RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
NEO1-211ENST00000560808 CARD14Q9BXL6 1004 aa13.32□□□□□ -0.28
NEO1-211ENST00000560808 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
NEO1-211ENST00000560808 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
NEO1-211ENST00000560808 CASZ1Q86V15 1759 aa13.31□□□□□ -0.28
NEO1-211ENST00000560808 MSH5O43196 834 aa13.31□□□□□ -0.28
NEO1-211ENST00000560808 GPR162Q16538 588 aa13.31□□□□□ -0.28
NEO1-211ENST00000560808 PNPLA7Q6ZV29 1317 aa13.31□□□□□ -0.28
NEO1-211ENST00000560808 WNK3Q9BYP7 1800 aa13.3□□□□□ -0.28
NEO1-211ENST00000560808 ZNF784Q8NCA9 323 aaPredicted RBP13.3□□□□□ -0.28
NEO1-211ENST00000560808 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
NEO1-211ENST00000560808 USP54Q70EL1 1684 aa13.29□□□□□ -0.28
NEO1-211ENST00000560808 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
NEO1-211ENST00000560808 RTL1A6NKG5 1358 aa13.29□□□□□ -0.28
NEO1-211ENST00000560808 MPRIPQ6WCQ1 1025 aa13.28□□□□□ -0.28
NEO1-211ENST00000560808 COL23A1Q86Y22 540 aaPredicted RBP13.28□□□□□ -0.28
NEO1-211ENST00000560808 NSD2O96028 1365 aa13.28□□□□□ -0.28
NEO1-211ENST00000560808 INSRP06213 1382 aa13.28□□□□□ -0.28
NEO1-211ENST00000560808 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
NEO1-211ENST00000560808 MEGF6O75095 1541 aa13.28□□□□□ -0.28
NEO1-211ENST00000560808 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
NEO1-211ENST00000560808 EMILIN1Q9Y6C2 1016 aa13.27□□□□□ -0.29
NEO1-211ENST00000560808 MAP3K5Q99683 1374 aa13.27□□□□□ -0.29
NEO1-211ENST00000560808 LTN1O94822 1766 aa13.27□□□□□ -0.29
NEO1-211ENST00000560808 CYP27B1O15528 508 aa13.26□□□□□ -0.29
NEO1-211ENST00000560808 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
NEO1-211ENST00000560808 MYOM1P52179 1685 aa13.26□□□□□ -0.29
NEO1-211ENST00000560808 PCDH11XQ9BZA7 1347 aa13.26□□□□□ -0.29
NEO1-211ENST00000560808 PCDH11YQ9BZA8 1340 aa13.26□□□□□ -0.29
NEO1-211ENST00000560808 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
NEO1-211ENST00000560808 FLT4P35916 1363 aa13.25□□□□□ -0.29
NEO1-211ENST00000560808 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
NEO1-211ENST00000560808 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
NEO1-211ENST00000560808 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
NEO1-211ENST00000560808 MSL1Q68DK7 614 aa13.24□□□□□ -0.29
NEO1-211ENST00000560808 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
NEO1-211ENST00000560808 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
NEO1-211ENST00000560808 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
NEO1-211ENST00000560808 BTAF1O14981 1849 aa13.24□□□□□ -0.29
NEO1-211ENST00000560808 FLAD1Q8NFF5 587 aa13.23□□□□□ -0.29
NEO1-211ENST00000560808 PIGBQ92521 554 aa13.23□□□□□ -0.29
NEO1-211ENST00000560808 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
NEO1-211ENST00000560808 PAPPAQ13219 1627 aa13.23□□□□□ -0.29
NEO1-211ENST00000560808 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
NEO1-211ENST00000560808 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
NEO1-211ENST00000560808 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
NEO1-211ENST00000560808 EYA1Q99502 592 aa13.22□□□□□ -0.29
NEO1-211ENST00000560808 PALLDQ8WX93 1383 aa13.21□□□□□ -0.29
NEO1-211ENST00000560808 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
NEO1-211ENST00000560808 POLKQ9UBT6 870 aa13.21□□□□□ -0.29
NEO1-211ENST00000560808 UTRNP46939 3433 aa13.21□□□□□ -0.3
NEO1-211ENST00000560808 GRIN3BO60391 1043 aa13.2□□□□□ -0.3
NEO1-211ENST00000560808 AK7Q96M32 723 aa13.2□□□□□ -0.3
NEO1-211ENST00000560808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.3
NEO1-211ENST00000560808 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
NEO1-211ENST00000560808 SMIM5Q71RC9 77 aa13.19□□□□□ -0.3
NEO1-211ENST00000560808 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
NEO1-211ENST00000560808 PHF14O94880 888 aa13.18□□□□□ -0.3
NEO1-211ENST00000560808 C1QTNF8P60827 252 aa13.18□□□□□ -0.3
NEO1-211ENST00000560808 IFNL2Q8IZJ0 200 aa13.18□□□□□ -0.3
NEO1-211ENST00000560808 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
NEO1-211ENST00000560808 ASAP1Q9ULH1 1129 aa13.18□□□□□ -0.3
NEO1-211ENST00000560808 CD2APQ9Y5K6 639 aa13.18□□□□□ -0.3
NEO1-211ENST00000560808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
NEO1-211ENST00000560808 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
NEO1-211ENST00000560808 ADRA2BP18089 450 aa13.17□□□□□ -0.3
NEO1-211ENST00000560808 SIK1P57059 783 aa13.17□□□□□ -0.3
NEO1-211ENST00000560808 AMIGO3Q86WK7 504 aa13.17□□□□□ -0.3
NEO1-211ENST00000560808 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
NEO1-211ENST00000560808 PHKG2P15735 406 aa13.16□□□□□ -0.3
NEO1-211ENST00000560808 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
NEO1-211ENST00000560808 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
NEO1-211ENST00000560808 PANK3Q9H999 370 aa13.16□□□□□ -0.3
NEO1-211ENST00000560808 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEO1-211ENST00000560808 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
NEO1-211ENST00000560808 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
NEO1-211ENST00000560808 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
NEO1-211ENST00000560808 HSPA5P11021 654 aaKnown RBP13.14□□□□□ -0.31
NEO1-211ENST00000560808 ITPK1Q13572 414 aa13.14□□□□□ -0.31
NEO1-211ENST00000560808 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
NEO1-211ENST00000560808 GNPATO15228 680 aa13.13□□□□□ -0.31
NEO1-211ENST00000560808 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
NEO1-211ENST00000560808 SSFA2P28290 1259 aa13.13□□□□□ -0.31
NEO1-211ENST00000560808 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
NEO1-211ENST00000560808 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
NEO1-211ENST00000560808 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
NEO1-211ENST00000560808 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
NEO1-211ENST00000560808 HSP90AB1P08238 724 aaKnown RBP13.11□□□□□ -0.31
NEO1-211ENST00000560808 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
NEO1-211ENST00000560808 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
NEO1-211ENST00000560808 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
NEO1-211ENST00000560808 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
NEO1-211ENST00000560808 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
NEO1-211ENST00000560808 LY75O60449 1722 aa13.1□□□□□ -0.31
NEO1-211ENST00000560808 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
NEO1-211ENST00000560808 CABP4P57796 275 aa13.1□□□□□ -0.31
NEO1-211ENST00000560808 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
NEO1-211ENST00000560808 MTHFSP49914 203 aa13.09□□□□□ -0.31
NEO1-211ENST00000560808 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
NEO1-211ENST00000560808 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms