RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZHX3Q9H4I2 956 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 EXOC5O00471 708 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 CAVIN4Q5BKX8 364 aa15.97■□□□□ 0.15
TRAF3-208ENST00000560371 MCM10Q7L590 875 aa15.96■□□□□ 0.15
TRAF3-208ENST00000560371 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
TRAF3-208ENST00000560371 RDXP35241 583 aaKnown RBP15.96■□□□□ 0.15
TRAF3-208ENST00000560371 BLOC1S2Q6QNY1 142 aa15.96■□□□□ 0.15
TRAF3-208ENST00000560371 FANCAO15360 1455 aa15.96■□□□□ 0.14
TRAF3-208ENST00000560371 ZNF287Q9HBT7 754 aa15.96■□□□□ 0.14
TRAF3-208ENST00000560371 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
TRAF3-208ENST00000560371 RUFY1Q96T51 708 aa15.95■□□□□ 0.14
TRAF3-208ENST00000560371 AKAP2Q9Y2D5 859 aa15.95■□□□□ 0.14
TRAF3-208ENST00000560371 DENND4BO75064 1496 aaPredicted RBP15.95■□□□□ 0.14
TRAF3-208ENST00000560371 IL1RAPL2Q9NP60 686 aa15.95■□□□□ 0.14
TRAF3-208ENST00000560371 FIBPO43427 364 aa15.95■□□□□ 0.14
TRAF3-208ENST00000560371 CWC27Q6UX04 472 aaKnown RBP15.95■□□□□ 0.14
TRAF3-208ENST00000560371 USHBP1Q8N6Y0 703 aa15.95■□□□□ 0.14
TRAF3-208ENST00000560371 BRPF1P55201 1214 aaPredicted RBP15.94■□□□□ 0.14
TRAF3-208ENST00000560371 WASLO00401 505 aaPredicted RBP15.94■□□□□ 0.14
TRAF3-208ENST00000560371 CDKL5O76039 1030 aa15.94■□□□□ 0.14
TRAF3-208ENST00000560371 CALRP27797 417 aaKnown RBP15.94■□□□□ 0.14
TRAF3-208ENST00000560371 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
TRAF3-208ENST00000560371 LETM1O95202 739 aaPredicted RBP15.94■□□□□ 0.14
TRAF3-208ENST00000560371 CHD1LQ86WJ1 897 aa15.94■□□□□ 0.14
TRAF3-208ENST00000560371 AIDAQ96BJ3 306 aa15.94■□□□□ 0.14
TRAF3-208ENST00000560371 MPHOSPH10O00566 681 aaKnown RBP15.94■□□□□ 0.14
TRAF3-208ENST00000560371 MBD3O95983 291 aa15.94■□□□□ 0.14
TRAF3-208ENST00000560371 STIM1Q13586 685 aa15.94■□□□□ 0.14
TRAF3-208ENST00000560371 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
TRAF3-208ENST00000560371 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
TRAF3-208ENST00000560371 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
TRAF3-208ENST00000560371 NAIPQ13075 1403 aa15.93■□□□□ 0.14
TRAF3-208ENST00000560371 IFIT1P09914 478 aaKnown RBP15.93■□□□□ 0.14
TRAF3-208ENST00000560371 DCTN1Q14203 1278 aa15.93■□□□□ 0.14
TRAF3-208ENST00000560371 TRIM5Q9C035 493 aa15.93■□□□□ 0.14
TRAF3-208ENST00000560371 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
TRAF3-208ENST00000560371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.93■□□□□ 0.14
TRAF3-208ENST00000560371 ME1P48163 572 aa15.93■□□□□ 0.14
TRAF3-208ENST00000560371 WDHD1O75717 1129 aaPredicted RBP15.92■□□□□ 0.14
TRAF3-208ENST00000560371 IFIT5Q13325 482 aaKnown RBP15.92■□□□□ 0.14
TRAF3-208ENST00000560371 RPGRQ92834 1020 aaKnown RBP15.92■□□□□ 0.14
TRAF3-208ENST00000560371 PIP4K2AP48426 406 aaPredicted RBP15.92■□□□□ 0.14
TRAF3-208ENST00000560371 NME9Q86XW9 330 aa15.92■□□□□ 0.14
TRAF3-208ENST00000560371 SMARCE1Q969G3 411 aa15.92■□□□□ 0.14
TRAF3-208ENST00000560371 TTLL5Q6EMB2 1281 aa15.92■□□□□ 0.14
TRAF3-208ENST00000560371 THUMPD2Q9BTF0 503 aaKnown RBP15.92■□□□□ 0.14
TRAF3-208ENST00000560371 KRT32Q14532 448 aa15.92■□□□□ 0.14
TRAF3-208ENST00000560371 KIF1BPQ96EK5 621 aa15.92■□□□□ 0.14
TRAF3-208ENST00000560371 NOL7Q9UMY1 257 aaKnown RBP15.92■□□□□ 0.14
TRAF3-208ENST00000560371 ZNF76P36508 570 aa15.92■□□□□ 0.14
TRAF3-208ENST00000560371 MNS1Q8NEH6 495 aa15.92■□□□□ 0.14
TRAF3-208ENST00000560371 SMC2O95347 1197 aa15.91■□□□□ 0.14
TRAF3-208ENST00000560371 USP5P45974 858 aa15.91■□□□□ 0.14
TRAF3-208ENST00000560371 AEBP1Q8IUX7 1158 aa15.91■□□□□ 0.14
TRAF3-208ENST00000560371 RNF214Q8ND24 703 aa15.91■□□□□ 0.14
TRAF3-208ENST00000560371 CAVIN1Q6NZI2 390 aaKnown RBP15.91■□□□□ 0.14
TRAF3-208ENST00000560371 RPAP2Q8IXW5 612 aaPredicted RBP15.91■□□□□ 0.14
TRAF3-208ENST00000560371 FANCIQ9NVI1 1328 aa15.91■□□□□ 0.14
TRAF3-208ENST00000560371 LARP1BQ659C4 914 aaKnown RBP15.9■□□□□ 0.14
TRAF3-208ENST00000560371 CRACR2BQ8N4Y2 399 aaPredicted RBP15.9■□□□□ 0.14
TRAF3-208ENST00000560371 EXOC6BQ9Y2D4 811 aa15.9■□□□□ 0.14
TRAF3-208ENST00000560371 CDR1P51861 262 aa15.9■□□□□ 0.14
TRAF3-208ENST00000560371 IMMTQ16891 758 aaKnown RBP15.9■□□□□ 0.14
TRAF3-208ENST00000560371 MYD88Q99836 296 aa15.9■□□□□ 0.14
TRAF3-208ENST00000560371 PDCL3Q9H2J4 239 aa15.9■□□□□ 0.14
TRAF3-208ENST00000560371 NASPP49321 788 aaPredicted RBP15.9■□□□□ 0.14
TRAF3-208ENST00000560371 CAGE1Q8TC20 777 aa15.9■□□□□ 0.14
TRAF3-208ENST00000560371 BMP2KQ9NSY1 1161 aaPredicted RBP15.9■□□□□ 0.14
TRAF3-208ENST00000560371 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
TRAF3-208ENST00000560371 MKNK2Q9HBH9 465 aa15.9■□□□□ 0.14
TRAF3-208ENST00000560371 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
TRAF3-208ENST00000560371 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
TRAF3-208ENST00000560371 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
TRAF3-208ENST00000560371 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
TRAF3-208ENST00000560371 MINDY4BA8MYZ0 360 aa15.89■□□□□ 0.13
TRAF3-208ENST00000560371 PRPF40AO75400 957 aaKnown RBP15.89■□□□□ 0.13
TRAF3-208ENST00000560371 ZNHIT6Q9NWK9 470 aaKnown RBP15.89■□□□□ 0.13
TRAF3-208ENST00000560371 U3KPZ7 1027 aaPredicted RBP15.89■□□□□ 0.13
TRAF3-208ENST00000560371 KRT85P78386 507 aa15.88■□□□□ 0.13
TRAF3-208ENST00000560371 PIBF1Q8WXW3 757 aa15.88■□□□□ 0.13
TRAF3-208ENST00000560371 AK7Q96M32 723 aa15.88■□□□□ 0.13
TRAF3-208ENST00000560371 SSBP05455 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRAF3-208ENST00000560371 TMEM57Q8N5G2 664 aa15.88■□□□□ 0.13
TRAF3-208ENST00000560371 JAKMIP1Q96N16 626 aaKnown RBP15.88■□□□□ 0.13
TRAF3-208ENST00000560371 MYO6Q9UM54 1294 aa15.88■□□□□ 0.13
TRAF3-208ENST00000560371 MSH6P52701 1360 aa15.88■□□□□ 0.13
TRAF3-208ENST00000560371 FAM13BQ9NYF5 915 aa15.87■□□□□ 0.13
TRAF3-208ENST00000560371 RAB11FIP3O75154 756 aa15.87■□□□□ 0.13
TRAF3-208ENST00000560371 WDR33Q9C0J8 1336 aaKnown RBP15.87■□□□□ 0.13
TRAF3-208ENST00000560371 GLRX3O76003 335 aaKnown RBP15.87■□□□□ 0.13
TRAF3-208ENST00000560371 ITSN2Q9NZM3 1697 aa15.87■□□□□ 0.13
TRAF3-208ENST00000560371 DBF4Q9UBU7 674 aaPredicted RBP15.87■□□□□ 0.13
TRAF3-208ENST00000560371 CFAP45Q9UL16 551 aa15.86■□□□□ 0.13
TRAF3-208ENST00000560371 TEX35Q5T0J7 233 aa15.86■□□□□ 0.13
TRAF3-208ENST00000560371 NAPBQ9H115 298 aa15.86■□□□□ 0.13
TRAF3-208ENST00000560371 LUC7LQ9NQ29 371 aaKnown RBP15.86■□□□□ 0.13
TRAF3-208ENST00000560371 ARGLU1Q9NWB6 273 aaPredicted RBP15.86■□□□□ 0.13
TRAF3-208ENST00000560371 SEC63Q9UGP8 760 aaKnown RBP15.86■□□□□ 0.13
TRAF3-208ENST00000560371 ADGRF5Q8IZF2 1346 aa15.86■□□□□ 0.13
TRAF3-208ENST00000560371 TRAK2O60296 914 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms