RNA–Protein interactions for RNA: ENST00000561298.1

PKNOX2-213, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-213ENST00000561298 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
PKNOX2-213ENST00000561298 DOT1LQ8TEK3 1739 aa12.81□□□□□ -0.36
PKNOX2-213ENST00000561298 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
PKNOX2-213ENST00000561298 IL2RBP14784 551 aa12.8□□□□□ -0.36
PKNOX2-213ENST00000561298 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
PKNOX2-213ENST00000561298 NHSQ6T4R5 1651 aa12.79□□□□□ -0.36
PKNOX2-213ENST00000561298 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
PKNOX2-213ENST00000561298 A0A0G2JS52 829 aa12.78□□□□□ -0.36
PKNOX2-213ENST00000561298 MYT1Q01538 1121 aa12.78□□□□□ -0.36
PKNOX2-213ENST00000561298 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
PKNOX2-213ENST00000561298 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
PKNOX2-213ENST00000561298 MRS2Q9HD23 443 aa12.78□□□□□ -0.36
PKNOX2-213ENST00000561298 BTAF1O14981 1849 aa12.77□□□□□ -0.37
PKNOX2-213ENST00000561298 DDB1Q16531 1140 aa12.77□□□□□ -0.37
PKNOX2-213ENST00000561298 SULT6B1Q6IMI4 303 aa12.77□□□□□ -0.37
PKNOX2-213ENST00000561298 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.37
PKNOX2-213ENST00000561298 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
PKNOX2-213ENST00000561298 CFAP53Q96M91 514 aa12.76□□□□□ -0.37
PKNOX2-213ENST00000561298 PLEKHG2Q9H7P9 1386 aa12.76□□□□□ -0.37
PKNOX2-213ENST00000561298 BCL9O00512 1426 aa12.76□□□□□ -0.37
PKNOX2-213ENST00000561298 EXOC5O00471 708 aa12.75□□□□□ -0.37
PKNOX2-213ENST00000561298 HMOX1P09601 288 aa12.75□□□□□ -0.37
PKNOX2-213ENST00000561298 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
PKNOX2-213ENST00000561298 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
PKNOX2-213ENST00000561298 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
PKNOX2-213ENST00000561298 CYP27B1O15528 508 aa12.74□□□□□ -0.37
PKNOX2-213ENST00000561298 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
PKNOX2-213ENST00000561298 SIPA1L3O60292 1781 aaPredicted RBP12.74□□□□□ -0.37
PKNOX2-213ENST00000561298 U2SURPO15042 1029 aaKnown RBP12.73□□□□□ -0.37
PKNOX2-213ENST00000561298 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
PKNOX2-213ENST00000561298 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
PKNOX2-213ENST00000561298 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
PKNOX2-213ENST00000561298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.37
PKNOX2-213ENST00000561298 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
PKNOX2-213ENST00000561298 FAM9BQ8IZU0 186 aa12.71□□□□□ -0.37
PKNOX2-213ENST00000561298 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
PKNOX2-213ENST00000561298 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
PKNOX2-213ENST00000561298 NUDCQ9Y266 331 aa12.71□□□□□ -0.37
PKNOX2-213ENST00000561298 LY75O60449 1722 aa12.71□□□□□ -0.38
PKNOX2-213ENST00000561298 RREB1Q92766 1687 aa12.7□□□□□ -0.38
PKNOX2-213ENST00000561298 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
PKNOX2-213ENST00000561298 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
PKNOX2-213ENST00000561298 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
PKNOX2-213ENST00000561298 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
PKNOX2-213ENST00000561298 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
PKNOX2-213ENST00000561298 KDM6AO15550 1401 aaPredicted RBP12.7□□□□□ -0.38
PKNOX2-213ENST00000561298 PHKG2P15735 406 aa12.69□□□□□ -0.38
PKNOX2-213ENST00000561298 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
PKNOX2-213ENST00000561298 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
PKNOX2-213ENST00000561298 FAM196AQ6ZSG2 479 aa12.69□□□□□ -0.38
PKNOX2-213ENST00000561298 PHACTR3Q96KR7 559 aa12.69□□□□□ -0.38
PKNOX2-213ENST00000561298 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
PKNOX2-213ENST00000561298 SOCS7O14512 581 aa12.68□□□□□ -0.38
PKNOX2-213ENST00000561298 FCHSD2O94868 740 aa12.68□□□□□ -0.38
PKNOX2-213ENST00000561298 HNRNPUQ00839 825 aaKnown RBP eCLIP12.68□□□□□ -0.38
PKNOX2-213ENST00000561298 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
PKNOX2-213ENST00000561298 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
PKNOX2-213ENST00000561298 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
PKNOX2-213ENST00000561298 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 MRC1P22897 1456 aa12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 PAPPAQ13219 1627 aa12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 KCNQ2O43526 872 aa12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 TRIM37O94972 964 aa12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 ZNF530Q6P9A1 599 aaPredicted RBP12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 GTF3C3Q9Y5Q9 886 aa12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
PKNOX2-213ENST00000561298 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
PKNOX2-213ENST00000561298 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
PKNOX2-213ENST00000561298 ADAMTS8Q9UP79 889 aa12.66□□□□□ -0.38
PKNOX2-213ENST00000561298 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
PKNOX2-213ENST00000561298 TUBGCP6Q96RT7 1819 aa12.63□□□□□ -0.39
PKNOX2-213ENST00000561298 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
PKNOX2-213ENST00000561298 AKAP4Q5JQC9 854 aa12.63□□□□□ -0.39
PKNOX2-213ENST00000561298 BCL11BQ9C0K0 894 aaPredicted RBP12.63□□□□□ -0.39
PKNOX2-213ENST00000561298 MAP3K5Q99683 1374 aa12.63□□□□□ -0.39
PKNOX2-213ENST00000561298 KDM3BQ7LBC6 1761 aa12.63□□□□□ -0.39
PKNOX2-213ENST00000561298 ZBED9Q6R2W3 1325 aa12.62□□□□□ -0.39
PKNOX2-213ENST00000561298 WDR43Q15061 677 aaKnown RBP eCLIP12.62□□□□□ -0.39
PKNOX2-213ENST00000561298 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
PKNOX2-213ENST00000561298 DEFB132Q7Z7B7 95 aa12.62□□□□□ -0.39
PKNOX2-213ENST00000561298 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
PKNOX2-213ENST00000561298 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
PKNOX2-213ENST00000561298 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
PKNOX2-213ENST00000561298 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 CCDC125Q86Z20 511 aa12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 MYH14Q7Z406 1995 aaKnown RBP12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 C5P01031 1676 aa12.61□□□□□ -0.39
PKNOX2-213ENST00000561298 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
PKNOX2-213ENST00000561298 TJP1Q07157 1748 aa12.6□□□□□ -0.39
PKNOX2-213ENST00000561298 CICQ96RK0 1608 aaPredicted RBP12.6□□□□□ -0.39
PKNOX2-213ENST00000561298 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
PKNOX2-213ENST00000561298 PIGBQ92521 554 aa12.6□□□□□ -0.39
PKNOX2-213ENST00000561298 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
PKNOX2-213ENST00000561298 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms