RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 C14orf93Q9H972 538 aaKnown RBP7.38□□□□□ -1.23
SPG11-220ENST00000559933 WBP1LQ9NX94 342 aa7.38□□□□□ -1.23
SPG11-220ENST00000559933 EID1Q9Y6B2 187 aa7.38□□□□□ -1.23
SPG11-220ENST00000559933 PLEKHH1Q9ULM0 1364 aa7.37□□□□□ -1.23
SPG11-220ENST00000559933 TULP1O00294 542 aaPredicted RBP7.37□□□□□ -1.23
SPG11-220ENST00000559933 PTGDRQ13258 359 aa7.37□□□□□ -1.23
SPG11-220ENST00000559933 TRAK1Q9UPV9 953 aa7.37□□□□□ -1.23
SPG11-220ENST00000559933 QRICH2Q9H0J4 1663 aa7.37□□□□□ -1.23
SPG11-220ENST00000559933 YTHDC2Q9H6S0 1430 aaKnown RBP7.36□□□□□ -1.23
SPG11-220ENST00000559933 KNDC1Q76NI1 1749 aa7.36□□□□□ -1.23
SPG11-220ENST00000559933 SAFB2Q14151 953 aaKnown RBP eCLIP7.36□□□□□ -1.23
SPG11-220ENST00000559933 ANKLE2Q86XL3 938 aa7.36□□□□□ -1.23
SPG11-220ENST00000559933 TTC13Q8NBP0 860 aa7.36□□□□□ -1.23
SPG11-220ENST00000559933 DIP2AQ14689 1571 aa7.36□□□□□ -1.23
SPG11-220ENST00000559933 STRCP1A6NGW2 1772 aa7.36□□□□□ -1.23
SPG11-220ENST00000559933 XRN1Q8IZH2 1706 aaKnown RBP7.35□□□□□ -1.23
SPG11-220ENST00000559933 ST20-MTHFSA0A0A6YYL1 179 aa7.35□□□□□ -1.23
SPG11-220ENST00000559933 TESPA1A2RU30 521 aaPredicted RBP7.35□□□□□ -1.23
SPG11-220ENST00000559933 C11orf95C9JLR9 678 aaPredicted RBP7.35□□□□□ -1.23
SPG11-220ENST00000559933 EIF4G2P78344 907 aaKnown RBP eCLIP7.35□□□□□ -1.23
SPG11-220ENST00000559933 RBM46Q8TBY0 533 aaKnown RBP7.35□□□□□ -1.23
SPG11-220ENST00000559933 CPS1P31327 1500 aa7.35□□□□□ -1.23
SPG11-220ENST00000559933 LRPPRCP42704 1394 aaKnown RBP7.34□□□□□ -1.23
SPG11-220ENST00000559933 ROBO2Q9HCK4 1378 aa7.34□□□□□ -1.23
SPG11-220ENST00000559933 IFFO2Q5TF58 517 aa7.34□□□□□ -1.23
SPG11-220ENST00000559933 WAPLQ7Z5K2 1190 aa7.34□□□□□ -1.23
SPG11-220ENST00000559933 SLF2Q8IX21 1173 aa7.34□□□□□ -1.23
SPG11-220ENST00000559933 TULP4Q9NRJ4 1543 aa7.33□□□□□ -1.24
SPG11-220ENST00000559933 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.33□□□□□ -1.24
SPG11-220ENST00000559933 C3orf80F5H4A9 247 aa7.33□□□□□ -1.24
SPG11-220ENST00000559933 KCNA6P17658 529 aa7.33□□□□□ -1.24
SPG11-220ENST00000559933 KCNC4Q03721 635 aa7.33□□□□□ -1.24
SPG11-220ENST00000559933 PRAM1Q96QH2 718 aa7.33□□□□□ -1.24
SPG11-220ENST00000559933 CHD2O14647 1828 aaKnown RBP7.33□□□□□ -1.24
SPG11-220ENST00000559933 NWD1Q149M9 1564 aa7.33□□□□□ -1.24
SPG11-220ENST00000559933 MINK1Q8N4C8 1332 aaPredicted RBP7.32□□□□□ -1.24
SPG11-220ENST00000559933 SWT1Q5T5J6 900 aaKnown RBP7.32□□□□□ -1.24
SPG11-220ENST00000559933 RBM26Q5T8P6 1007 aaKnown RBP7.32□□□□□ -1.24
SPG11-220ENST00000559933 TESK2Q96S53 571 aa7.32□□□□□ -1.24
SPG11-220ENST00000559933 TBX22Q9Y458 520 aa7.32□□□□□ -1.24
SPG11-220ENST00000559933 TECPR2O15040 1411 aa7.32□□□□□ -1.24
SPG11-220ENST00000559933 NALCNQ8IZF0 1738 aa7.32□□□□□ -1.24
SPG11-220ENST00000559933 DLC1Q96QB1 1528 aa7.32□□□□□ -1.24
SPG11-220ENST00000559933 WASHC2AQ641Q2 1341 aa7.31□□□□□ -1.24
SPG11-220ENST00000559933 ZNF335Q9H4Z2 1342 aaPredicted RBP7.31□□□□□ -1.24
SPG11-220ENST00000559933 CENPJQ9HC77 1338 aaPredicted RBP7.31□□□□□ -1.24
SPG11-220ENST00000559933 ITGBL1O95965 494 aaPredicted RBP7.31□□□□□ -1.24
SPG11-220ENST00000559933 DNAJB2P25686 324 aa7.31□□□□□ -1.24
SPG11-220ENST00000559933 PTCH1Q13635 1447 aa7.31□□□□□ -1.24
SPG11-220ENST00000559933 HIC1Q14526 733 aa7.31□□□□□ -1.24
SPG11-220ENST00000559933 EYA1Q99502 592 aa7.31□□□□□ -1.24
SPG11-220ENST00000559933 POLR3GLQ9BT43 218 aa7.31□□□□□ -1.24
SPG11-220ENST00000559933 AMOTL2Q9Y2J4 779 aa7.31□□□□□ -1.24
SPG11-220ENST00000559933 EIF3AQ14152 1382 aaKnown RBP7.31□□□□□ -1.24
SPG11-220ENST00000559933 KIF7Q2M1P5 1343 aa7.3□□□□□ -1.24
SPG11-220ENST00000559933 ADGRG1Q9Y653 693 aa7.3□□□□□ -1.24
SPG11-220ENST00000559933 MYOM1P52179 1685 aa7.3□□□□□ -1.24
SPG11-220ENST00000559933 ABCC11Q96J66 1382 aa7.3□□□□□ -1.24
SPG11-220ENST00000559933 XIRP1Q702N8 1843 aaKnown RBP7.29□□□□□ -1.24
SPG11-220ENST00000559933 OATP04181 439 aa7.29□□□□□ -1.24
SPG11-220ENST00000559933 PRR14Q9BWN1 585 aa7.29□□□□□ -1.24
SPG11-220ENST00000559933 POGKQ9P215 609 aa7.29□□□□□ -1.24
SPG11-220ENST00000559933 CCDC7Q96M83 1385 aa7.29□□□□□ -1.24
SPG11-220ENST00000559933 A0A0G2JS52 829 aa7.28□□□□□ -1.24
SPG11-220ENST00000559933 GPIHBP1Q8IV16 184 aa7.28□□□□□ -1.24
SPG11-220ENST00000559933 ADGRB2O60241 1585 aa7.28□□□□□ -1.24
SPG11-220ENST00000559933 FAM135BQ49AJ0 1406 aa7.27□□□□□ -1.24
SPG11-220ENST00000559933 USP32Q8NFA0 1604 aa7.27□□□□□ -1.25
SPG11-220ENST00000559933 GNPATO15228 680 aa7.27□□□□□ -1.25
SPG11-220ENST00000559933 RGS20O76081 388 aa7.27□□□□□ -1.25
SPG11-220ENST00000559933 PIK3R4Q99570 1358 aa7.27□□□□□ -1.25
SPG11-220ENST00000559933 NKTRP30414 1462 aaKnown RBP7.27□□□□□ -1.25
SPG11-220ENST00000559933 SBNO2Q9Y2G9 1366 aa7.26□□□□□ -1.25
SPG11-220ENST00000559933 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.26□□□□□ -1.25
SPG11-220ENST00000559933 RCCD1A6NED2 376 aa7.26□□□□□ -1.25
SPG11-220ENST00000559933 DDX10Q13206 875 aaKnown RBP7.26□□□□□ -1.25
SPG11-220ENST00000559933 FAM161AQ3B820 660 aa7.26□□□□□ -1.25
SPG11-220ENST00000559933 IL21Q9HBE4 155 aa7.26□□□□□ -1.25
SPG11-220ENST00000559933 LRRC7Q96NW7 1537 aa7.26□□□□□ -1.25
SPG11-220ENST00000559933 PRR36Q9H6K5 1346 aa7.26□□□□□ -1.25
SPG11-220ENST00000559933 TOPAZ1Q8N9V7 1692 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 ATP7BP35670 1465 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 TMEM94Q12767 1356 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 FMN2Q9NZ56 1722 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 TMF1P82094 1093 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 CNGB1Q14028 1251 aaPredicted RBP7.25□□□□□ -1.25
SPG11-220ENST00000559933 MTRQ99707 1265 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 TMEM134Q9H6X4 195 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 RGPD8O14715 1765 aaPredicted RBP7.25□□□□□ -1.25
SPG11-220ENST00000559933 ADGRL3Q9HAR2 1447 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 CDC42BPGQ6DT37 1551 aa7.25□□□□□ -1.25
SPG11-220ENST00000559933 LTBP4Q8N2S1 1624 aa7.24□□□□□ -1.25
SPG11-220ENST00000559933 APLP1P51693 650 aa7.24□□□□□ -1.25
SPG11-220ENST00000559933 SRPK2P78362 688 aaKnown RBP7.24□□□□□ -1.25
SPG11-220ENST00000559933 KMT5BQ4FZB7 885 aa7.24□□□□□ -1.25
SPG11-220ENST00000559933 C14orf37Q86TY3 774 aa7.24□□□□□ -1.25
SPG11-220ENST00000559933 PROSER2Q86WR7 435 aaPredicted RBP7.24□□□□□ -1.25
SPG11-220ENST00000559933 CDK19Q9BWU1 502 aa7.24□□□□□ -1.25
SPG11-220ENST00000559933 EVC2Q86UK5 1308 aa7.24□□□□□ -1.25
SPG11-220ENST00000559933 WASLO00401 505 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms