RNA–Protein interactions for RNA: ENST00000561208.5

MEIS2-222, Transcript of Meis homeobox 2, human

TSL 1 (best) BASIC

Gene MEIS2, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-222	ENST00000561208	PER1	O15534	1290 aa	Predicted RBP	12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	DNAJC2	Q99543	621 aa	Known RBP	12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	HCLS1	P14317	486 aa	Predicted RBP	12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	TNN	Q9UQP3	1299 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	NUTM1	Q86Y26	1132 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	JMY	Q8N9B5	988 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	CLIP2	Q9UDT6	1046 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	LIMCH1	Q9UPQ0	1083 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	CUL7	Q14999	1698 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	ERLIN1	O75477	346 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	CALCOCO1	Q9P1Z2	691 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	RPGRIP1L	Q68CZ1	1315 aa		12.55	□□□□□ -0.4
MEIS2-222	ENST00000561208	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	IL16	Q14005	1332 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	CBFA2T2	O43439	604 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	FILIP1L	Q4L180	1135 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	CAGE1	Q8TC20	777 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	TMX3	Q96JJ7	454 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	ZNF830	Q96NB3	372 aa	Predicted RBP	12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	IQGAP2	Q13576	1575 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	EIF3J	O75822	258 aa	Known RBP	12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	UBE2H	P62256	183 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	KIAA0586	Q9BVV6	1533 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	MARCH6	O60337	910 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	SMARCE1	Q969G3	411 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	ARHGEF11	O15085	1522 aa		12.54	□□□□□ -0.4
MEIS2-222	ENST00000561208	SFPQ	P23246	707 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
MEIS2-222	ENST00000561208	UGGT2	Q9NYU1	1516 aa		12.53	□□□□□ -0.4
MEIS2-222	ENST00000561208	ERICH2	A1L162	156 aa		12.53	□□□□□ -0.4
MEIS2-222	ENST00000561208	STX6	O43752	255 aa		12.53	□□□□□ -0.4
MEIS2-222	ENST00000561208	CKAP2L	Q8IYA6	745 aa		12.53	□□□□□ -0.4
MEIS2-222	ENST00000561208	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.53	□□□□□ -0.4
MEIS2-222	ENST00000561208	NLRP6	P59044	892 aa		12.53	□□□□□ -0.4
MEIS2-222	ENST00000561208	KRT32	Q14532	448 aa		12.53	□□□□□ -0.4
MEIS2-222	ENST00000561208	NEMF	O60524	1076 aa		12.52	□□□□□ -0.4
MEIS2-222	ENST00000561208	TESK2	Q96S53	571 aa		12.52	□□□□□ -0.4
MEIS2-222	ENST00000561208	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	PRPF40B	Q6NWY9	871 aa	Known RBP	12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	CEP89	Q96ST8	783 aa		12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	CCDC94	Q9BW85	323 aa	Predicted RBP	12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	DCTN1	Q14203	1278 aa		12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	RRS1	Q15050	365 aa	Known RBP	12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	AACS	Q86V21	672 aa		12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	KIF1BP	Q96EK5	621 aa		12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	TSPYL1	Q9H0U9	437 aa		12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	ASXL1	Q8IXJ9	1541 aa		12.52	□□□□□ -0.41
MEIS2-222	ENST00000561208	SMTNL1	A8MU46	457 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	GLRX3	O76003	335 aa	Known RBP	12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	ARHGAP45	Q92619	1136 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	DDX19A	Q9NUU7	478 aa	Known RBP	12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	ANO10	Q9NW15	660 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	ZNF692	Q9BU19	519 aa	Predicted RBP	12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	PEG3	Q9GZU2	1588 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	SDS	P20132	328 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	CDR1	P51861	262 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	TTC12	Q9H892	705 aa	Predicted RBP	12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	NOL7	Q9UMY1	257 aa	Known RBP	12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	ATP2B1	P20020	1258 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	PDE4C	Q08493	712 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	PPFIBP1	Q86W92	1011 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	ADGRF5	Q8IZF2	1346 aa		12.51	□□□□□ -0.41
MEIS2-222	ENST00000561208	RAB11FIP3	O75154	756 aa		12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	BRPF1	P55201	1214 aa	Predicted RBP	12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	NAP1L1	P55209	391 aa	Known RBP	12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	SKIDA1	Q1XH10	827 aa		12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	DDX11	Q96FC9	970 aa		12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	PAXBP1	Q9Y5B6	917 aa		12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	PRAG1	Q86YV5	1406 aa		12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	TRMT1	Q9NXH9	659 aa	Known RBP	12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	KDM4A	O75164	1064 aa		12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	GIMAP6	Q6P9H5	292 aa		12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	RDX	P35241	583 aa	Known RBP	12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	RBM25	P49756	843 aa	Known RBP	12.5	□□□□□ -0.41
MEIS2-222	ENST00000561208	ZNF165	P49910	485 aa		12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	SIL1	Q9H173	461 aa		12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	PATL2	C9JE40	543 aa	Known RBP	12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	GTPBP4	Q9BZE4	634 aa	Known RBP	12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	DACH1	Q9UI36	760 aa		12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	NSD2	O96028	1365 aa		12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	URI1	O94763	535 aa	Predicted RBP	12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	CFAP100	Q494V2	611 aa		12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	MCM10	Q7L590	875 aa		12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	USP48	Q86UV5	1035 aa		12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	LARP6	Q9BRS8	491 aa	Known RBP	12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	DDX54	Q8TDD1	881 aa	Known RBP	12.49	□□□□□ -0.41
MEIS2-222	ENST00000561208	POLR3A	O14802	1390 aa	Predicted RBP	12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	PIK3C2G	O75747	1445 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	XBP1	P17861	261 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	TERF1	P54274	439 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	NUTM2G	Q5VZR2	741 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	SLC52A1	Q9NWF4	448 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208		F6X3S4	739 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	CTAGE5	O15320	804 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	GJB2	P29033	226 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	ZBTB40	Q9NUA8	1239 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	MIS18A	Q9NYP9	233 aa		12.48	□□□□□ -0.41
MEIS2-222	ENST00000561208	CC2D2A	Q9P2K1	1620 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms