RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 PCDHB11Q9Y5F2 797 aa8.59□□□□□ -1.03
CASC4-211ENST00000561305 SENP3-EIF4A1A0A087X0R7 540 aa8.58□□□□□ -1.04
CASC4-211ENST00000561305 TRAK2O60296 914 aa8.58□□□□□ -1.04
CASC4-211ENST00000561305 GPC1P35052 558 aa8.58□□□□□ -1.04
CASC4-211ENST00000561305 SCTRP47872 440 aa8.58□□□□□ -1.04
CASC4-211ENST00000561305 LYSMD3Q7Z3D4 306 aa8.58□□□□□ -1.04
CASC4-211ENST00000561305 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
CASC4-211ENST00000561305 A0A1W2PRU2 124 aa8.57□□□□□ -1.04
CASC4-211ENST00000561305 ITGA6P23229 1130 aa8.57□□□□□ -1.04
CASC4-211ENST00000561305 CYP2U1Q7Z449 544 aa8.57□□□□□ -1.04
CASC4-211ENST00000561305 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
CASC4-211ENST00000561305 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
CASC4-211ENST00000561305 MCM6Q14566 821 aa8.56□□□□□ -1.04
CASC4-211ENST00000561305 PHTF2Q8N3S3 785 aa8.56□□□□□ -1.04
CASC4-211ENST00000561305 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
CASC4-211ENST00000561305 GDPD2Q9HCC8 539 aa8.56□□□□□ -1.04
CASC4-211ENST00000561305 FAM181BA6NEQ2 426 aa8.54□□□□□ -1.04
CASC4-211ENST00000561305 MEN1O00255 615 aa8.54□□□□□ -1.04
CASC4-211ENST00000561305 KRT76Q01546 638 aa8.54□□□□□ -1.04
CASC4-211ENST00000561305 CLN3Q13286 438 aa8.54□□□□□ -1.04
CASC4-211ENST00000561305 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
CASC4-211ENST00000561305 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
CASC4-211ENST00000561305 WASHC4Q2M389 1173 aa8.53□□□□□ -1.04
CASC4-211ENST00000561305 GRIP2Q9C0E4 1043 aa8.53□□□□□ -1.04
CASC4-211ENST00000561305 CHIC2Q9UKJ5 165 aa8.53□□□□□ -1.04
CASC4-211ENST00000561305 GNRH1P01148 92 aa8.52□□□□□ -1.05
CASC4-211ENST00000561305 ABL2P42684 1182 aa8.52□□□□□ -1.05
CASC4-211ENST00000561305 VAC14Q08AM6 782 aa8.52□□□□□ -1.05
CASC4-211ENST00000561305 SV2AQ7L0J3 742 aa8.52□□□□□ -1.05
CASC4-211ENST00000561305 VWA5B2Q8N398 1253 aa8.52□□□□□ -1.05
CASC4-211ENST00000561305 NLRP3Q96P20 1036 aa8.52□□□□□ -1.05
CASC4-211ENST00000561305 RHOQP17081 205 aa8.51□□□□□ -1.05
CASC4-211ENST00000561305 TSGA10IPQ3SY00 556 aa8.51□□□□□ -1.05
CASC4-211ENST00000561305 COL25A1Q9BXS0 654 aaPredicted RBP8.51□□□□□ -1.05
CASC4-211ENST00000561305 ESF1Q9H501 851 aaKnown RBP8.51□□□□□ -1.05
CASC4-211ENST00000561305 ARHGEF10LQ9HCE6 1279 aa8.51□□□□□ -1.05
CASC4-211ENST00000561305 SPATA31C2B4DYI2 1134 aa8.5□□□□□ -1.05
CASC4-211ENST00000561305 MYCP01106 439 aaPredicted RBP8.5□□□□□ -1.05
CASC4-211ENST00000561305 CNTNAP3BQ96NU0 1288 aa8.5□□□□□ -1.05
CASC4-211ENST00000561305 CNTNAP3Q9BZ76 1288 aa8.5□□□□□ -1.05
CASC4-211ENST00000561305 CUEDC1Q9NWM3 386 aaPredicted RBP8.5□□□□□ -1.05
CASC4-211ENST00000561305 CDC14CA4D256 554 aa8.49□□□□□ -1.05
CASC4-211ENST00000561305 SLFNL1Q499Z3 407 aa8.49□□□□□ -1.05
CASC4-211ENST00000561305 RNF135Q8IUD6 432 aa8.49□□□□□ -1.05
CASC4-211ENST00000561305 COG6Q9Y2V7 657 aa8.49□□□□□ -1.05
CASC4-211ENST00000561305 HRH3Q9Y5N1 445 aa8.49□□□□□ -1.05
CASC4-211ENST00000561305 IL2RAP01589 272 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 SOX11P35716 441 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 POU4F2Q12837 409 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 WDR44Q5JSH3 913 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 SLC27A3Q5K4L6 730 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 XAGE2Q96GT9 111 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 ESYT1Q9BSJ8 1104 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 RAB6BQ9NRW1 208 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 DOLKQ9UPQ8 538 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 DYRK1BQ9Y463 629 aa8.48□□□□□ -1.05
CASC4-211ENST00000561305 USP4Q13107 963 aa8.47□□□□□ -1.05
CASC4-211ENST00000561305 NBPF10Q6P3W6 841 aaKnown RBP8.47□□□□□ -1.05
CASC4-211ENST00000561305 NBPF15Q8N660 670 aa8.47□□□□□ -1.05
CASC4-211ENST00000561305 CNKSR1Q969H4 720 aa8.47□□□□□ -1.05
CASC4-211ENST00000561305 GMCL1Q96IK5 515 aa8.47□□□□□ -1.05
CASC4-211ENST00000561305 CENPCQ03188 943 aa8.46□□□□□ -1.06
CASC4-211ENST00000561305 TRIM22Q8IYM9 498 aa8.45□□□□□ -1.06
CASC4-211ENST00000561305 SIRT1Q96EB6 747 aa8.45□□□□□ -1.06
CASC4-211ENST00000561305 WASLO00401 505 aaPredicted RBP8.44□□□□□ -1.06
CASC4-211ENST00000561305 SLURP2P0DP57 97 aa8.44□□□□□ -1.06
CASC4-211ENST00000561305 SEMA3FQ13275 785 aa8.44□□□□□ -1.06
CASC4-211ENST00000561305 MAP7D1Q3KQU3 841 aa8.44□□□□□ -1.06
CASC4-211ENST00000561305 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
CASC4-211ENST00000561305 ZNF837Q96EG3 531 aaPredicted RBP8.44□□□□□ -1.06
CASC4-211ENST00000561305 FHDC1Q9C0D6 1143 aaPredicted RBP8.44□□□□□ -1.06
CASC4-211ENST00000561305 GAS6Q14393 721 aa8.43□□□□□ -1.06
CASC4-211ENST00000561305 DBN1Q16643 649 aa8.43□□□□□ -1.06
CASC4-211ENST00000561305 OXLD1Q5BKU9 147 aa8.43□□□□□ -1.06
CASC4-211ENST00000561305 ESCO1Q5FWF5 840 aa8.43□□□□□ -1.06
CASC4-211ENST00000561305 H7C1W4 665 aa8.42□□□□□ -1.06
CASC4-211ENST00000561305 FLIIQ13045 1269 aa8.42□□□□□ -1.06
CASC4-211ENST00000561305 PLPP7Q8NBV4 271 aa8.42□□□□□ -1.06
CASC4-211ENST00000561305 POM121Q96HA1 1249 aa8.42□□□□□ -1.06
CASC4-211ENST00000561305 ZSCAN10Q96SZ4 725 aaPredicted RBP8.42□□□□□ -1.06
CASC4-211ENST00000561305 ETNK1Q9HBU6 452 aa8.42□□□□□ -1.06
CASC4-211ENST00000561305 TIMMDC1Q9NPL8 285 aa8.42□□□□□ -1.06
CASC4-211ENST00000561305 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
CASC4-211ENST00000561305 RIPOR1Q6ZS17 1223 aa8.41□□□□□ -1.06
CASC4-211ENST00000561305 GAS2L1Q99501 681 aaPredicted RBP8.41□□□□□ -1.06
CASC4-211ENST00000561305 ALG2Q9H553 416 aa8.41□□□□□ -1.06
CASC4-211ENST00000561305 STAU1O95793 577 aaKnown RBP8.4□□□□□ -1.06
CASC4-211ENST00000561305 F11P03951 625 aa8.4□□□□□ -1.06
CASC4-211ENST00000561305 SRSF11Q05519 484 aaKnown RBP8.4□□□□□ -1.06
CASC4-211ENST00000561305 SCNN1DP51172 638 aa8.39□□□□□ -1.07
CASC4-211ENST00000561305 WWC1Q8IX03 1113 aa8.39□□□□□ -1.07
CASC4-211ENST00000561305 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
CASC4-211ENST00000561305 PIK3CDO00329 1044 aa8.38□□□□□ -1.07
CASC4-211ENST00000561305 ADAMTS2O95450 1211 aa8.38□□□□□ -1.07
CASC4-211ENST00000561305 GDF10P55107 478 aa8.38□□□□□ -1.07
CASC4-211ENST00000561305 C4orf17Q53FE4 359 aa8.38□□□□□ -1.07
CASC4-211ENST00000561305 GNASQ5JWF2 1037 aa8.38□□□□□ -1.07
CASC4-211ENST00000561305 FOXR1Q6PIV2 292 aa8.38□□□□□ -1.07
CASC4-211ENST00000561305 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms