RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 FLT4P35916 1363 aa16.67■□□□□ 0.26
ALDH1A3-206ENST00000560555 CSB-PGBD3P0DP91 1061 aa16.67■□□□□ 0.26
ALDH1A3-206ENST00000560555 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
ALDH1A3-206ENST00000560555 PROM2Q8N271 834 aa16.67■□□□□ 0.26
ALDH1A3-206ENST00000560555 BCL11BQ9C0K0 894 aaPredicted RBP16.67■□□□□ 0.26
ALDH1A3-206ENST00000560555 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
ALDH1A3-206ENST00000560555 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
ALDH1A3-206ENST00000560555 GIGYF1O75420 1035 aaPredicted RBP16.66■□□□□ 0.26
ALDH1A3-206ENST00000560555 CC2D1BQ5T0F9 858 aaKnown RBP16.66■□□□□ 0.26
ALDH1A3-206ENST00000560555 MARCH10Q8NA82 808 aaPredicted RBP16.65■□□□□ 0.26
ALDH1A3-206ENST00000560555 NCAPD2Q15021 1401 aa16.64■□□□□ 0.25
ALDH1A3-206ENST00000560555 PTF1AQ7RTS3 328 aa16.64■□□□□ 0.25
ALDH1A3-206ENST00000560555 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
ALDH1A3-206ENST00000560555 PPM1GO15355 546 aaPredicted RBP16.63■□□□□ 0.25
ALDH1A3-206ENST00000560555 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
ALDH1A3-206ENST00000560555 USHBP1Q8N6Y0 703 aa16.63■□□□□ 0.25
ALDH1A3-206ENST00000560555 EYA1Q99502 592 aa16.63■□□□□ 0.25
ALDH1A3-206ENST00000560555 SGIP1Q9BQI5 828 aa16.63■□□□□ 0.25
ALDH1A3-206ENST00000560555 CASZ1Q86V15 1759 aa16.63■□□□□ 0.25
ALDH1A3-206ENST00000560555 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
ALDH1A3-206ENST00000560555 MTFR1LQ9H019 292 aa16.62■□□□□ 0.25
ALDH1A3-206ENST00000560555 UTRNP46939 3433 aa16.62■□□□□ 0.25
ALDH1A3-206ENST00000560555 OVOS2A0A0G2JMS6 1433 aa16.62■□□□□ 0.25
ALDH1A3-206ENST00000560555 MEGF6O75095 1541 aa16.61■□□□□ 0.25
ALDH1A3-206ENST00000560555 IL2RBP14784 551 aa16.61■□□□□ 0.25
ALDH1A3-206ENST00000560555 MTHFSP49914 203 aa16.61■□□□□ 0.25
ALDH1A3-206ENST00000560555 STK32BQ9NY57 414 aa16.61■□□□□ 0.25
ALDH1A3-206ENST00000560555 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
ALDH1A3-206ENST00000560555 SLC15A2Q16348 729 aa16.6■□□□□ 0.25
ALDH1A3-206ENST00000560555 DDB1Q16531 1140 aa16.6■□□□□ 0.25
ALDH1A3-206ENST00000560555 CDCA7Q9BWT1 371 aaPredicted RBP16.6■□□□□ 0.25
ALDH1A3-206ENST00000560555 IL13P35225 146 aa16.59■□□□□ 0.25
ALDH1A3-206ENST00000560555 GPR162Q16538 588 aa16.59■□□□□ 0.25
ALDH1A3-206ENST00000560555 ARXQ96QS3 562 aa16.59■□□□□ 0.25
ALDH1A3-206ENST00000560555 EXOC5O00471 708 aa16.58■□□□□ 0.24
ALDH1A3-206ENST00000560555 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
ALDH1A3-206ENST00000560555 TXNRD1Q16881 649 aa16.58■□□□□ 0.24
ALDH1A3-206ENST00000560555 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
ALDH1A3-206ENST00000560555 BCL9O00512 1426 aa16.57■□□□□ 0.24
ALDH1A3-206ENST00000560555 TNS2Q63HR2 1409 aa16.56■□□□□ 0.24
ALDH1A3-206ENST00000560555 IGSF1Q8N6C5 1336 aa16.56■□□□□ 0.24
ALDH1A3-206ENST00000560555 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
ALDH1A3-206ENST00000560555 PPP2R1AP30153 589 aa16.55■□□□□ 0.24
ALDH1A3-206ENST00000560555 RGPD3A6NKT7 1758 aaPredicted RBP16.54■□□□□ 0.24
ALDH1A3-206ENST00000560555 RGPD4Q7Z3J3 1758 aa16.54■□□□□ 0.24
ALDH1A3-206ENST00000560555 AEBP1Q8IUX7 1158 aa16.53■□□□□ 0.24
ALDH1A3-206ENST00000560555 CYP27B1O15528 508 aa16.52■□□□□ 0.24
ALDH1A3-206ENST00000560555 ZCRB1Q8TBF4 217 aaKnown RBP16.52■□□□□ 0.24
ALDH1A3-206ENST00000560555 PKD1L3Q7Z443 1732 aa16.52■□□□□ 0.24
ALDH1A3-206ENST00000560555 CHD4Q14839 1912 aa16.52■□□□□ 0.23
ALDH1A3-206ENST00000560555 KDRP35968 1356 aa16.51■□□□□ 0.23
ALDH1A3-206ENST00000560555 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
ALDH1A3-206ENST00000560555 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
ALDH1A3-206ENST00000560555 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
ALDH1A3-206ENST00000560555 CEP350Q5VT06 3117 aa16.5■□□□□ 0.23
ALDH1A3-206ENST00000560555 TATP17735 454 aaPredicted RBP16.49■□□□□ 0.23
ALDH1A3-206ENST00000560555 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
ALDH1A3-206ENST00000560555 RAPGEF4Q8WZA2 1011 aa16.48■□□□□ 0.23
ALDH1A3-206ENST00000560555 SULT6B1Q6IMI4 303 aa16.47■□□□□ 0.23
ALDH1A3-206ENST00000560555 ACSBG1Q96GR2 724 aa16.47■□□□□ 0.23
ALDH1A3-206ENST00000560555 NHSQ6T4R5 1651 aa16.46■□□□□ 0.23
ALDH1A3-206ENST00000560555 TOGARAM1Q9Y4F4 1720 aa16.46■□□□□ 0.23
ALDH1A3-206ENST00000560555 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
ALDH1A3-206ENST00000560555 NKX1-1Q15270 411 aaPredicted RBP16.46■□□□□ 0.23
ALDH1A3-206ENST00000560555 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
ALDH1A3-206ENST00000560555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.46■□□□□ 0.23
ALDH1A3-206ENST00000560555 HMOX1P09601 288 aa16.44■□□□□ 0.22
ALDH1A3-206ENST00000560555 HSPA6P17066 643 aa16.44■□□□□ 0.22
ALDH1A3-206ENST00000560555 BTAF1O14981 1849 aa16.44■□□□□ 0.22
ALDH1A3-206ENST00000560555 ITGB4P16144 1822 aa16.44■□□□□ 0.22
ALDH1A3-206ENST00000560555 DOT1LQ8TEK3 1739 aa16.44■□□□□ 0.22
ALDH1A3-206ENST00000560555 PRIM1P49642 420 aaKnown RBP16.43■□□□□ 0.22
ALDH1A3-206ENST00000560555 PHKG2P15735 406 aa16.42■□□□□ 0.22
ALDH1A3-206ENST00000560555 ZNF827Q17R98 1081 aa16.42■□□□□ 0.22
ALDH1A3-206ENST00000560555 NLGN2Q8NFZ4 835 aa16.42■□□□□ 0.22
ALDH1A3-206ENST00000560555 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
ALDH1A3-206ENST00000560555 POLD1P28340 1107 aa16.41■□□□□ 0.22
ALDH1A3-206ENST00000560555 RALBP1Q15311 655 aa16.41■□□□□ 0.22
ALDH1A3-206ENST00000560555 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
ALDH1A3-206ENST00000560555 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
ALDH1A3-206ENST00000560555 YBX3P16989 372 aaKnown RBP eCLIP16.4■□□□□ 0.22
ALDH1A3-206ENST00000560555 SLC16A10Q8TF71 515 aa16.4■□□□□ 0.22
ALDH1A3-206ENST00000560555 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
ALDH1A3-206ENST00000560555 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
ALDH1A3-206ENST00000560555 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
ALDH1A3-206ENST00000560555 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
ALDH1A3-206ENST00000560555 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.21
ALDH1A3-206ENST00000560555 KDM6AO15550 1401 aaPredicted RBP16.38■□□□□ 0.21
ALDH1A3-206ENST00000560555 ATP10DQ9P241 1426 aa16.38■□□□□ 0.21
ALDH1A3-206ENST00000560555 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
ALDH1A3-206ENST00000560555 PLEKHO1Q53GL0 409 aaPredicted RBP16.38■□□□□ 0.21
ALDH1A3-206ENST00000560555 GPBP1L1Q9HC44 474 aaPredicted RBP16.38■□□□□ 0.21
ALDH1A3-206ENST00000560555 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
ALDH1A3-206ENST00000560555 LRRC4BQ9NT99 713 aa16.37■□□□□ 0.21
ALDH1A3-206ENST00000560555 VIRMAQ69YN4 1812 aaKnown RBP16.37■□□□□ 0.21
ALDH1A3-206ENST00000560555 LY75O60449 1722 aa16.36■□□□□ 0.21
ALDH1A3-206ENST00000560555 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
ALDH1A3-206ENST00000560555 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
ALDH1A3-206ENST00000560555 CCDC184Q52MB2 194 aa16.36■□□□□ 0.21
ALDH1A3-206ENST00000560555 PIGBQ92521 554 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms