RNA–Protein interactions for RNA: ENST00000561009.5

IRF9-212, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-212ENST00000561009 USP47Q96K76 1375 aa16.38■□□□□ 0.21
IRF9-212ENST00000561009 LTN1O94822 1766 aa16.37■□□□□ 0.21
IRF9-212ENST00000561009 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
IRF9-212ENST00000561009 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
IRF9-212ENST00000561009 CHD4Q14839 1912 aa16.37■□□□□ 0.21
IRF9-212ENST00000561009 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
IRF9-212ENST00000561009 HOXC9P31274 260 aa16.35■□□□□ 0.21
IRF9-212ENST00000561009 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
IRF9-212ENST00000561009 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
IRF9-212ENST00000561009 FAM208AQ9UK61 1670 aaKnown RBP16.34■□□□□ 0.21
IRF9-212ENST00000561009 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
IRF9-212ENST00000561009 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.2
IRF9-212ENST00000561009 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.2
IRF9-212ENST00000561009 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
IRF9-212ENST00000561009 NSD2O96028 1365 aa16.31■□□□□ 0.2
IRF9-212ENST00000561009 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
IRF9-212ENST00000561009 MSL1Q68DK7 614 aa16.31■□□□□ 0.2
IRF9-212ENST00000561009 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
IRF9-212ENST00000561009 RTL1A6NKG5 1358 aa16.3■□□□□ 0.2
IRF9-212ENST00000561009 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
IRF9-212ENST00000561009 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
IRF9-212ENST00000561009 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
IRF9-212ENST00000561009 GPBP1L1Q9HC44 474 aaPredicted RBP16.29■□□□□ 0.2
IRF9-212ENST00000561009 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
IRF9-212ENST00000561009 MEGF6O75095 1541 aa16.29■□□□□ 0.2
IRF9-212ENST00000561009 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
IRF9-212ENST00000561009 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
IRF9-212ENST00000561009 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
IRF9-212ENST00000561009 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
IRF9-212ENST00000561009 AK7Q96M32 723 aa16.27■□□□□ 0.2
IRF9-212ENST00000561009 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
IRF9-212ENST00000561009 ATP10DQ9P241 1426 aa16.27■□□□□ 0.19
IRF9-212ENST00000561009 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
IRF9-212ENST00000561009 FBLN1P23142 703 aa16.26■□□□□ 0.19
IRF9-212ENST00000561009 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
IRF9-212ENST00000561009 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
IRF9-212ENST00000561009 USHBP1Q8N6Y0 703 aa16.26■□□□□ 0.19
IRF9-212ENST00000561009 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
IRF9-212ENST00000561009 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
IRF9-212ENST00000561009 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
IRF9-212ENST00000561009 LY75O60449 1722 aa16.25■□□□□ 0.19
IRF9-212ENST00000561009 COL24A1Q17RW2 1714 aa16.25■□□□□ 0.19
IRF9-212ENST00000561009 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
IRF9-212ENST00000561009 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
IRF9-212ENST00000561009 ZNF526Q8TF50 670 aaPredicted RBP16.23■□□□□ 0.19
IRF9-212ENST00000561009 GGNBP2Q9H3C7 697 aa16.23■□□□□ 0.19
IRF9-212ENST00000561009 TESK2Q96S53 571 aa16.22■□□□□ 0.19
IRF9-212ENST00000561009 PHF14O94880 888 aa16.21■□□□□ 0.19
IRF9-212ENST00000561009 TMF1P82094 1093 aa16.21■□□□□ 0.19
IRF9-212ENST00000561009 INSRP06213 1382 aa16.21■□□□□ 0.19
IRF9-212ENST00000561009 TUBGCP6Q96RT7 1819 aa16.21■□□□□ 0.19
IRF9-212ENST00000561009 FYB1O15117 783 aa16.2■□□□□ 0.18
IRF9-212ENST00000561009 HSPA6P17066 643 aa16.2■□□□□ 0.18
IRF9-212ENST00000561009 FLT4P35916 1363 aa16.2■□□□□ 0.18
IRF9-212ENST00000561009 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
IRF9-212ENST00000561009 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
IRF9-212ENST00000561009 KIF24Q5T7B8 1368 aa16.19■□□□□ 0.18
IRF9-212ENST00000561009 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
IRF9-212ENST00000561009 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
IRF9-212ENST00000561009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.18■□□□□ 0.18
IRF9-212ENST00000561009 SSFA2P28290 1259 aa16.18■□□□□ 0.18
IRF9-212ENST00000561009 SPG7Q9UQ90 795 aa16.18■□□□□ 0.18
IRF9-212ENST00000561009 C5P01031 1676 aa16.18■□□□□ 0.18
IRF9-212ENST00000561009 WWC3Q9ULE0 1092 aa16.17■□□□□ 0.18
IRF9-212ENST00000561009 ADCY9O60503 1353 aa16.16■□□□□ 0.18
IRF9-212ENST00000561009 CYP27B1O15528 508 aa16.16■□□□□ 0.18
IRF9-212ENST00000561009 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
IRF9-212ENST00000561009 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
IRF9-212ENST00000561009 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
IRF9-212ENST00000561009 GNPATO15228 680 aa16.14■□□□□ 0.17
IRF9-212ENST00000561009 SIK1P57059 783 aa16.14■□□□□ 0.17
IRF9-212ENST00000561009 PIGBQ92521 554 aa16.14■□□□□ 0.17
IRF9-212ENST00000561009 C4BP0C0L5 1744 aa16.14■□□□□ 0.17
IRF9-212ENST00000561009 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
IRF9-212ENST00000561009 CEP350Q5VT06 3117 aa16.12■□□□□ 0.17
IRF9-212ENST00000561009 ATP6V1AP38606 617 aa16.12■□□□□ 0.17
IRF9-212ENST00000561009 NKX1-1Q15270 411 aaPredicted RBP16.11■□□□□ 0.17
IRF9-212ENST00000561009 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
IRF9-212ENST00000561009 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
IRF9-212ENST00000561009 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
IRF9-212ENST00000561009 AMIGO3Q86WK7 504 aa16.1■□□□□ 0.17
IRF9-212ENST00000561009 IFNL2Q8IZJ0 200 aa16.1■□□□□ 0.17
IRF9-212ENST00000561009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.178e-7■□□□□ 11
IRF9-212ENST00000561009 MMP10P09238 476 aa16.09■□□□□ 0.17
IRF9-212ENST00000561009 APLP1P51693 650 aa16.09■□□□□ 0.17
IRF9-212ENST00000561009 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
IRF9-212ENST00000561009 KIF3CO14782 793 aa16.08■□□□□ 0.16
IRF9-212ENST00000561009 TGFB2P61812 414 aa16.08■□□□□ 0.16
IRF9-212ENST00000561009 TRAPPC3LQ5T215 181 aa16.08■□□□□ 0.16
IRF9-212ENST00000561009 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
IRF9-212ENST00000561009 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
IRF9-212ENST00000561009 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
IRF9-212ENST00000561009 WASHC2AQ641Q2 1341 aa16.06■□□□□ 0.16
IRF9-212ENST00000561009 TOMM70O94826 608 aa16.06■□□□□ 0.16
IRF9-212ENST00000561009 PHKG2P15735 406 aa16.06■□□□□ 0.16
IRF9-212ENST00000561009 ITPK1Q13572 414 aa16.06■□□□□ 0.16
IRF9-212ENST00000561009 ARHGAP27Q6ZUM4 889 aa16.06■□□□□ 0.16
IRF9-212ENST00000561009 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
IRF9-212ENST00000561009 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
IRF9-212ENST00000561009 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms