RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 MAP2P11137 1827 aaKnown RBP32.04■■■□□ 2.72
CRNDE-209ENST00000560208 SHANK3Q9BYB0 1731 aa32.02■■■□□ 2.72
CRNDE-209ENST00000560208 RAPGEF4Q8WZA2 1011 aa32.01■■■□□ 2.71
CRNDE-209ENST00000560208 PPM1GO15355 546 aaPredicted RBP32■■■□□ 2.71
CRNDE-209ENST00000560208 ANKRD26Q9UPS8 1709 aa31.98■■■□□ 2.71
CRNDE-209ENST00000560208 PANK3Q9H999 370 aa31.98■■■□□ 2.71
CRNDE-209ENST00000560208 SPON1Q9HCB6 807 aa31.98■■■□□ 2.71
CRNDE-209ENST00000560208 STK32BQ9NY57 414 aa31.98■■■□□ 2.71
CRNDE-209ENST00000560208 TATP17735 454 aaPredicted RBP31.97■■■□□ 2.71
CRNDE-209ENST00000560208 CASZ1Q86V15 1759 aa31.95■■■□□ 2.71
CRNDE-209ENST00000560208 PRIM1P49642 420 aaKnown RBP31.95■■■□□ 2.71
CRNDE-209ENST00000560208 SLC15A2Q16348 729 aa31.95■■■□□ 2.71
CRNDE-209ENST00000560208 DOT1LQ8TEK3 1739 aa31.95■■■□□ 2.7
CRNDE-209ENST00000560208 SYTL4Q96C24 671 aaPredicted RBP31.94■■■□□ 2.7
CRNDE-209ENST00000560208 WASHC2AQ641Q2 1341 aa31.94■■■□□ 2.7
CRNDE-209ENST00000560208 POLKQ9UBT6 870 aa31.93■■■□□ 2.7
CRNDE-209ENST00000560208 PDGFDQ9GZP0 370 aaPredicted RBP31.92■■■□□ 2.7
CRNDE-209ENST00000560208 TNNT2P45379 298 aaPredicted RBP31.91■■■□□ 2.7
CRNDE-209ENST00000560208 LRRC4BQ9NT99 713 aa31.88■■■□□ 2.69
CRNDE-209ENST00000560208 PAPPAQ13219 1627 aa31.87■■■□□ 2.69
CRNDE-209ENST00000560208 PPP1R1BQ9UD71 204 aaPredicted RBP31.87■■■□□ 2.69
CRNDE-209ENST00000560208 NSD2O96028 1365 aa31.86■■■□□ 2.69
CRNDE-209ENST00000560208 PCDH11XQ9BZA7 1347 aa31.86■■■□□ 2.69
CRNDE-209ENST00000560208 PCDH11YQ9BZA8 1340 aa31.86■■■□□ 2.69
CRNDE-209ENST00000560208 NCAPD2Q15021 1401 aa31.85■■■□□ 2.69
CRNDE-209ENST00000560208 ZBTB7AO95365 584 aa31.85■■■□□ 2.69
CRNDE-209ENST00000560208 SLC27A3Q5K4L6 730 aa31.84■■■□□ 2.69
CRNDE-209ENST00000560208 EYA1Q99502 592 aa31.84■■■□□ 2.69
CRNDE-209ENST00000560208 LY75O60449 1722 aa31.82■■■□□ 2.68
CRNDE-209ENST00000560208 PKD1L3Q7Z443 1732 aa31.82■■■□□ 2.68
CRNDE-209ENST00000560208 CYP27B1O15528 508 aa31.81■■■□□ 2.68
CRNDE-209ENST00000560208 ZNF827Q17R98 1081 aa31.8■■■□□ 2.68
CRNDE-209ENST00000560208 ATF5Q9Y2D1 282 aaPredicted RBP31.8■■■□□ 2.68
CRNDE-209ENST00000560208 EIF4A2Q14240 407 aaKnown RBP31.79■■■□□ 2.68
CRNDE-209ENST00000560208 KNSTRNQ9Y448 316 aa31.79■■■□□ 2.68
CRNDE-209ENST00000560208 KIF7Q2M1P5 1343 aa31.78■■■□□ 2.68
CRNDE-209ENST00000560208 KCNQ4P56696 695 aa31.78■■■□□ 2.68
CRNDE-209ENST00000560208 MORC1Q86VD1 984 aa31.78■■■□□ 2.68
CRNDE-209ENST00000560208 SPG7Q9UQ90 795 aa31.77■■■□□ 2.68
CRNDE-209ENST00000560208 AKT1S1Q96B36 256 aa31.76■■■□□ 2.67
CRNDE-209ENST00000560208 ZEB1P37275 1124 aaPredicted RBP31.75■■■□□ 2.67
CRNDE-209ENST00000560208 PTGER2P43116 358 aa31.75■■■□□ 2.67
CRNDE-209ENST00000560208 MTFR1LQ9H019 292 aa31.75■■■□□ 2.67
CRNDE-209ENST00000560208 ITGB4P16144 1822 aa31.75■■■□□ 2.67
CRNDE-209ENST00000560208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.73■■■□□ 2.67
CRNDE-209ENST00000560208 CCNL1Q9UK58 526 aaPredicted RBP31.73■■■□□ 2.67
CRNDE-209ENST00000560208 MPRIPQ6WCQ1 1025 aa31.72■■■□□ 2.67
CRNDE-209ENST00000560208 QSER1Q2KHR3 1735 aa31.72■■■□□ 2.67
CRNDE-209ENST00000560208 TOGARAM1Q9Y4F4 1720 aa31.72■■■□□ 2.67
CRNDE-209ENST00000560208 NKX1-1Q15270 411 aaPredicted RBP31.7■■■□□ 2.67
CRNDE-209ENST00000560208 TFCP2L1Q9NZI6 479 aa31.69■■■□□ 2.66
CRNDE-209ENST00000560208 TUBGCP6Q96RT7 1819 aa31.68■■■□□ 2.66
CRNDE-209ENST00000560208 AMER1Q5JTC6 1135 aaPredicted RBP31.68■■■□□ 2.66
CRNDE-209ENST00000560208 IGSF1Q8N6C5 1336 aa31.68■■■□□ 2.66
CRNDE-209ENST00000560208 SGIP1Q9BQI5 828 aa31.67■■■□□ 2.66
CRNDE-209ENST00000560208 IFNL2Q8IZJ0 200 aa31.65■■■□□ 2.66
CRNDE-209ENST00000560208 PNPLA7Q6ZV29 1317 aa31.65■■■□□ 2.66
CRNDE-209ENST00000560208 PHKG2P15735 406 aa31.64■■■□□ 2.66
CRNDE-209ENST00000560208 PALLDQ8WX93 1383 aa31.64■■■□□ 2.66
CRNDE-209ENST00000560208 SLC16A10Q8TF71 515 aa31.63■■■□□ 2.65
CRNDE-209ENST00000560208 PIGBQ92521 554 aa31.63■■■□□ 2.65
CRNDE-209ENST00000560208 SMARCC1Q92922 1105 aaPredicted RBP31.63■■■□□ 2.65
CRNDE-209ENST00000560208 PLEKHG2Q9H7P9 1386 aa31.62■■■□□ 2.65
CRNDE-209ENST00000560208 PER1O15534 1290 aaPredicted RBP31.61■■■□□ 2.65
CRNDE-209ENST00000560208 TAF1LQ8IZX4 1826 aa31.61■■■□□ 2.65
CRNDE-209ENST00000560208 C5P01031 1676 aa31.6■■■□□ 2.65
CRNDE-209ENST00000560208 DCAF8L1A6NGE4 600 aa31.59■■■□□ 2.65
CRNDE-209ENST00000560208 FHDC1Q9C0D6 1143 aaPredicted RBP31.59■■■□□ 2.65
CRNDE-209ENST00000560208 HMGB2P26583 209 aaKnown RBP31.58■■■□□ 2.65
CRNDE-209ENST00000560208 ARXQ96QS3 562 aa31.58■■■□□ 2.65
CRNDE-209ENST00000560208 TMOD3Q9NYL9 352 aa31.58■■■□□ 2.65
CRNDE-209ENST00000560208 PLEKHO1Q53GL0 409 aaPredicted RBP31.57■■■□□ 2.64
CRNDE-209ENST00000560208 SYT17Q9BSW7 474 aa31.56■■■□□ 2.64
CRNDE-209ENST00000560208 AEBP1Q8IUX7 1158 aa31.55■■■□□ 2.64
CRNDE-209ENST00000560208 COL24A1Q17RW2 1714 aa31.55■■■□□ 2.64
CRNDE-209ENST00000560208 IL13P35225 146 aa31.54■■■□□ 2.64
CRNDE-209ENST00000560208 CC2D1BQ5T0F9 858 aaKnown RBP31.54■■■□□ 2.64
CRNDE-209ENST00000560208 MSH5O43196 834 aa31.53■■■□□ 2.64
CRNDE-209ENST00000560208 MTHFSP49914 203 aa31.53■■■□□ 2.64
CRNDE-209ENST00000560208 AMOTQ4VCS5 1084 aa31.53■■■□□ 2.64
CRNDE-209ENST00000560208 COL23A1Q86Y22 540 aaPredicted RBP31.53■■■□□ 2.64
CRNDE-209ENST00000560208 POLD1P28340 1107 aa31.52■■■□□ 2.64
CRNDE-209ENST00000560208 SULT6B1Q6IMI4 303 aa31.52■■■□□ 2.64
CRNDE-209ENST00000560208 ASAP1Q9ULH1 1129 aa31.52■■■□□ 2.64
CRNDE-209ENST00000560208 ZNF530Q6P9A1 599 aaPredicted RBP31.51■■■□□ 2.63
CRNDE-209ENST00000560208 LOC102724428A0A0B4J2F2 783 aa31.5■■■□□ 2.63
CRNDE-209ENST00000560208 HSP90AB1P08238 724 aaKnown RBP31.5■■■□□ 2.63
CRNDE-209ENST00000560208 SIK1P57059 783 aa31.5■■■□□ 2.63
CRNDE-209ENST00000560208 C4BP0C0L5 1744 aa31.49■■■□□ 2.63
CRNDE-209ENST00000560208 ERVV-2B6SEH9 535 aa31.49■■■□□ 2.63
CRNDE-209ENST00000560208 DCAF5Q96JK2 942 aa31.49■■■□□ 2.63
CRNDE-209ENST00000560208 KDRP35968 1356 aa31.48■■■□□ 2.63
CRNDE-209ENST00000560208 FLAD1Q8NFF5 587 aa31.47■■■□□ 2.63
CRNDE-209ENST00000560208 MAP3K5Q99683 1374 aa31.46■■■□□ 2.63
CRNDE-209ENST00000560208 AK7Q96M32 723 aa31.46■■■□□ 2.63
CRNDE-209ENST00000560208 ATG3Q9NT62 314 aa31.46■■■□□ 2.63
CRNDE-209ENST00000560208 NPC1L1Q9UHC9 1359 aa31.44■■■□□ 2.62
CRNDE-209ENST00000560208 CNGB1Q14028 1251 aaPredicted RBP31.44■■■□□ 2.62
CRNDE-209ENST00000560208 C1orf141Q5JVX7 400 aa31.44■■■□□ 2.62
CRNDE-209ENST00000560208 UBR3Q6ZT12 1888 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms