RNA–Protein interactions for RNA: ENST00000560828.5

CPNE6-217, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-217ENST00000560828 EMILIN1Q9Y6C2 1016 aa23.28■■□□□ 1.32
CPNE6-217ENST00000560828 SLC15A2Q16348 729 aa23.27■■□□□ 1.32
CPNE6-217ENST00000560828 TATP17735 454 aaPredicted RBP23.25■■□□□ 1.31
CPNE6-217ENST00000560828 RGPD2P0DJD1 1756 aa23.24■■□□□ 1.31
CPNE6-217ENST00000560828 BTAF1O14981 1849 aa23.24■■□□□ 1.31
CPNE6-217ENST00000560828 WASHC2AQ641Q2 1341 aa23.24■■□□□ 1.31
CPNE6-217ENST00000560828 ANKRD26Q9UPS8 1709 aa23.23■■□□□ 1.31
CPNE6-217ENST00000560828 PPM1GO15355 546 aaPredicted RBP23.23■■□□□ 1.31
CPNE6-217ENST00000560828 PAPPAQ13219 1627 aa23.22■■□□□ 1.31
CPNE6-217ENST00000560828 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
CPNE6-217ENST00000560828 PRIM1P49642 420 aaKnown RBP23.22■■□□□ 1.31
CPNE6-217ENST00000560828 SYTL4Q96C24 671 aaPredicted RBP23.22■■□□□ 1.31
CPNE6-217ENST00000560828 SLC27A3Q5K4L6 730 aa23.21■■□□□ 1.31
CPNE6-217ENST00000560828 PDGFDQ9GZP0 370 aaPredicted RBP23.21■■□□□ 1.31
CPNE6-217ENST00000560828 PANK3Q9H999 370 aa23.21■■□□□ 1.31
CPNE6-217ENST00000560828 PPP1R1BQ9UD71 204 aaPredicted RBP23.21■■□□□ 1.31
CPNE6-217ENST00000560828 PCDH11XQ9BZA7 1347 aa23.21■■□□□ 1.31
CPNE6-217ENST00000560828 PCDH11YQ9BZA8 1340 aa23.21■■□□□ 1.31
CPNE6-217ENST00000560828 NSD2O96028 1365 aa23.21■■□□□ 1.31
CPNE6-217ENST00000560828 NCAPD2Q15021 1401 aa23.21■■□□□ 1.31
CPNE6-217ENST00000560828 POLKQ9UBT6 870 aa23.2■■□□□ 1.3
CPNE6-217ENST00000560828 LRRC4BQ9NT99 713 aa23.19■■□□□ 1.3
CPNE6-217ENST00000560828 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
CPNE6-217ENST00000560828 ZBTB7AO95365 584 aa23.17■■□□□ 1.3
CPNE6-217ENST00000560828 TNNT2P45379 298 aaPredicted RBP23.15■■□□□ 1.3
CPNE6-217ENST00000560828 ZNF827Q17R98 1081 aa23.15■■□□□ 1.3
CPNE6-217ENST00000560828 MTFR1LQ9H019 292 aa23.15■■□□□ 1.3
CPNE6-217ENST00000560828 EYA1Q99502 592 aa23.14■■□□□ 1.29
CPNE6-217ENST00000560828 CYP27B1O15528 508 aa23.13■■□□□ 1.29
CPNE6-217ENST00000560828 PTGER2P43116 358 aa23.13■■□□□ 1.29
CPNE6-217ENST00000560828 AKT1S1Q96B36 256 aa23.13■■□□□ 1.29
CPNE6-217ENST00000560828 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
CPNE6-217ENST00000560828 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
CPNE6-217ENST00000560828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
CPNE6-217ENST00000560828 ATF5Q9Y2D1 282 aaPredicted RBP23.11■■□□□ 1.29
CPNE6-217ENST00000560828 PLEKHG2Q9H7P9 1386 aa23.11■■□□□ 1.29
CPNE6-217ENST00000560828 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
CPNE6-217ENST00000560828 CCNL1Q9UK58 526 aaPredicted RBP23.1■■□□□ 1.29
CPNE6-217ENST00000560828 KAT6BQ8WYB5 2073 aa23.09■■□□□ 1.29
CPNE6-217ENST00000560828 YY1P25490 414 aa23.09■■□□□ 1.29
CPNE6-217ENST00000560828 KNSTRNQ9Y448 316 aa23.09■■□□□ 1.29
CPNE6-217ENST00000560828 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.29
CPNE6-217ENST00000560828 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
CPNE6-217ENST00000560828 KCNQ4P56696 695 aa23.08■■□□□ 1.29
CPNE6-217ENST00000560828 NKX1-1Q15270 411 aaPredicted RBP23.08■■□□□ 1.29
CPNE6-217ENST00000560828 MORC1Q86VD1 984 aa23.08■■□□□ 1.29
CPNE6-217ENST00000560828 SGIP1Q9BQI5 828 aa23.08■■□□□ 1.29
CPNE6-217ENST00000560828 LY75O60449 1722 aa23.08■■□□□ 1.28
CPNE6-217ENST00000560828 IGSF1Q8N6C5 1336 aa23.07■■□□□ 1.28
CPNE6-217ENST00000560828 CHD4Q14839 1912 aa23.06■■□□□ 1.28
CPNE6-217ENST00000560828 MPRIPQ6WCQ1 1025 aa23.06■■□□□ 1.28
CPNE6-217ENST00000560828 TFCP2L1Q9NZI6 479 aa23.06■■□□□ 1.28
CPNE6-217ENST00000560828 PNPLA7Q6ZV29 1317 aa23.06■■□□□ 1.28
CPNE6-217ENST00000560828 HMGB2P26583 209 aaKnown RBP23.05■■□□□ 1.28
CPNE6-217ENST00000560828 SLC16A10Q8TF71 515 aa23.05■■□□□ 1.28
CPNE6-217ENST00000560828 PALLDQ8WX93 1383 aa23.04■■□□□ 1.28
CPNE6-217ENST00000560828 QSER1Q2KHR3 1735 aa23.02■■□□□ 1.28
CPNE6-217ENST00000560828 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
CPNE6-217ENST00000560828 DCAF8L1A6NGE4 600 aa23.02■■□□□ 1.28
CPNE6-217ENST00000560828 PHKG2P15735 406 aa23.02■■□□□ 1.28
CPNE6-217ENST00000560828 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
CPNE6-217ENST00000560828 IFNL2Q8IZJ0 200 aa23.02■■□□□ 1.28
CPNE6-217ENST00000560828 SMARCC1Q92922 1105 aaPredicted RBP23.02■■□□□ 1.28
CPNE6-217ENST00000560828 ARXQ96QS3 562 aa23.01■■□□□ 1.27
CPNE6-217ENST00000560828 PIGBQ92521 554 aa23■■□□□ 1.27
CPNE6-217ENST00000560828 FHDC1Q9C0D6 1143 aaPredicted RBP23■■□□□ 1.27
CPNE6-217ENST00000560828 SYT17Q9BSW7 474 aa22.98■■□□□ 1.27
CPNE6-217ENST00000560828 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
CPNE6-217ENST00000560828 TUBGCP6Q96RT7 1819 aa22.98■■□□□ 1.27
CPNE6-217ENST00000560828 MAP3K5Q99683 1374 aa22.98■■□□□ 1.27
CPNE6-217ENST00000560828 COL24A1Q17RW2 1714 aa22.96■■□□□ 1.27
CPNE6-217ENST00000560828 POLD1P28340 1107 aa22.96■■□□□ 1.27
CPNE6-217ENST00000560828 PER1O15534 1290 aaPredicted RBP22.95■■□□□ 1.26
CPNE6-217ENST00000560828 C5P01031 1676 aa22.95■■□□□ 1.26
CPNE6-217ENST00000560828 AMOTQ4VCS5 1084 aa22.95■■□□□ 1.26
CPNE6-217ENST00000560828 PLEKHO1Q53GL0 409 aaPredicted RBP22.95■■□□□ 1.26
CPNE6-217ENST00000560828 HSP90AB1P08238 724 aaKnown RBP22.94■■□□□ 1.26
CPNE6-217ENST00000560828 KDRP35968 1356 aa22.93■■□□□ 1.26
CPNE6-217ENST00000560828 IL13P35225 146 aa22.93■■□□□ 1.26
CPNE6-217ENST00000560828 COL23A1Q86Y22 540 aaPredicted RBP22.93■■□□□ 1.26
CPNE6-217ENST00000560828 FLAD1Q8NFF5 587 aa22.93■■□□□ 1.26
CPNE6-217ENST00000560828 ITGB4P16144 1822 aa22.93■■□□□ 1.26
CPNE6-217ENST00000560828 AEBP1Q8IUX7 1158 aa22.92■■□□□ 1.26
CPNE6-217ENST00000560828 DCAF5Q96JK2 942 aa22.92■■□□□ 1.26
CPNE6-217ENST00000560828 LOC102724428A0A0B4J2F2 783 aa22.91■■□□□ 1.26
CPNE6-217ENST00000560828 ERVV-2B6SEH9 535 aa22.91■■□□□ 1.26
CPNE6-217ENST00000560828 MSH5O43196 834 aa22.91■■□□□ 1.26
CPNE6-217ENST00000560828 SIK1P57059 783 aa22.91■■□□□ 1.26
CPNE6-217ENST00000560828 UTRNP46939 3433 aa22.91■■□□□ 1.26
CPNE6-217ENST00000560828 SULT6B1Q6IMI4 303 aa22.9■■□□□ 1.26
CPNE6-217ENST00000560828 ZNF530Q6P9A1 599 aaPredicted RBP22.9■■□□□ 1.26
CPNE6-217ENST00000560828 AK7Q96M32 723 aa22.9■■□□□ 1.26
CPNE6-217ENST00000560828 ASAP1Q9ULH1 1129 aa22.9■■□□□ 1.26
CPNE6-217ENST00000560828 NPC1L1Q9UHC9 1359 aa22.89■■□□□ 1.26
CPNE6-217ENST00000560828 C4BP0C0L5 1744 aa22.89■■□□□ 1.26
CPNE6-217ENST00000560828 MTHFSP49914 203 aa22.89■■□□□ 1.25
CPNE6-217ENST00000560828 CC2D1BQ5T0F9 858 aaKnown RBP22.88■■□□□ 1.25
CPNE6-217ENST00000560828 ATG3Q9NT62 314 aa22.88■■□□□ 1.25
CPNE6-217ENST00000560828 C1orf141Q5JVX7 400 aa22.87■■□□□ 1.25
CPNE6-217ENST00000560828 KDM6AO15550 1401 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms