RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 SLC16A10Q8TF71 515 aa7.22□□□□□ -1.25
USP8-211ENST00000560527 MKRN1Q9UHC7 482 aaKnown RBP7.22□□□□□ -1.25
USP8-211ENST00000560527 FAM196BA6NMK8 535 aa7.21□□□□□ -1.26
USP8-211ENST00000560527 FSHRP23945 695 aa7.21□□□□□ -1.26
USP8-211ENST00000560527 USP4Q13107 963 aa7.21□□□□□ -1.26
USP8-211ENST00000560527 ELOAQ14241 798 aaKnown RBP7.21□□□□□ -1.26
USP8-211ENST00000560527 TSGA10IPQ3SY00 556 aa7.21□□□□□ -1.26
USP8-211ENST00000560527 KIFC2Q96AC6 838 aa7.21□□□□□ -1.26
USP8-211ENST00000560527 ATP13A2Q9NQ11 1180 aa7.21□□□□□ -1.26
USP8-211ENST00000560527 NOD1Q9Y239 953 aa7.21□□□□□ -1.26
USP8-211ENST00000560527 PCDHB11Q9Y5F2 797 aa7.21□□□□□ -1.26
USP8-211ENST00000560527 ERVH48-1M5A8F1 160 aa7.2□□□□□ -1.26
USP8-211ENST00000560527 ATP1A2P50993 1020 aa7.2□□□□□ -1.26
USP8-211ENST00000560527 CCDC116Q8IYX3 515 aa7.2□□□□□ -1.26
USP8-211ENST00000560527 DEPDC4Q8N2C3 294 aa7.2□□□□□ -1.26
USP8-211ENST00000560527 ERVK-9P63128 1117 aa7.19□□□□□ -1.26
USP8-211ENST00000560527 TRIM47Q96LD4 638 aa7.19□□□□□ -1.26
USP8-211ENST00000560527 USTQ9Y2C2 406 aa7.19□□□□□ -1.26
USP8-211ENST00000560527 MYCP01106 439 aaPredicted RBP7.18□□□□□ -1.26
USP8-211ENST00000560527 SNRPBP14678 240 aaKnown RBP7.18□□□□□ -1.26
USP8-211ENST00000560527 OXLD1Q5BKU9 147 aa7.18□□□□□ -1.26
USP8-211ENST00000560527 CC2D2BQ6DHV5 1058 aa7.18□□□□□ -1.26
USP8-211ENST00000560527 LARP1Q6PKG0 1096 aaKnown RBP7.18□□□□□ -1.26
USP8-211ENST00000560527 LARGE2Q8N3Y3 721 aa7.18□□□□□ -1.26
USP8-211ENST00000560527 CDCA7Q9BWT1 371 aaPredicted RBP7.18□□□□□ -1.26
USP8-211ENST00000560527 EMILIN1Q9Y6C2 1016 aa7.18□□□□□ -1.26
USP8-211ENST00000560527 WASF2Q9Y6W5 498 aa7.18□□□□□ -1.26
USP8-211ENST00000560527 ALDH1A1P00352 501 aa7.17□□□□□ -1.26
USP8-211ENST00000560527 CSB-PGBD3P0DP91 1061 aa7.17□□□□□ -1.26
USP8-211ENST00000560527 RASA1P20936 1047 aa7.17□□□□□ -1.26
USP8-211ENST00000560527 PTK7Q13308 1070 aa7.17□□□□□ -1.26
USP8-211ENST00000560527 PPP1R26Q5T8A7 1209 aaPredicted RBP7.17□□□□□ -1.26
USP8-211ENST00000560527 RETREG2Q8NC44 543 aa7.17□□□□□ -1.26
USP8-211ENST00000560527 PGPEP1Q9NXJ5 209 aa7.17□□□□□ -1.26
USP8-211ENST00000560527 USP17L15C9J2P7 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L10C9JJH3 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L13C9JLJ4 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L12C9JPN9 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L11C9JVI0 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L21D6R901 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L18D6R9N7 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L22D6RA61 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L17D6RBQ6 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L19D6RCP7 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L20D6RJB6 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 NR3C2P08235 984 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 SMPD1P17405 629 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 RAB15P59190 212 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 GTF2IP78347 998 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 USP17L24Q0WX57 530 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 SIX5Q8N196 739 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 OGFOD1Q8N543 542 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 TRAIPQ9BWF2 469 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 DNAAF2Q9NVR5 837 aaKnown RBP7.16□□□□□ -1.26
USP8-211ENST00000560527 PCDHGA11Q9Y5H2 935 aa7.16□□□□□ -1.26
USP8-211ENST00000560527 CLDN10P78369 228 aa7.15□□□□□ -1.26
USP8-211ENST00000560527 NNTQ13423 1086 aa7.15□□□□□ -1.26
USP8-211ENST00000560527 CRTC2Q53ET0 693 aaPredicted RBP7.15□□□□□ -1.26
USP8-211ENST00000560527 CDCA8Q53HL2 280 aa7.15□□□□□ -1.26
USP8-211ENST00000560527 ESF1Q9H501 851 aaKnown RBP7.15□□□□□ -1.26
USP8-211ENST00000560527 ZBTB7BO15156 539 aaPredicted RBP7.14□□□□□ -1.27
USP8-211ENST00000560527 LILRA1O75019 489 aa7.14□□□□□ -1.27
USP8-211ENST00000560527 PDIA4P13667 645 aaKnown RBP7.14□□□□□ -1.27
USP8-211ENST00000560527 ANKMY2Q8IV38 441 aa7.14□□□□□ -1.27
USP8-211ENST00000560527 ZNF784Q8NCA9 323 aaPredicted RBP7.14□□□□□ -1.27
USP8-211ENST00000560527 KLF16Q9BXK1 252 aaPredicted RBP7.14□□□□□ -1.27
USP8-211ENST00000560527 TMPRSS4Q9NRS4 437 aa7.14□□□□□ -1.27
USP8-211ENST00000560527 NOVA2Q9UNW9 492 aaKnown RBP7.14□□□□□ -1.27
USP8-211ENST00000560527 WASLO00401 505 aaPredicted RBP7.13□□□□□ -1.27
USP8-211ENST00000560527 SCTRP47872 440 aa7.13□□□□□ -1.27
USP8-211ENST00000560527 ZSCAN1Q8NBB4 408 aa7.13□□□□□ -1.27
USP8-211ENST00000560527 OSBPL3Q9H4L5 887 aa7.13□□□□□ -1.27
USP8-211ENST00000560527 CYLDQ9NQC7 956 aa7.13□□□□□ -1.27
USP8-211ENST00000560527 ZMIZ1Q9ULJ6 1067 aa7.13□□□□□ -1.27
USP8-211ENST00000560527 TMEM88BA6NKF7 163 aa7.12□□□□□ -1.27
USP8-211ENST00000560527 J3QL48 77 aa7.12□□□□□ -1.27
USP8-211ENST00000560527 DKK1O94907 266 aa7.12□□□□□ -1.27
USP8-211ENST00000560527 CCDC102BQ68D86 513 aa7.12□□□□□ -1.27
USP8-211ENST00000560527 CYP2U1Q7Z449 544 aa7.12□□□□□ -1.27
USP8-211ENST00000560527 FAM200AQ8TCP9 573 aa7.12□□□□□ -1.27
USP8-211ENST00000560527 IRF7Q92985 503 aa7.12□□□□□ -1.27
USP8-211ENST00000560527 RBM19Q9Y4C8 960 aaKnown RBP7.12□□□□□ -1.27
USP8-211ENST00000560527 M0R2N6 131 aa7.11□□□□□ -1.27
USP8-211ENST00000560527 GNRH1P01148 92 aa7.11□□□□□ -1.27
USP8-211ENST00000560527 SWI5Q1ZZU3 235 aa7.11□□□□□ -1.27
USP8-211ENST00000560527 Q6ZVU0 165 aa7.11□□□□□ -1.27
USP8-211ENST00000560527 ZNF594Q96JF6 807 aaPredicted RBP7.11□□□□□ -1.27
USP8-211ENST00000560527 NXF1Q9UBU9 619 aaKnown RBP7.11□□□□□ -1.27
USP8-211ENST00000560527 KIAA1024Q9UPX6 916 aa7.11□□□□□ -1.27
USP8-211ENST00000560527 TIMP2P16035 220 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 SEC13P55735 322 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 PSME1Q06323 249 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 DPYDQ12882 1025 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 TMEM164Q5U3C3 297 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 NPAS3Q8IXF0 933 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 TPCN2Q8NHX9 752 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 STK32AQ8WU08 396 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 ITPKCQ96DU7 683 aa7.1□□□□□ -1.27
USP8-211ENST00000560527 ZIC2O95409 532 aaPredicted RBP7.09□□□□□ -1.27
USP8-211ENST00000560527 ADD1P35611 737 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms