RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 NCAPD2Q15021 1401 aa9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
CTDSPL2-210ENST00000560834 ANP32CO43423 234 aa9.52□□□□□ -0.89
CTDSPL2-210ENST00000560834 GLI3P10071 1580 aa9.52□□□□□ -0.89
CTDSPL2-210ENST00000560834 SCUBE2Q9NQ36 999 aa9.52□□□□□ -0.89
CTDSPL2-210ENST00000560834 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 ZBTB7CA1YPR0 619 aa9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 FAM83GA6ND36 823 aa9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 POTEJP0CG39 1038 aa9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 MTHFSP49914 203 aa9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 IP6K1Q92551 441 aa9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 AXIN2Q9Y2T1 843 aa9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 ERBB3P21860 1342 aa9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
CTDSPL2-210ENST00000560834 LRRC37A3O60309 1634 aa9.5□□□□□ -0.89
CTDSPL2-210ENST00000560834 AMPHP49418 695 aa9.5□□□□□ -0.89
CTDSPL2-210ENST00000560834 HSP90AB2PQ58FF8 381 aa9.5□□□□□ -0.89
CTDSPL2-210ENST00000560834 C8orf37Q96NL8 207 aa9.5□□□□□ -0.89
CTDSPL2-210ENST00000560834 METRNQ9UJH8 293 aa9.5□□□□□ -0.89
CTDSPL2-210ENST00000560834 THSD7AQ9UPZ6 1657 aa9.5□□□□□ -0.89
CTDSPL2-210ENST00000560834 PKD1L3Q7Z443 1732 aa9.5□□□□□ -0.89
CTDSPL2-210ENST00000560834 ATRNO75882 1429 aa9.49□□□□□ -0.89
CTDSPL2-210ENST00000560834 PELP1Q8IZL8 1130 aaKnown RBP9.49□□□□□ -0.89
CTDSPL2-210ENST00000560834 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL2-210ENST00000560834 BTG4Q9NY30 223 aa9.49□□□□□ -0.89
CTDSPL2-210ENST00000560834 AFF2P51816 1311 aa9.49□□□□□ -0.89
CTDSPL2-210ENST00000560834 CRB1P82279 1406 aa9.48□□□□□ -0.89
CTDSPL2-210ENST00000560834 PPM1GO15355 546 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL2-210ENST00000560834 EIF4A2Q14240 407 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-210ENST00000560834 CCDC184Q52MB2 194 aa9.48□□□□□ -0.89
CTDSPL2-210ENST00000560834 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-210ENST00000560834 ANKRD24Q8TF21 1146 aa9.48□□□□□ -0.89
CTDSPL2-210ENST00000560834 WDR17Q8IZU2 1322 aa9.48□□□□□ -0.89
CTDSPL2-210ENST00000560834 DISP2A7MBM2 1401 aa9.48□□□□□ -0.89
CTDSPL2-210ENST00000560834 IL13P35225 146 aa9.47□□□□□ -0.89
CTDSPL2-210ENST00000560834 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-210ENST00000560834 IGSF1Q8N6C5 1336 aa9.47□□□□□ -0.89
CTDSPL2-210ENST00000560834 MEGF6O75095 1541 aa9.46□□□□□ -0.89
CTDSPL2-210ENST00000560834 C7P10643 843 aa9.46□□□□□ -0.9
CTDSPL2-210ENST00000560834 LARP1Q6PKG0 1096 aaKnown RBP9.46□□□□□ -0.9
CTDSPL2-210ENST00000560834 UNC5CLQ8IV45 518 aa9.46□□□□□ -0.9
CTDSPL2-210ENST00000560834 BBXQ8WY36 941 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL2-210ENST00000560834 NGLY1Q96IV0 654 aa9.46□□□□□ -0.9
CTDSPL2-210ENST00000560834 KDRP35968 1356 aa9.46□□□□□ -0.9
CTDSPL2-210ENST00000560834 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
CTDSPL2-210ENST00000560834 LTV1Q96GA3 475 aaPredicted RBP9.45□□□□□ -0.9
CTDSPL2-210ENST00000560834 CFAP53Q96M91 514 aa9.45□□□□□ -0.9
CTDSPL2-210ENST00000560834 STRN4Q9NRL3 753 aa9.45□□□□□ -0.9
CTDSPL2-210ENST00000560834 USP21Q9UK80 565 aa9.45□□□□□ -0.9
CTDSPL2-210ENST00000560834 CCER2I3L3R5 266 aa9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 RGL2O15211 777 aa9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 DIAPH1O60610 1272 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 VPS72Q15906 364 aa9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 EYA1Q99502 592 aa9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 SPATA31A1Q5TZJ5 1347 aa9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 SPATA31A5Q5VU36 1347 aa9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 SPATA31A7Q8IWB4 1347 aa9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 BRWD3Q6RI45 1802 aa9.44□□□□□ -0.9
CTDSPL2-210ENST00000560834 VIRMAQ69YN4 1812 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 OVOS2A0A0G2JMS6 1433 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 TNS2Q63HR2 1409 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 PLEKHG2Q9H7P9 1386 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 NBPF6Q5VWK0 638 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 USHBP1Q8N6Y0 703 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 NBPF4Q96M43 638 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 MRS2Q9HD23 443 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 RGS17Q9UGC6 210 aaPredicted RBP9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 DLG5Q8TDM6 1919 aa9.43□□□□□ -0.9
CTDSPL2-210ENST00000560834 ADAMTS7Q9UKP4 1686 aa9.42□□□□□ -0.9
CTDSPL2-210ENST00000560834 CSB-PGBD3P0DP91 1061 aa9.42□□□□□ -0.9
CTDSPL2-210ENST00000560834 TOM1L2Q6ZVM7 507 aa9.42□□□□□ -0.9
CTDSPL2-210ENST00000560834 AEBP1Q8IUX7 1158 aa9.42□□□□□ -0.9
CTDSPL2-210ENST00000560834 CARD10Q9BWT7 1032 aa9.42□□□□□ -0.9
CTDSPL2-210ENST00000560834 TOGARAM1Q9Y4F4 1720 aa9.42□□□□□ -0.9
CTDSPL2-210ENST00000560834 RGS12O14924 1447 aa9.41□□□□□ -0.9
CTDSPL2-210ENST00000560834 EVA1CP58658 441 aa9.41□□□□□ -0.9
CTDSPL2-210ENST00000560834 RSPH6AQ9H0K4 717 aa9.41□□□□□ -0.9
CTDSPL2-210ENST00000560834 NLRP2Q9NX02 1062 aa9.41□□□□□ -0.9
CTDSPL2-210ENST00000560834 TRPC5Q9UL62 973 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-210ENST00000560834 DOT1LQ8TEK3 1739 aa9.4□□□□□ -0.9
CTDSPL2-210ENST00000560834 U2SURPO15042 1029 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-210ENST00000560834 ZNF772Q68DY9 489 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-210ENST00000560834 VSIG10Q8N0Z9 540 aa9.4□□□□□ -0.9
CTDSPL2-210ENST00000560834 PNISRQ8TF01 805 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-210ENST00000560834 HMOX1P09601 288 aa9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 SULT6B1Q6IMI4 303 aa9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 TCP11L2Q8N4U5 519 aa9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 GJD4Q96KN9 370 aaPredicted RBP9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 NUDCQ9Y266 331 aa9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 THRAP3Q9Y2W1 955 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-210ENST00000560834 SIPA1L3O60292 1781 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-210ENST00000560834 SCN11AQ9UI33 1791 aa9.38□□□□□ -0.91
CTDSPL2-210ENST00000560834 U2AF1L5P0DN76 240 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-210ENST00000560834 U2AF1Q01081 240 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTDSPL2-210ENST00000560834 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms