RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 TRIM52Q96A61 297 aa9.62□□□□□ -0.87
TRIP4-209ENST00000560475 APBB1O00213 710 aa9.61□□□□□ -0.87
TRIP4-209ENST00000560475 MEN1O00255 615 aa9.61□□□□□ -0.87
TRIP4-209ENST00000560475 ERVK-9P63128 1117 aa9.61□□□□□ -0.87
TRIP4-209ENST00000560475 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
TRIP4-209ENST00000560475 COL25A1Q9BXS0 654 aaPredicted RBP9.61□□□□□ -0.87
TRIP4-209ENST00000560475 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
TRIP4-209ENST00000560475 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
TRIP4-209ENST00000560475 RHOQP17081 205 aa9.6□□□□□ -0.87
TRIP4-209ENST00000560475 SCTRP47872 440 aa9.6□□□□□ -0.87
TRIP4-209ENST00000560475 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
TRIP4-209ENST00000560475 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
TRIP4-209ENST00000560475 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
TRIP4-209ENST00000560475 RNFT1Q5M7Z0 435 aa9.59□□□□□ -0.87
TRIP4-209ENST00000560475 SV2AQ7L0J3 742 aa9.59□□□□□ -0.87
TRIP4-209ENST00000560475 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
TRIP4-209ENST00000560475 ESF1Q9H501 851 aaKnown RBP9.57□□□□□ -0.88
TRIP4-209ENST00000560475 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
TRIP4-209ENST00000560475 OSBPL3Q9H4L5 887 aa9.56□□□□□ -0.88
TRIP4-209ENST00000560475 CUEDC1Q9NWM3 386 aaPredicted RBP9.56□□□□□ -0.88
TRIP4-209ENST00000560475 CYP2U1Q7Z449 544 aa9.55□□□□□ -0.88
TRIP4-209ENST00000560475 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
TRIP4-209ENST00000560475 CDCA7Q9BWT1 371 aaPredicted RBP9.55□□□□□ -0.88
TRIP4-209ENST00000560475 POU4F2Q12837 409 aa9.54□□□□□ -0.88
TRIP4-209ENST00000560475 SLC27A3Q5K4L6 730 aa9.54□□□□□ -0.88
TRIP4-209ENST00000560475 CCDC85AQ96PX6 553 aaPredicted RBP9.54□□□□□ -0.88
TRIP4-209ENST00000560475 TRAK2O60296 914 aa9.53□□□□□ -0.88
TRIP4-209ENST00000560475 GPC1P35052 558 aa9.53□□□□□ -0.88
TRIP4-209ENST00000560475 IRF5Q13568 498 aa9.53□□□□□ -0.88
TRIP4-209ENST00000560475 TSGA10IPQ3SY00 556 aa9.53□□□□□ -0.88
TRIP4-209ENST00000560475 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
TRIP4-209ENST00000560475 PRM3Q9NNZ6 103 aa9.53□□□□□ -0.88
TRIP4-209ENST00000560475 CLN3Q13286 438 aa9.52□□□□□ -0.89
TRIP4-209ENST00000560475 RAB6BQ9NRW1 208 aa9.52□□□□□ -0.89
TRIP4-209ENST00000560475 GRIP2Q9C0E4 1043 aa9.51□□□□□ -0.89
TRIP4-209ENST00000560475 GDPD2Q9HCC8 539 aa9.51□□□□□ -0.89
TRIP4-209ENST00000560475 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRIP4-209ENST00000560475 VAC14Q08AM6 782 aa9.5□□□□□ -0.89
TRIP4-209ENST00000560475 RIPOR1Q6ZS17 1223 aa9.5□□□□□ -0.89
TRIP4-209ENST00000560475 WHAMMQ8TF30 809 aa9.5□□□□□ -0.89
TRIP4-209ENST00000560475 MYCP01106 439 aaPredicted RBP9.49□□□□□ -0.89
TRIP4-209ENST00000560475 ABL2P42684 1182 aa9.49□□□□□ -0.89
TRIP4-209ENST00000560475 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
TRIP4-209ENST00000560475 GNRH1P01148 92 aa9.48□□□□□ -0.89
TRIP4-209ENST00000560475 DBN1Q16643 649 aa9.48□□□□□ -0.89
TRIP4-209ENST00000560475 ZNF385CQ66K41 422 aaPredicted RBP9.48□□□□□ -0.89
TRIP4-209ENST00000560475 NBPF10Q6P3W6 841 aaKnown RBP9.48□□□□□ -0.89
TRIP4-209ENST00000560475 PHTF2Q8N3S3 785 aa9.48□□□□□ -0.89
TRIP4-209ENST00000560475 NBPF15Q8N660 670 aa9.48□□□□□ -0.89
TRIP4-209ENST00000560475 CNKSR1Q969H4 720 aa9.48□□□□□ -0.89
TRIP4-209ENST00000560475 DYRK1BQ9Y463 629 aa9.48□□□□□ -0.89
TRIP4-209ENST00000560475 GPR25O00155 361 aa9.47□□□□□ -0.89
TRIP4-209ENST00000560475 IL2RAP01589 272 aa9.47□□□□□ -0.89
TRIP4-209ENST00000560475 SLURP2P0DP57 97 aa9.47□□□□□ -0.89
TRIP4-209ENST00000560475 CENPCQ03188 943 aa9.47□□□□□ -0.89
TRIP4-209ENST00000560475 TRIM22Q8IYM9 498 aa9.47□□□□□ -0.89
TRIP4-209ENST00000560475 SVOPQ8N4V2 548 aa9.47□□□□□ -0.89
TRIP4-209ENST00000560475 ZNF837Q96EG3 531 aaPredicted RBP9.47□□□□□ -0.89
TRIP4-209ENST00000560475 ESYT1Q9BSJ8 1104 aa9.47□□□□□ -0.89
TRIP4-209ENST00000560475 ADAMTS8Q9UP79 889 aa9.47□□□□□ -0.89
TRIP4-209ENST00000560475 GAS6Q14393 721 aa9.46□□□□□ -0.9
TRIP4-209ENST00000560475 SLFNL1Q499Z3 407 aa9.46□□□□□ -0.9
TRIP4-209ENST00000560475 DOLKQ9UPQ8 538 aa9.46□□□□□ -0.9
TRIP4-209ENST00000560475 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
TRIP4-209ENST00000560475 ADAMTS2O95450 1211 aa9.45□□□□□ -0.9
TRIP4-209ENST00000560475 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
TRIP4-209ENST00000560475 TIMMDC1Q9NPL8 285 aa9.45□□□□□ -0.9
TRIP4-209ENST00000560475 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
TRIP4-209ENST00000560475 STAU1O95793 577 aaKnown RBP9.44□□□□□ -0.9
TRIP4-209ENST00000560475 USP4Q13107 963 aa9.44□□□□□ -0.9
TRIP4-209ENST00000560475 TAS1R3Q7RTX0 852 aa9.44□□□□□ -0.9
TRIP4-209ENST00000560475 GTPBP3Q969Y2 492 aaKnown RBP9.44□□□□□ -0.9
TRIP4-209ENST00000560475 PHKA2P46019 1235 aa9.43□□□□□ -0.9
TRIP4-209ENST00000560475 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
TRIP4-209ENST00000560475 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
TRIP4-209ENST00000560475 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
TRIP4-209ENST00000560475 GMCL1Q96IK5 515 aa9.43□□□□□ -0.9
TRIP4-209ENST00000560475 H7C1W4 665 aa9.42□□□□□ -0.9
TRIP4-209ENST00000560475 SRSF11Q05519 484 aaKnown RBP9.42□□□□□ -0.9
TRIP4-209ENST00000560475 MCM6Q14566 821 aa9.42□□□□□ -0.9
TRIP4-209ENST00000560475 WDR44Q5JSH3 913 aa9.42□□□□□ -0.9
TRIP4-209ENST00000560475 LYPD4Q6UWN0 246 aa9.42□□□□□ -0.9
TRIP4-209ENST00000560475 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
TRIP4-209ENST00000560475 HRH3Q9Y5N1 445 aa9.42□□□□□ -0.9
TRIP4-209ENST00000560475 ARHGEF15O94989 841 aa9.41□□□□□ -0.9
TRIP4-209ENST00000560475 F11P03951 625 aa9.41□□□□□ -0.9
TRIP4-209ENST00000560475 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
TRIP4-209ENST00000560475 WASHC4Q2M389 1173 aa9.41□□□□□ -0.9
TRIP4-209ENST00000560475 GSK3AP49840 483 aa9.4□□□□□ -0.9
TRIP4-209ENST00000560475 SEMA3FQ13275 785 aa9.4□□□□□ -0.9
TRIP4-209ENST00000560475 ESCO1Q5FWF5 840 aa9.4□□□□□ -0.9
TRIP4-209ENST00000560475 TMEM214Q6NUQ4 689 aaKnown RBP9.4□□□□□ -0.9
TRIP4-209ENST00000560475 FHDC1Q9C0D6 1143 aaPredicted RBP9.4□□□□□ -0.9
TRIP4-209ENST00000560475 GPAMQ9HCL2 828 aa9.4□□□□□ -0.9
TRIP4-209ENST00000560475 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.9
TRIP4-209ENST00000560475 NUCKS1Q9H1E3 243 aaKnown RBP9.39□□□□□ -0.91
TRIP4-209ENST00000560475 ETNK1Q9HBU6 452 aa9.39□□□□□ -0.91
TRIP4-209ENST00000560475 MBIPQ9NS73 344 aa9.39□□□□□ -0.91
TRIP4-209ENST00000560475 CELA2BP08218 269 aaPredicted RBP9.38□□□□□ -0.91
TRIP4-209ENST00000560475 GTF2E1P29083 439 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms