RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
HMBOX1-213ENST00000560269 AMOTQ4VCS5 1084 aa18.01■□□□□ 0.47
HMBOX1-213ENST00000560269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.472e-6■□□□□ 11.2
HMBOX1-213ENST00000560269 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
HMBOX1-213ENST00000560269 PLEKHO1Q53GL0 409 aaPredicted RBP18■□□□□ 0.47
HMBOX1-213ENST00000560269 BARGINQ6ZT62 677 aa18■□□□□ 0.47
HMBOX1-213ENST00000560269 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
HMBOX1-213ENST00000560269 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
HMBOX1-213ENST00000560269 USP35Q9P2H5 1018 aa18■□□□□ 0.47
HMBOX1-213ENST00000560269 ILDR1Q86SU0 546 aaPredicted RBP17.99■□□□□ 0.47
HMBOX1-213ENST00000560269 CDCA7Q9BWT1 371 aaPredicted RBP17.99■□□□□ 0.47
HMBOX1-213ENST00000560269 TRPC5Q9UL62 973 aaPredicted RBP17.99■□□□□ 0.47
HMBOX1-213ENST00000560269 CCDC9Q9Y3X0 531 aaKnown RBP17.99■□□□□ 0.47
HMBOX1-213ENST00000560269 GLI3P10071 1580 aa17.99■□□□□ 0.47
HMBOX1-213ENST00000560269 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
HMBOX1-213ENST00000560269 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
HMBOX1-213ENST00000560269 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
HMBOX1-213ENST00000560269 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
HMBOX1-213ENST00000560269 RIPK4P57078 832 aa17.97■□□□□ 0.47
HMBOX1-213ENST00000560269 SPG7Q9UQ90 795 aa17.97■□□□□ 0.47
HMBOX1-213ENST00000560269 RRP7AQ9Y3A4 280 aaKnown RBP17.97■□□□□ 0.47
HMBOX1-213ENST00000560269 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
HMBOX1-213ENST00000560269 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
HMBOX1-213ENST00000560269 ZNF772Q68DY9 489 aaPredicted RBP17.96■□□□□ 0.47
HMBOX1-213ENST00000560269 GJD4Q96KN9 370 aaPredicted RBP17.96■□□□□ 0.47
HMBOX1-213ENST00000560269 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
HMBOX1-213ENST00000560269 ZCRB1Q8TBF4 217 aaKnown RBP17.95■□□□□ 0.46
HMBOX1-213ENST00000560269 QTRT2Q9H974 415 aaKnown RBP17.95■□□□□ 0.46
HMBOX1-213ENST00000560269 TRIM35Q9UPQ4 493 aa17.95■□□□□ 0.46
HMBOX1-213ENST00000560269 ZNF521Q96K83 1311 aa17.95■□□□□ 0.46
HMBOX1-213ENST00000560269 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
HMBOX1-213ENST00000560269 MAP3K5Q99683 1374 aa17.94■□□□□ 0.46
HMBOX1-213ENST00000560269 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
HMBOX1-213ENST00000560269 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
HMBOX1-213ENST00000560269 ZNF530Q6P9A1 599 aaPredicted RBP17.94■□□□□ 0.46
HMBOX1-213ENST00000560269 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
HMBOX1-213ENST00000560269 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
HMBOX1-213ENST00000560269 TNS2Q63HR2 1409 aa17.93■□□□□ 0.46
HMBOX1-213ENST00000560269 GNAT3A8MTJ3 354 aa17.93■□□□□ 0.46
HMBOX1-213ENST00000560269 AKAP4Q5JQC9 854 aa17.93■□□□□ 0.46
HMBOX1-213ENST00000560269 WWC1Q8IX03 1113 aa17.93■□□□□ 0.46
HMBOX1-213ENST00000560269 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
HMBOX1-213ENST00000560269 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
HMBOX1-213ENST00000560269 ONECUT3O60422 494 aaPredicted RBP17.92■□□□□ 0.46
HMBOX1-213ENST00000560269 FAM98CQ17RN3 349 aaKnown RBP17.92■□□□□ 0.46
HMBOX1-213ENST00000560269 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
HMBOX1-213ENST00000560269 EXOC5O00471 708 aa17.91■□□□□ 0.46
HMBOX1-213ENST00000560269 CYP27B1O15528 508 aa17.91■□□□□ 0.46
HMBOX1-213ENST00000560269 PHKG2P15735 406 aa17.91■□□□□ 0.46
HMBOX1-213ENST00000560269 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
HMBOX1-213ENST00000560269 IFNL2Q8IZJ0 200 aa17.91■□□□□ 0.46
HMBOX1-213ENST00000560269 WDR63Q8IWG1 891 aa17.9■□□□□ 0.46
HMBOX1-213ENST00000560269 SCN11AQ9UI33 1791 aa17.89■□□□□ 0.45
HMBOX1-213ENST00000560269 DDB1Q16531 1140 aa17.89■□□□□ 0.45
HMBOX1-213ENST00000560269 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
HMBOX1-213ENST00000560269 RGS17Q9UGC6 210 aaPredicted RBP17.89■□□□□ 0.45
HMBOX1-213ENST00000560269 RBM6P78332 1123 aaKnown RBP17.88■□□□□ 0.45
HMBOX1-213ENST00000560269 NKX1-1Q15270 411 aaPredicted RBP17.88■□□□□ 0.45
HMBOX1-213ENST00000560269 CEMIPQ8WUJ3 1361 aa17.88■□□□□ 0.45
HMBOX1-213ENST00000560269 HSP90AB1P08238 724 aaKnown RBP17.87■□□□□ 0.45
HMBOX1-213ENST00000560269 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
HMBOX1-213ENST00000560269 DCTN1Q14203 1278 aa17.87■□□□□ 0.45
HMBOX1-213ENST00000560269 IL17REQ8NFR9 667 aa17.87■□□□□ 0.45
HMBOX1-213ENST00000560269 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
HMBOX1-213ENST00000560269 CALD1Q05682 793 aaKnown RBP17.86■□□□□ 0.45
HMBOX1-213ENST00000560269 GOLGA2Q08379 1002 aa17.86■□□□□ 0.45
HMBOX1-213ENST00000560269 MCM10Q7L590 875 aa17.86■□□□□ 0.45
HMBOX1-213ENST00000560269 DDX54Q8TDD1 881 aaKnown RBP17.86■□□□□ 0.45
HMBOX1-213ENST00000560269 IL16Q14005 1332 aa17.86■□□□□ 0.45
HMBOX1-213ENST00000560269 KDM6AO15550 1401 aaPredicted RBP17.86■□□□□ 0.45
HMBOX1-213ENST00000560269 MPRIPQ6WCQ1 1025 aa17.85■□□□□ 0.45
HMBOX1-213ENST00000560269 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
HMBOX1-213ENST00000560269 THUMPD2Q9BTF0 503 aaKnown RBP17.85■□□□□ 0.45
HMBOX1-213ENST00000560269 LGR6Q9HBX8 967 aa17.85■□□□□ 0.45
HMBOX1-213ENST00000560269 SIPA1L3O60292 1781 aaPredicted RBP17.84■□□□□ 0.45
HMBOX1-213ENST00000560269 TOGARAM1Q9Y4F4 1720 aa17.84■□□□□ 0.45
HMBOX1-213ENST00000560269 MRC1P22897 1456 aa17.83■□□□□ 0.45
HMBOX1-213ENST00000560269 POTEAQ6S8J7 498 aa17.83■□□□□ 0.44
HMBOX1-213ENST00000560269 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
HMBOX1-213ENST00000560269 MARCH10Q8NA82 808 aaPredicted RBP17.83■□□□□ 0.44
HMBOX1-213ENST00000560269 A0A0G2JS52 829 aa17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 ZNF853P0CG23 659 aa17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 RXRBP28702 533 aa17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 MYT1Q01538 1121 aa17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 SLFN5Q08AF3 891 aa17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 TRMT2AQ8IZ69 625 aaKnown RBP17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 BRWD3Q6RI45 1802 aa17.82■□□□□ 0.44
HMBOX1-213ENST00000560269 E9PSI1 815 aa17.81■□□□□ 0.44
HMBOX1-213ENST00000560269 IFT57Q9NWB7 429 aa17.81■□□□□ 0.44
HMBOX1-213ENST00000560269 ERVV-2B6SEH9 535 aa17.8■□□□□ 0.44
HMBOX1-213ENST00000560269 GNAI1P63096 354 aa17.8■□□□□ 0.44
HMBOX1-213ENST00000560269 CFAP44Q96MT7 982 aa17.8■□□□□ 0.44
HMBOX1-213ENST00000560269 DOT1LQ8TEK3 1739 aa17.79■□□□□ 0.44
HMBOX1-213ENST00000560269 TEFQ10587 303 aa17.79■□□□□ 0.44
HMBOX1-213ENST00000560269 SLC52A2Q9HAB3 445 aa17.79■□□□□ 0.44
HMBOX1-213ENST00000560269 BABAM1Q9NWV8 329 aa17.79■□□□□ 0.44
HMBOX1-213ENST00000560269 BCL9O00512 1426 aa17.79■□□□□ 0.44
HMBOX1-213ENST00000560269 ITGB4P16144 1822 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms