RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 CDCA7Q9BWT1 371 aaPredicted RBP19.04■□□□□ 0.64
SMAD6-204ENST00000559931 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
SMAD6-204ENST00000559931 CCDC146Q8IYE0 955 aa19.02■□□□□ 0.64
SMAD6-204ENST00000559931 RSPH6AQ9H0K4 717 aa19.02■□□□□ 0.64
SMAD6-204ENST00000559931 EXOC5O00471 708 aa19.01■□□□□ 0.63
SMAD6-204ENST00000559931 KDRP35968 1356 aa19.01■□□□□ 0.63
SMAD6-204ENST00000559931 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
SMAD6-204ENST00000559931 ONECUT3O60422 494 aaPredicted RBP19■□□□□ 0.63
SMAD6-204ENST00000559931 ZCRB1Q8TBF4 217 aaKnown RBP19■□□□□ 0.63
SMAD6-204ENST00000559931 SPG7Q9UQ90 795 aa19■□□□□ 0.63
SMAD6-204ENST00000559931 DDB1Q16531 1140 aa18.99■□□□□ 0.63
SMAD6-204ENST00000559931 RUNDC1Q96C34 613 aa18.99■□□□□ 0.63
SMAD6-204ENST00000559931 NCAPD2Q15021 1401 aa18.99■□□□□ 0.63
SMAD6-204ENST00000559931 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
SMAD6-204ENST00000559931 AMOTQ4VCS5 1084 aa18.98■□□□□ 0.63
SMAD6-204ENST00000559931 DDX54Q8TDD1 881 aaKnown RBP18.98■□□□□ 0.63
SMAD6-204ENST00000559931 PHACTR3Q96KR7 559 aa18.98■□□□□ 0.63
SMAD6-204ENST00000559931 MEGF6O75095 1541 aa18.98■□□□□ 0.63
SMAD6-204ENST00000559931 THSD7AQ9UPZ6 1657 aa18.97■□□□□ 0.63
SMAD6-204ENST00000559931 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
SMAD6-204ENST00000559931 PARP4Q9UKK3 1724 aaKnown RBP18.97■□□□□ 0.63
SMAD6-204ENST00000559931 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
SMAD6-204ENST00000559931 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMAD6-204ENST00000559931 OVOS2A0A0G2JMS6 1433 aa18.95■□□□□ 0.62
SMAD6-204ENST00000559931 DISP2A7MBM2 1401 aa18.95■□□□□ 0.62
SMAD6-204ENST00000559931 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
SMAD6-204ENST00000559931 ZNF530Q6P9A1 599 aaPredicted RBP18.95■□□□□ 0.62
SMAD6-204ENST00000559931 MTHFSDQ2M296 383 aaKnown RBP18.94■□□□□ 0.62
SMAD6-204ENST00000559931 KRT27Q7Z3Y8 459 aa18.94■□□□□ 0.62
SMAD6-204ENST00000559931 GAS2L2Q8NHY3 880 aa18.94■□□□□ 0.62
SMAD6-204ENST00000559931 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
SMAD6-204ENST00000559931 SENP3-EIF4A1A0A087X0R7 540 aa18.93■□□□□ 0.62
SMAD6-204ENST00000559931 SOCS7O14512 581 aa18.93■□□□□ 0.62
SMAD6-204ENST00000559931 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
SMAD6-204ENST00000559931 APAF1O14727 1248 aa18.92■□□□□ 0.62
SMAD6-204ENST00000559931 FAM182BQ5T319 152 aa18.92■□□□□ 0.62
SMAD6-204ENST00000559931 IFNL2Q8IZJ0 200 aa18.92■□□□□ 0.62
SMAD6-204ENST00000559931 RRP7AQ9Y3A4 280 aaKnown RBP18.92■□□□□ 0.62
SMAD6-204ENST00000559931 PCDH11XQ9BZA7 1347 aa18.92■□□□□ 0.62
SMAD6-204ENST00000559931 PCDH11YQ9BZA8 1340 aa18.92■□□□□ 0.62
SMAD6-204ENST00000559931 NFE2L2Q16236 605 aa18.91■□□□□ 0.62
SMAD6-204ENST00000559931 RIPK4P57078 832 aa18.9■□□□□ 0.62
SMAD6-204ENST00000559931 LRRC37A3O60309 1634 aa18.89■□□□□ 0.62
SMAD6-204ENST00000559931 GNAT3A8MTJ3 354 aa18.89■□□□□ 0.61
SMAD6-204ENST00000559931 CYP27B1O15528 508 aa18.89■□□□□ 0.61
SMAD6-204ENST00000559931 TMPOP42166 694 aaKnown RBP18.89■□□□□ 0.61
SMAD6-204ENST00000559931 AKAP4Q5JQC9 854 aa18.89■□□□□ 0.61
SMAD6-204ENST00000559931 RTF1Q92541 710 aaKnown RBP18.89■□□□□ 0.61
SMAD6-204ENST00000559931 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
SMAD6-204ENST00000559931 PLEKHG2Q9H7P9 1386 aa18.89■□□□□ 0.61
SMAD6-204ENST00000559931 TNS2Q63HR2 1409 aa18.89■□□□□ 0.61
SMAD6-204ENST00000559931 EP400Q96L91 3159 aa18.89■□□□□ 0.61
SMAD6-204ENST00000559931 PKD1L3Q7Z443 1732 aa18.88■□□□□ 0.61
SMAD6-204ENST00000559931 PHKG2P15735 406 aa18.88■□□□□ 0.61
SMAD6-204ENST00000559931 MARCH10Q8NA82 808 aaPredicted RBP18.88■□□□□ 0.61
SMAD6-204ENST00000559931 HSP90AB1P08238 724 aaKnown RBP18.87■□□□□ 0.61
SMAD6-204ENST00000559931 MPRIPQ6WCQ1 1025 aa18.87■□□□□ 0.61
SMAD6-204ENST00000559931 MAP3K5Q99683 1374 aa18.85■□□□□ 0.61
SMAD6-204ENST00000559931 UPF1Q92900 1129 aaKnown RBP eCLIP18.85■□□□□ 0.61
SMAD6-204ENST00000559931 DLG5Q8TDM6 1919 aa18.84■□□□□ 0.61
SMAD6-204ENST00000559931 SHANK3Q9BYB0 1731 aa18.84■□□□□ 0.61
SMAD6-204ENST00000559931 LMOD3Q0VAK6 560 aa18.84■□□□□ 0.61
SMAD6-204ENST00000559931 DCAF5Q96JK2 942 aa18.84■□□□□ 0.61
SMAD6-204ENST00000559931 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
SMAD6-204ENST00000559931 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMAD6-204ENST00000559931 DCTN1Q14203 1278 aa18.82■□□□□ 0.6
SMAD6-204ENST00000559931 NKX1-1Q15270 411 aaPredicted RBP18.82■□□□□ 0.6
SMAD6-204ENST00000559931 FAM196AQ6ZSG2 479 aa18.82■□□□□ 0.6
SMAD6-204ENST00000559931 MCM10Q7L590 875 aa18.82■□□□□ 0.6
SMAD6-204ENST00000559931 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
SMAD6-204ENST00000559931 ACSBG1Q96GR2 724 aa18.82■□□□□ 0.6
SMAD6-204ENST00000559931 LGR6Q9HBX8 967 aa18.82■□□□□ 0.6
SMAD6-204ENST00000559931 RNMTO43148 476 aaKnown RBP18.81■□□□□ 0.6
SMAD6-204ENST00000559931 CABP4P57796 275 aa18.8■□□□□ 0.6
SMAD6-204ENST00000559931 TEFQ10587 303 aa18.8■□□□□ 0.6
SMAD6-204ENST00000559931 IL17REQ8NFR9 667 aa18.8■□□□□ 0.6
SMAD6-204ENST00000559931 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
SMAD6-204ENST00000559931 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
SMAD6-204ENST00000559931 THUMPD2Q9BTF0 503 aaKnown RBP18.79■□□□□ 0.6
SMAD6-204ENST00000559931 TRIM35Q9UPQ4 493 aa18.79■□□□□ 0.6
SMAD6-204ENST00000559931 VIRMAQ69YN4 1812 aaKnown RBP18.79■□□□□ 0.6
SMAD6-204ENST00000559931 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
SMAD6-204ENST00000559931 ERVV-2B6SEH9 535 aa18.78■□□□□ 0.6
SMAD6-204ENST00000559931 PRIM1P49642 420 aaKnown RBP18.78■□□□□ 0.6
SMAD6-204ENST00000559931 TRIM37O94972 964 aa18.77■□□□□ 0.6
SMAD6-204ENST00000559931 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
SMAD6-204ENST00000559931 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.6
SMAD6-204ENST00000559931 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
SMAD6-204ENST00000559931 CCDC27Q2M243 656 aa18.76■□□□□ 0.59
SMAD6-204ENST00000559931 WWC1Q8IX03 1113 aa18.76■□□□□ 0.59
SMAD6-204ENST00000559931 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
SMAD6-204ENST00000559931 KDM6AO15550 1401 aaPredicted RBP18.75■□□□□ 0.59
SMAD6-204ENST00000559931 KCNQ2O43526 872 aa18.75■□□□□ 0.59
SMAD6-204ENST00000559931 CALD1Q05682 793 aaKnown RBP18.75■□□□□ 0.59
SMAD6-204ENST00000559931 SF3B2Q13435 895 aaKnown RBP18.75■□□□□ 0.59
SMAD6-204ENST00000559931 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
SMAD6-204ENST00000559931 SLC52A2Q9HAB3 445 aa18.75■□□□□ 0.59
SMAD6-204ENST00000559931 TAF7Q15545 349 aaPredicted RBP18.74■□□□□ 0.59
SMAD6-204ENST00000559931 ITGB4P16144 1822 aa18.73■□□□□ 0.59
SMAD6-204ENST00000559931 DOT1LQ8TEK3 1739 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms