RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 INSRP06213 1382 aa20.89■□□□□ 0.93
SNRPA1-210ENST00000560383 FLT4P35916 1363 aa20.89■□□□□ 0.93
SNRPA1-210ENST00000560383 STK32BQ9NY57 414 aa20.89■□□□□ 0.93
SNRPA1-210ENST00000560383 SLC15A2Q16348 729 aa20.88■□□□□ 0.93
SNRPA1-210ENST00000560383 QSER1Q2KHR3 1735 aa20.87■□□□□ 0.93
SNRPA1-210ENST00000560383 NSD2O96028 1365 aa20.86■□□□□ 0.93
SNRPA1-210ENST00000560383 PPP1R1BQ9UD71 204 aaPredicted RBP20.86■□□□□ 0.93
SNRPA1-210ENST00000560383 LY75O60449 1722 aa20.86■□□□□ 0.93
SNRPA1-210ENST00000560383 HSP90AB2PQ58FF8 381 aa20.85■□□□□ 0.93
SNRPA1-210ENST00000560383 DDX54Q8TDD1 881 aaKnown RBP20.85■□□□□ 0.93
SNRPA1-210ENST00000560383 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-210ENST00000560383 EMILIN1Q9Y6C2 1016 aa20.84■□□□□ 0.93
SNRPA1-210ENST00000560383 NBPF6Q5VWK0 638 aa20.83■□□□□ 0.93
SNRPA1-210ENST00000560383 NBPF4Q96M43 638 aa20.83■□□□□ 0.93
SNRPA1-210ENST00000560383 PKD1L3Q7Z443 1732 aa20.82■□□□□ 0.92
SNRPA1-210ENST00000560383 NCAPD2Q15021 1401 aa20.82■□□□□ 0.92
SNRPA1-210ENST00000560383 SLC27A3Q5K4L6 730 aa20.82■□□□□ 0.92
SNRPA1-210ENST00000560383 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-210ENST00000560383 POLKQ9UBT6 870 aa20.82■□□□□ 0.92
SNRPA1-210ENST00000560383 WASHC2AQ641Q2 1341 aa20.81■□□□□ 0.92
SNRPA1-210ENST00000560383 RAPGEF4Q8WZA2 1011 aa20.81■□□□□ 0.92
SNRPA1-210ENST00000560383 KNSTRNQ9Y448 316 aa20.81■□□□□ 0.92
SNRPA1-210ENST00000560383 MAP2P11137 1827 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-210ENST00000560383 AMER1Q5JTC6 1135 aaPredicted RBP20.8■□□□□ 0.92
SNRPA1-210ENST00000560383 PER1O15534 1290 aaPredicted RBP20.79■□□□□ 0.92
SNRPA1-210ENST00000560383 ZBTB7AO95365 584 aa20.79■□□□□ 0.92
SNRPA1-210ENST00000560383 PTGER2P43116 358 aa20.79■□□□□ 0.92
SNRPA1-210ENST00000560383 MTFR1LQ9H019 292 aa20.79■□□□□ 0.92
SNRPA1-210ENST00000560383 LRRC4BQ9NT99 713 aa20.79■□□□□ 0.92
SNRPA1-210ENST00000560383 TATP17735 454 aaPredicted RBP20.78■□□□□ 0.92
SNRPA1-210ENST00000560383 TUBGCP6Q96RT7 1819 aa20.78■□□□□ 0.92
SNRPA1-210ENST00000560383 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
SNRPA1-210ENST00000560383 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
SNRPA1-210ENST00000560383 PRIM1P49642 420 aaKnown RBP20.77■□□□□ 0.92
SNRPA1-210ENST00000560383 USHBP1Q8N6Y0 703 aa20.77■□□□□ 0.92
SNRPA1-210ENST00000560383 COL24A1Q17RW2 1714 aa20.77■□□□□ 0.92
SNRPA1-210ENST00000560383 SYTL4Q96C24 671 aaPredicted RBP20.76■□□□□ 0.91
SNRPA1-210ENST00000560383 PPM1GO15355 546 aaPredicted RBP20.75■□□□□ 0.91
SNRPA1-210ENST00000560383 TNNT2P45379 298 aaPredicted RBP20.75■□□□□ 0.91
SNRPA1-210ENST00000560383 ZNF827Q17R98 1081 aa20.75■□□□□ 0.91
SNRPA1-210ENST00000560383 AKT1S1Q96B36 256 aa20.75■□□□□ 0.91
SNRPA1-210ENST00000560383 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
SNRPA1-210ENST00000560383 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
SNRPA1-210ENST00000560383 TOGARAM1Q9Y4F4 1720 aa20.74■□□□□ 0.91
SNRPA1-210ENST00000560383 ATF5Q9Y2D1 282 aaPredicted RBP20.73■□□□□ 0.91
SNRPA1-210ENST00000560383 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
SNRPA1-210ENST00000560383 ITGB4P16144 1822 aa20.72■□□□□ 0.91
SNRPA1-210ENST00000560383 UTRNP46939 3433 aa20.72■□□□□ 0.91
SNRPA1-210ENST00000560383 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
SNRPA1-210ENST00000560383 C5P01031 1676 aa20.71■□□□□ 0.91
SNRPA1-210ENST00000560383 DCAF8L1A6NGE4 600 aa20.71■□□□□ 0.91
SNRPA1-210ENST00000560383 PIAS4Q8N2W9 510 aaPredicted RBP20.71■□□□□ 0.91
SNRPA1-210ENST00000560383 SLC16A10Q8TF71 515 aa20.71■□□□□ 0.91
SNRPA1-210ENST00000560383 MAP3K5Q99683 1374 aa20.71■□□□□ 0.91
SNRPA1-210ENST00000560383 EIF4A2Q14240 407 aaKnown RBP20.7■□□□□ 0.9
SNRPA1-210ENST00000560383 EYA1Q99502 592 aa20.7■□□□□ 0.9
SNRPA1-210ENST00000560383 TAF1LQ8IZX4 1826 aa20.69■□□□□ 0.9
SNRPA1-210ENST00000560383 PNPLA7Q6ZV29 1317 aa20.69■□□□□ 0.9
SNRPA1-210ENST00000560383 CYP27B1O15528 508 aa20.68■□□□□ 0.9
SNRPA1-210ENST00000560383 HMGB2P26583 209 aaKnown RBP20.68■□□□□ 0.9
SNRPA1-210ENST00000560383 CCNL1Q9UK58 526 aaPredicted RBP20.68■□□□□ 0.9
SNRPA1-210ENST00000560383 FHDC1Q9C0D6 1143 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-210ENST00000560383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNRPA1-210ENST00000560383 ARXQ96QS3 562 aa20.66■□□□□ 0.9
SNRPA1-210ENST00000560383 TFCP2L1Q9NZI6 479 aa20.66■□□□□ 0.9
SNRPA1-210ENST00000560383 SPG7Q9UQ90 795 aa20.66■□□□□ 0.9
SNRPA1-210ENST00000560383 IGSF1Q8N6C5 1336 aa20.65■□□□□ 0.9
SNRPA1-210ENST00000560383 NKX1-1Q15270 411 aaPredicted RBP20.65■□□□□ 0.9
SNRPA1-210ENST00000560383 SYT17Q9BSW7 474 aa20.65■□□□□ 0.9
SNRPA1-210ENST00000560383 PALLDQ8WX93 1383 aa20.64■□□□□ 0.89
SNRPA1-210ENST00000560383 KCNQ4P56696 695 aa20.64■□□□□ 0.89
SNRPA1-210ENST00000560383 YY1P25490 414 aa20.63■□□□□ 0.89
SNRPA1-210ENST00000560383 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
SNRPA1-210ENST00000560383 GOLGB1Q14789 3259 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-210ENST00000560383 C4BP0C0L5 1744 aa20.61■□□□□ 0.89
SNRPA1-210ENST00000560383 SMARCC1Q92922 1105 aaPredicted RBP20.61■□□□□ 0.89
SNRPA1-210ENST00000560383 POLD1P28340 1107 aa20.6■□□□□ 0.89
SNRPA1-210ENST00000560383 IL13P35225 146 aa20.6■□□□□ 0.89
SNRPA1-210ENST00000560383 MTHFSP49914 203 aa20.6■□□□□ 0.89
SNRPA1-210ENST00000560383 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
SNRPA1-210ENST00000560383 IFNL2Q8IZJ0 200 aa20.58■□□□□ 0.89
SNRPA1-210ENST00000560383 CHD4Q14839 1912 aa20.58■□□□□ 0.88
SNRPA1-210ENST00000560383 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.88
SNRPA1-210ENST00000560383 PHKG2P15735 406 aa20.57■□□□□ 0.88
SNRPA1-210ENST00000560383 PIGBQ92521 554 aa20.57■□□□□ 0.88
SNRPA1-210ENST00000560383 ZNF831Q5JPB2 1677 aa20.57■□□□□ 0.88
SNRPA1-210ENST00000560383 KDRP35968 1356 aa20.57■□□□□ 0.88
SNRPA1-210ENST00000560383 FLAD1Q8NFF5 587 aa20.56■□□□□ 0.88
SNRPA1-210ENST00000560383 COL23A1Q86Y22 540 aaPredicted RBP20.55■□□□□ 0.88
SNRPA1-210ENST00000560383 TMOD3Q9NYL9 352 aa20.54■□□□□ 0.88
SNRPA1-210ENST00000560383 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
SNRPA1-210ENST00000560383 SULT6B1Q6IMI4 303 aa20.52■□□□□ 0.88
SNRPA1-210ENST00000560383 LOC102724428A0A0B4J2F2 783 aa20.51■□□□□ 0.87
SNRPA1-210ENST00000560383 MSH5O43196 834 aa20.51■□□□□ 0.87
SNRPA1-210ENST00000560383 HSP90AB1P08238 724 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-210ENST00000560383 SIK1P57059 783 aa20.51■□□□□ 0.87
SNRPA1-210ENST00000560383 AMOTQ4VCS5 1084 aa20.51■□□□□ 0.87
SNRPA1-210ENST00000560383 AK7Q96M32 723 aa20.51■□□□□ 0.87
SNRPA1-210ENST00000560383 COL3A1P02461 1466 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-210ENST00000560383 DIAPH1O60610 1272 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms