RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PXDNQ92626 1479 aa14.01□□□□□ -0.17
SNRPA1-211ENST00000560433 NOB1Q9ULX3 412 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-211ENST00000560433 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
SNRPA1-211ENST00000560433 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
SNRPA1-211ENST00000560433 VAMP4O75379 141 aa14□□□□□ -0.17
SNRPA1-211ENST00000560433 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
SNRPA1-211ENST00000560433 GAS2L2Q8NHY3 880 aa13.99□□□□□ -0.17
SNRPA1-211ENST00000560433 GNAT3A8MTJ3 354 aa13.98□□□□□ -0.17
SNRPA1-211ENST00000560433 IL17REQ8NFR9 667 aa13.98□□□□□ -0.17
SNRPA1-211ENST00000560433 NLRP2Q9NX02 1062 aa13.98□□□□□ -0.17
SNRPA1-211ENST00000560433 KIAA0232Q92628 1395 aa13.97□□□□□ -0.17
SNRPA1-211ENST00000560433 CSB-PGBD3P0DP91 1061 aa13.97□□□□□ -0.17
SNRPA1-211ENST00000560433 TRIM27P14373 513 aa13.97□□□□□ -0.17
SNRPA1-211ENST00000560433 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
SNRPA1-211ENST00000560433 ZKSCAN2Q63HK3 967 aa13.97□□□□□ -0.17
SNRPA1-211ENST00000560433 CHL1O00533 1208 aa13.96□□□□□ -0.17
SNRPA1-211ENST00000560433 PDE3AQ14432 1141 aa13.96□□□□□ -0.17
SNRPA1-211ENST00000560433 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-211ENST00000560433 LGR6Q9HBX8 967 aa13.96□□□□□ -0.17
SNRPA1-211ENST00000560433 TSPYL4Q9UJ04 414 aa13.96□□□□□ -0.17
SNRPA1-211ENST00000560433 ERBB3P21860 1342 aa13.96□□□□□ -0.17
SNRPA1-211ENST00000560433 CRB1P82279 1406 aa13.96□□□□□ -0.18
SNRPA1-211ENST00000560433 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
SNRPA1-211ENST00000560433 SOS2Q07890 1332 aaPredicted RBP13.95□□□□□ -0.18
SNRPA1-211ENST00000560433 MPRIPQ6WCQ1 1025 aa13.95□□□□□ -0.18
SNRPA1-211ENST00000560433 DZIP1LQ8IYY4 767 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-211ENST00000560433 PHRF1Q9P1Y6 1649 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-211ENST00000560433 ZNF530Q6P9A1 599 aaPredicted RBP13.94□□□□□ -0.18
SNRPA1-211ENST00000560433 NECTIN2Q92692 538 aa13.94□□□□□ -0.18
SNRPA1-211ENST00000560433 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
SNRPA1-211ENST00000560433 ATF7IPQ6VMQ6 1270 aa13.93□□□□□ -0.18
SNRPA1-211ENST00000560433 ITPRIPQ8IWB1 547 aa13.93□□□□□ -0.18
SNRPA1-211ENST00000560433 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
SNRPA1-211ENST00000560433 PRDM11Q9NQV5 511 aa13.93□□□□□ -0.18
SNRPA1-211ENST00000560433 IGHDP01880 384 aa13.92□□□□□ -0.18
SNRPA1-211ENST00000560433 TMEM57Q8N5G2 664 aa13.92□□□□□ -0.18
SNRPA1-211ENST00000560433 ALDH1L2Q3SY69 923 aa13.92□□□□□ -0.18
SNRPA1-211ENST00000560433 MVPQ14764 893 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-211ENST00000560433 PLEKHO1Q53GL0 409 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-211ENST00000560433 PCDHB15Q9Y5E8 787 aa13.91□□□□□ -0.18
SNRPA1-211ENST00000560433 STRN4Q9NRL3 753 aa13.9□□□□□ -0.18
SNRPA1-211ENST00000560433 KCNQ3O43525 872 aa13.9□□□□□ -0.18
SNRPA1-211ENST00000560433 KIF16BQ96L93 1317 aa13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 PIP4K2BP78356 416 aa13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 USP35Q9P2H5 1018 aa13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 CRYBG1Q9Y4K1 1723 aa13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 KDM2BQ8NHM5 1336 aa13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 COL18A1P39060 1754 aa13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 TAF7Q15545 349 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 RAPGEF4Q8WZA2 1011 aa13.89□□□□□ -0.19
SNRPA1-211ENST00000560433 HTATSF1O43719 755 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-211ENST00000560433 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-211ENST00000560433 AKAP4Q5JQC9 854 aa13.88□□□□□ -0.19
SNRPA1-211ENST00000560433 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
SNRPA1-211ENST00000560433 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
SNRPA1-211ENST00000560433 TEFQ10587 303 aa13.86□□□□□ -0.19
SNRPA1-211ENST00000560433 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
SNRPA1-211ENST00000560433 MEGF6O75095 1541 aa13.86□□□□□ -0.19
SNRPA1-211ENST00000560433 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
SNRPA1-211ENST00000560433 G2E3Q7L622 706 aa13.86□□□□□ -0.19
SNRPA1-211ENST00000560433 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-211ENST00000560433 ROBO1Q9Y6N7 1651 aa13.86□□□□□ -0.19
SNRPA1-211ENST00000560433 RNMTO43148 476 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 TATP17735 454 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 C1orf115Q9H7X2 142 aa13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 CPDO75976 1380 aa13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 BTBD11A6QL63 1104 aa13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 RGS3P49796 1198 aa13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 LARP1Q6PKG0 1096 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 CENPQQ7L2Z9 268 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 LTBP4Q8N2S1 1624 aa13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
SNRPA1-211ENST00000560433 NCAPD2Q15021 1401 aa13.84□□□□□ -0.19
SNRPA1-211ENST00000560433 EIF2S2P20042 333 aaKnown RBP13.84□□□□□ -0.19
SNRPA1-211ENST00000560433 NHSL1Q5SYE7 1610 aa13.84□□□□□ -0.19
SNRPA1-211ENST00000560433 EVA1CP58658 441 aa13.84□□□□□ -0.19
SNRPA1-211ENST00000560433 F6X3S4 739 aa13.83□□□□□ -0.19
SNRPA1-211ENST00000560433 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.19
SNRPA1-211ENST00000560433 DDX19BQ9UMR2 479 aa13.83□□□□□ -0.19
SNRPA1-211ENST00000560433 LRRC37A3O60309 1634 aa13.83□□□□□ -0.2
SNRPA1-211ENST00000560433 PRAMEF22A3QJZ6 481 aa13.83□□□□□ -0.2
SNRPA1-211ENST00000560433 MS4A1P11836 297 aa13.83□□□□□ -0.2
SNRPA1-211ENST00000560433 SLC39A6Q13433 755 aa13.83□□□□□ -0.2
SNRPA1-211ENST00000560433 FAM208AQ9UK61 1670 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-211ENST00000560433 CYP27B1O15528 508 aa13.82□□□□□ -0.2
SNRPA1-211ENST00000560433 BTG4Q9NY30 223 aa13.82□□□□□ -0.2
SNRPA1-211ENST00000560433 WDR17Q8IZU2 1322 aa13.82□□□□□ -0.2
SNRPA1-211ENST00000560433 ANXA1P04083 346 aa13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 PHKG2P15735 406 aa13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 SLC4A10Q6U841 1118 aa13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 NFATC2IPQ8NCF5 419 aa13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 LMO7Q8WWI1 1683 aa13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 COL5A2P05997 1499 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 EIF4A1P60842 406 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 ARHGAP45Q92619 1136 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms