RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 ENAMQ9NRM1 1142 aa7.89□□□□□ -1.15
SPG11-222ENST00000560435 ZNF837Q96EG3 531 aaPredicted RBP7.88□□□□□ -1.15
SPG11-222ENST00000560435 MBIPQ9NS73 344 aa7.88□□□□□ -1.15
SPG11-222ENST00000560435 TRIM22Q8IYM9 498 aa7.87□□□□□ -1.15
SPG11-222ENST00000560435 HMX1Q9NP08 348 aaPredicted RBP7.87□□□□□ -1.15
SPG11-222ENST00000560435 PHF20L1A8MW92 1017 aa7.86□□□□□ -1.15
SPG11-222ENST00000560435 USP17L8P0C7I0 530 aa7.86□□□□□ -1.15
SPG11-222ENST00000560435 RHOQP17081 205 aa7.86□□□□□ -1.15
SPG11-222ENST00000560435 PRICKLE2Q7Z3G6 844 aa7.86□□□□□ -1.15
SPG11-222ENST00000560435 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
SPG11-222ENST00000560435 GPC1P35052 558 aa7.85□□□□□ -1.15
SPG11-222ENST00000560435 FOXR1Q6PIV2 292 aa7.85□□□□□ -1.15
SPG11-222ENST00000560435 DDRGK1Q96HY6 314 aa7.85□□□□□ -1.15
SPG11-222ENST00000560435 IGF1RP08069 1367 aa7.84□□□□□ -1.15
SPG11-222ENST00000560435 ATP5J2-PTCD1G3V325 749 aa7.84□□□□□ -1.15
SPG11-222ENST00000560435 ATP1B4Q9UN42 357 aaPredicted RBP7.84□□□□□ -1.15
SPG11-222ENST00000560435 BCRP11274 1271 aa7.83□□□□□ -1.16
SPG11-222ENST00000560435 PLA2G4EQ3MJ16 856 aa7.83□□□□□ -1.16
SPG11-222ENST00000560435 DCAF5Q96JK2 942 aa7.83□□□□□ -1.16
SPG11-222ENST00000560435 DYRK1BQ9Y463 629 aa7.83□□□□□ -1.16
SPG11-222ENST00000560435 CNTNAP5Q8WYK1 1306 aa7.82□□□□□ -1.16
SPG11-222ENST00000560435 GPR25O00155 361 aa7.82□□□□□ -1.16
SPG11-222ENST00000560435 MSTNO14793 375 aa7.82□□□□□ -1.16
SPG11-222ENST00000560435 DBN1Q16643 649 aa7.82□□□□□ -1.16
SPG11-222ENST00000560435 RIPOR1Q6ZS17 1223 aa7.82□□□□□ -1.16
SPG11-222ENST00000560435 PODNQ7Z5L7 613 aa7.82□□□□□ -1.16
SPG11-222ENST00000560435 BEND7Q8N7W2 519 aaPredicted RBP7.82□□□□□ -1.16
SPG11-222ENST00000560435 FAM117AQ9C073 453 aa7.82□□□□□ -1.16
SPG11-222ENST00000560435 KDM4CQ9H3R0 1056 aa7.82□□□□□ -1.16
SPG11-222ENST00000560435 H7C1W4 665 aa7.81□□□□□ -1.16
SPG11-222ENST00000560435 CCDC125Q86Z20 511 aa7.81□□□□□ -1.16
SPG11-222ENST00000560435 LRRC4BQ9NT99 713 aa7.81□□□□□ -1.16
SPG11-222ENST00000560435 MEN1O00255 615 aa7.8□□□□□ -1.16
SPG11-222ENST00000560435 NEDD1Q8NHV4 660 aa7.8□□□□□ -1.16
SPG11-222ENST00000560435 ACDQ96AP0 544 aa7.8□□□□□ -1.16
SPG11-222ENST00000560435 TRERF1Q96PN7 1200 aa7.8□□□□□ -1.16
SPG11-222ENST00000560435 SPOCK3Q9BQ16 436 aa7.8□□□□□ -1.16
SPG11-222ENST00000560435 GPBP1L1Q9HC44 474 aaPredicted RBP7.8□□□□□ -1.16
SPG11-222ENST00000560435 A0A1W2PRU2 124 aa7.79□□□□□ -1.16
SPG11-222ENST00000560435 ADAM23O75077 832 aa7.79□□□□□ -1.16
SPG11-222ENST00000560435 ITGB2P05107 769 aa7.79□□□□□ -1.16
SPG11-222ENST00000560435 RFC5P40937 340 aa7.79□□□□□ -1.16
SPG11-222ENST00000560435 ERVK-9P63128 1117 aa7.79□□□□□ -1.16
SPG11-222ENST00000560435 GTPBP3Q969Y2 492 aaKnown RBP7.79□□□□□ -1.16
SPG11-222ENST00000560435 TRIM34Q9BYJ4 488 aa7.79□□□□□ -1.16
SPG11-222ENST00000560435 ZBBXA8MT70 800 aa7.78□□□□□ -1.16
SPG11-222ENST00000560435 GIGYF1O75420 1035 aaPredicted RBP7.78□□□□□ -1.16
SPG11-222ENST00000560435 POU4F2Q12837 409 aa7.78□□□□□ -1.16
SPG11-222ENST00000560435 CC2D2BQ6DHV5 1058 aa7.78□□□□□ -1.16
SPG11-222ENST00000560435 PCDHB9Q9Y5E1 797 aa7.78□□□□□ -1.16
SPG11-222ENST00000560435 PROCP04070 461 aa7.77□□□□□ -1.17
SPG11-222ENST00000560435 WDR44Q5JSH3 913 aa7.77□□□□□ -1.17
SPG11-222ENST00000560435 SLC27A3Q5K4L6 730 aa7.77□□□□□ -1.17
SPG11-222ENST00000560435 NBPF10Q6P3W6 841 aaKnown RBP7.77□□□□□ -1.17
SPG11-222ENST00000560435 NBPF15Q8N660 670 aa7.77□□□□□ -1.17
SPG11-222ENST00000560435 NLRP3Q96P20 1036 aa7.77□□□□□ -1.17
SPG11-222ENST00000560435 GAS2L1Q99501 681 aaPredicted RBP7.77□□□□□ -1.17
SPG11-222ENST00000560435 GRIP2Q9C0E4 1043 aa7.77□□□□□ -1.17
SPG11-222ENST00000560435 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
SPG11-222ENST00000560435 SPATA31C2B4DYI2 1134 aa7.76□□□□□ -1.17
SPG11-222ENST00000560435 MX2P20592 715 aa7.76□□□□□ -1.17
SPG11-222ENST00000560435 CLN3Q13286 438 aa7.76□□□□□ -1.17
SPG11-222ENST00000560435 CYP2U1Q7Z449 544 aa7.76□□□□□ -1.17
SPG11-222ENST00000560435 OIP5O43482 229 aa7.75□□□□□ -1.17
SPG11-222ENST00000560435 FBXO45P0C2W1 286 aa7.75□□□□□ -1.17
SPG11-222ENST00000560435 XP32Q5T750 250 aa7.75□□□□□ -1.17
SPG11-222ENST00000560435 RNF20Q5VTR2 975 aa7.75□□□□□ -1.17
SPG11-222ENST00000560435 NUCKS1Q9H1E3 243 aaKnown RBP7.75□□□□□ -1.17
SPG11-222ENST00000560435 GALNT6Q8NCL4 622 aa7.74□□□□□ -1.17
SPG11-222ENST00000560435 F11P03951 625 aa7.73□□□□□ -1.17
SPG11-222ENST00000560435 MAP2K3P46734 347 aa7.73□□□□□ -1.17
SPG11-222ENST00000560435 TMEM259Q4ZIN3 620 aa7.73□□□□□ -1.17
SPG11-222ENST00000560435 TAS1R3Q7RTX0 852 aa7.73□□□□□ -1.17
SPG11-222ENST00000560435 OXCT2Q9BYC2 517 aaPredicted RBP7.73□□□□□ -1.17
SPG11-222ENST00000560435 TIMMDC1Q9NPL8 285 aa7.73□□□□□ -1.17
SPG11-222ENST00000560435 WASLO00401 505 aaPredicted RBP7.72□□□□□ -1.17
SPG11-222ENST00000560435 TRAK2O60296 914 aa7.72□□□□□ -1.17
SPG11-222ENST00000560435 MCCD1P59942 119 aaPredicted RBP7.72□□□□□ -1.17
SPG11-222ENST00000560435 CFHR5Q9BXR6 569 aa7.72□□□□□ -1.17
SPG11-222ENST00000560435 SCTRP47872 440 aa7.71□□□□□ -1.18
SPG11-222ENST00000560435 ZNF592Q92610 1267 aa7.71□□□□□ -1.18
SPG11-222ENST00000560435 GJD4Q96KN9 370 aaPredicted RBP7.71□□□□□ -1.18
SPG11-222ENST00000560435 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
SPG11-222ENST00000560435 ARHGEF10LQ9HCE6 1279 aa7.71□□□□□ -1.18
SPG11-222ENST00000560435 GOPCQ9HD26 462 aa7.71□□□□□ -1.18
SPG11-222ENST00000560435 ALYREFQ86V81 257 aaKnown RBP7.7□□□□□ -1.18
SPG11-222ENST00000560435 THBS1P07996 1170 aa7.69□□□□□ -1.18
SPG11-222ENST00000560435 SNRPNP63162 240 aaKnown RBP7.69□□□□□ -1.18
SPG11-222ENST00000560435 NR1H3Q13133 447 aa7.69□□□□□ -1.18
SPG11-222ENST00000560435 MKL2Q9ULH7 1088 aa7.69□□□□□ -1.18
SPG11-222ENST00000560435 PCDHB11Q9Y5F2 797 aa7.69□□□□□ -1.18
SPG11-222ENST00000560435 SHISA8B8ZZ34 492 aa7.68□□□□□ -1.18
SPG11-222ENST00000560435 K7ELQ4 463 aaPredicted RBP7.68□□□□□ -1.18
SPG11-222ENST00000560435 PCMTD1Q96MG8 357 aaPredicted RBP7.68□□□□□ -1.18
SPG11-222ENST00000560435 PHF24Q9UPV7 400 aa7.68□□□□□ -1.18
SPG11-222ENST00000560435 KRBA1A5PL33 1030 aa7.67□□□□□ -1.18
SPG11-222ENST00000560435 GNRH1P01148 92 aa7.67□□□□□ -1.18
SPG11-222ENST00000560435 KLRG1Q96E93 195 aa7.67□□□□□ -1.18
SPG11-222ENST00000560435 ESYT1Q9BSJ8 1104 aa7.67□□□□□ -1.18
SPG11-222ENST00000560435 ESF1Q9H501 851 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms