C-202ENST00000561610 CCDC184Q52MB2 194 aa24.72■■□□□ 1.55
PPP4C-202ENST00000561610 CCDC146Q8IYE0 955 aa24.71■■□□□ 1.55
PPP4C-202ENST00000561610 ITGB4P16144 1822 aa24.71■■□□□ 1.55
PPP4C-202ENST00000561610 DIEXFQ68CQ4 756 aaKnown RBP24.7■■□□□ 1.54
PPP4C-202ENST00000561610 GNAT3A8MTJ3 354 aa24.69■■□□□ 1.54
PPP4C-202ENST00000561610 MAP3K5Q99683 1374 aa24.69■■□□□ 1.54
PPP4C-202ENST00000561610 KDM6AO15550 1401 aaPredicted RBP24.68■■□□□ 1.54
PPP4C-202ENST00000561610 CASZ1Q86V15 1759 aa24.68■■□□□ 1.54
PPP4C-202ENST00000561610 PLSCR1O15162 318 aa24.68■■□□□ 1.54
PPP4C-202ENST00000561610 ZBTB7AO95365 584 aa24.68■■□□□ 1.54
PPP4C-202ENST00000561610 RTF1Q92541 710 aaKnown RBP24.68■■□□□ 1.54
PPP4C-202ENST00000561610 ANO8Q9HCE9 1232 aaPredicted RBP24.68■■□□□ 1.54
PPP4C-202ENST00000561610 ADAMTS8Q9UP79 889 aa24.68■■□□□ 1.54
PPP4C-202ENST00000561610 ERVV-2B6SEH9 535 aa24.67■■□□□ 1.54
PPP4C-202ENST00000561610 RNMTO43148 476 aaKnown RBP24.67■■□□□ 1.54
PPP4C-202ENST00000561610 PIGBQ92521 554 aa24.67■■□□□ 1.54
PPP4C-202ENST00000561610 LGR6Q9HBX8 967 aa24.67■■□□□ 1.54
PPP4C-202ENST00000561610 TXNRD1Q16881 649 aa24.65■■□□□ 1.54
PPP4C-202ENST00000561610 PLEKHF1Q96S99 279 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms