RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
RORA-212ENST00000560004 PLEKHF1Q96S99 279 aa15.25■□□□□ 0.03
RORA-212ENST00000560004 QTRT2Q9H974 415 aaKnown RBP15.25■□□□□ 0.03
RORA-212ENST00000560004 RGS12O14924 1447 aa15.25■□□□□ 0.03
RORA-212ENST00000560004 PRKAR2BP31323 418 aa15.24■□□□□ 0.03
RORA-212ENST00000560004 CCDC9Q9Y3X0 531 aaKnown RBP15.24■□□□□ 0.03
RORA-212ENST00000560004 ADAMTS7Q9UKP4 1686 aa15.24■□□□□ 0.03
RORA-212ENST00000560004 TOGARAM1Q9Y4F4 1720 aa15.23■□□□□ 0.03
RORA-212ENST00000560004 IL2RBP14784 551 aa15.23■□□□□ 0.03
RORA-212ENST00000560004 FAM98CQ17RN3 349 aaKnown RBP15.23■□□□□ 0.03
RORA-212ENST00000560004 FCHSD2O94868 740 aa15.22■□□□□ 0.03
RORA-212ENST00000560004 ONECUT3O60422 494 aaPredicted RBP15.21■□□□□ 0.03
RORA-212ENST00000560004 TATP17735 454 aaPredicted RBP15.21■□□□□ 0.03
RORA-212ENST00000560004 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
RORA-212ENST00000560004 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.03
RORA-212ENST00000560004 PHACTR3Q96KR7 559 aa15.21■□□□□ 0.03
RORA-212ENST00000560004 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
RORA-212ENST00000560004 RAPGEF4Q8WZA2 1011 aa15.2■□□□□ 0.02
RORA-212ENST00000560004 DOT1LQ8TEK3 1739 aa15.2■□□□□ 0.02
RORA-212ENST00000560004 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
RORA-212ENST00000560004 CDCA7Q9BWT1 371 aaPredicted RBP15.19■□□□□ 0.02
RORA-212ENST00000560004 RUNDC1Q96C34 613 aa15.18■□□□□ 0.02
RORA-212ENST00000560004 SIPA1L3O60292 1781 aaPredicted RBP15.17■□□□□ 0.02
RORA-212ENST00000560004 RXRBP28702 533 aa15.17■□□□□ 0.02
RORA-212ENST00000560004 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
RORA-212ENST00000560004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.027e-6■■□□□ 12.8
RORA-212ENST00000560004 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
RORA-212ENST00000560004 MRC1P22897 1456 aa15.16■□□□□ 0.02
RORA-212ENST00000560004 CYP27B1O15528 508 aa15.16■□□□□ 0.02
RORA-212ENST00000560004 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
RORA-212ENST00000560004 PCDH11XQ9BZA7 1347 aa15.16■□□□□ 0.02
RORA-212ENST00000560004 PCDH11YQ9BZA8 1340 aa15.16■□□□□ 0.02
RORA-212ENST00000560004 SBF2Q86WG5 1849 aa15.15■□□□□ 0.02
RORA-212ENST00000560004 AMOTQ4VCS5 1084 aa15.15■□□□□ 0.02
RORA-212ENST00000560004 ZCRB1Q8TBF4 217 aaKnown RBP15.15■□□□□ 0.02
RORA-212ENST00000560004 MAPK8IP3Q9UPT6 1336 aa15.15■□□□□ 0.02
RORA-212ENST00000560004 MAP3K5Q99683 1374 aa15.14■□□□□ 0.01
RORA-212ENST00000560004 NHSQ6T4R5 1651 aa15.14■□□□□ 0.01
RORA-212ENST00000560004 PHKG2P15735 406 aa15.14■□□□□ 0.01
RORA-212ENST00000560004 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
RORA-212ENST00000560004 DDB1Q16531 1140 aa15.14■□□□□ 0.01
RORA-212ENST00000560004 PLEKHO1Q53GL0 409 aaPredicted RBP15.14■□□□□ 0.01
RORA-212ENST00000560004 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
RORA-212ENST00000560004 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
RORA-212ENST00000560004 ITGB4P16144 1822 aa15.14■□□□□ 0.01
RORA-212ENST00000560004 APAF1O14727 1248 aa15.13■□□□□ 0.01
RORA-212ENST00000560004 TMPOP42166 694 aaKnown RBP15.13■□□□□ 0.01
RORA-212ENST00000560004 MARCH10Q8NA82 808 aaPredicted RBP15.13■□□□□ 0.01
RORA-212ENST00000560004 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
RORA-212ENST00000560004 SPG7Q9UQ90 795 aa15.13■□□□□ 0.01
RORA-212ENST00000560004 PAPPAQ13219 1627 aa15.13■□□□□ 0.01
RORA-212ENST00000560004 BCL9O00512 1426 aa15.12■□□□□ 0.01
RORA-212ENST00000560004 SENP3-EIF4A1A0A087X0R7 540 aa15.12■□□□□ 0.01
RORA-212ENST00000560004 A0A0G2JS52 829 aa15.12■□□□□ 0.01
RORA-212ENST00000560004 MYT1Q01538 1121 aa15.12■□□□□ 0.01
RORA-212ENST00000560004 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
RORA-212ENST00000560004 EP400Q96L91 3159 aa15.12■□□□□ 0.01
RORA-212ENST00000560004 EXOC5O00471 708 aa15.11■□□□□ 0.01
RORA-212ENST00000560004 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
RORA-212ENST00000560004 CEMIPQ8WUJ3 1361 aa15.11■□□□□ 0.01
RORA-212ENST00000560004 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
RORA-212ENST00000560004 IFNL2Q8IZJ0 200 aa15.1■□□□□ 0.01
RORA-212ENST00000560004 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
RORA-212ENST00000560004 TNS1Q9HBL0 1735 aaKnown RBP15.09■□□□□ 0.01
RORA-212ENST00000560004 NEFMP07197 916 aa15.09■□□□□ 0.01
RORA-212ENST00000560004 DDX54Q8TDD1 881 aaKnown RBP15.09■□□□□ 0.01
RORA-212ENST00000560004 KDM3BQ7LBC6 1761 aa15.08■□□□□ 0.01
RORA-212ENST00000560004 RIPK4P57078 832 aa15.08■□□□□ 0
RORA-212ENST00000560004 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
RORA-212ENST00000560004 KRT27Q7Z3Y8 459 aa15.08■□□□□ 0
RORA-212ENST00000560004 BTAF1O14981 1849 aa15.08■□□□□ 0
RORA-212ENST00000560004 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
RORA-212ENST00000560004 DCTN1Q14203 1278 aa15.07■□□□□ 0
RORA-212ENST00000560004 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
RORA-212ENST00000560004 FAM182BQ5T319 152 aa15.07■□□□□ 0
RORA-212ENST00000560004 ZNF521Q96K83 1311 aa15.07■□□□□ 0
RORA-212ENST00000560004 UBR2Q8IWV8 1755 aa15.06■□□□□ 0
RORA-212ENST00000560004 RNMTO43148 476 aaKnown RBP15.06■□□□□ 0
RORA-212ENST00000560004 PDE3BQ13370 1112 aa15.06■□□□□ 0
RORA-212ENST00000560004 NEUROD2Q15784 382 aa15.06■□□□□ 0
RORA-212ENST00000560004 CCDC27Q2M243 656 aa15.06■□□□□ 0
RORA-212ENST00000560004 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
RORA-212ENST00000560004 MCM10Q7L590 875 aa15.06■□□□□ 0
RORA-212ENST00000560004 IL17REQ8NFR9 667 aa15.06■□□□□ 0
RORA-212ENST00000560004 LGR6Q9HBX8 967 aa15.06■□□□□ 0
RORA-212ENST00000560004 HTATSF1O43719 755 aaKnown RBP15.05■□□□□ -0
RORA-212ENST00000560004 DCAF5Q96JK2 942 aa15.05■□□□□ -0
RORA-212ENST00000560004 THUMPD2Q9BTF0 503 aaKnown RBP15.05■□□□□ -0
RORA-212ENST00000560004 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
RORA-212ENST00000560004 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
RORA-212ENST00000560004 LMOD3Q0VAK6 560 aa15.03■□□□□ -0
RORA-212ENST00000560004 WWC1Q8IX03 1113 aa15.03■□□□□ -0
RORA-212ENST00000560004 SALL2Q9Y467 1007 aaPredicted RBP15.03■□□□□ -0
RORA-212ENST00000560004 KCPQ6ZWJ8 1503 aa15.02□□□□□ -0.01
RORA-212ENST00000560004 PTF1AQ7RTS3 328 aa15.01□□□□□ -0.01
RORA-212ENST00000560004 NGEFQ8N5V2 710 aa15.01□□□□□ -0.01
RORA-212ENST00000560004 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
RORA-212ENST00000560004 ACSBG1Q96GR2 724 aa15.01□□□□□ -0.01
RORA-212ENST00000560004 SLC52A2Q9HAB3 445 aa15.01□□□□□ -0.01
RORA-212ENST00000560004 CICQ96RK0 1608 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms