RNA–Protein interactions for RNA: ENST00000559677.5

SPG21-210, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-210ENST00000559677 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
SPG21-210ENST00000559677 SBF2Q86WG5 1849 aa12.59□□□□□ -0.39
SPG21-210ENST00000559677 BCL9O00512 1426 aa12.59□□□□□ -0.39
SPG21-210ENST00000559677 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
SPG21-210ENST00000559677 ABCC6O95255 1503 aa12.58□□□□□ -0.4
SPG21-210ENST00000559677 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
SPG21-210ENST00000559677 PPM1GO15355 546 aaPredicted RBP12.58□□□□□ -0.4
SPG21-210ENST00000559677 PANK3Q9H999 370 aa12.58□□□□□ -0.4
SPG21-210ENST00000559677 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
SPG21-210ENST00000559677 PEAK1Q9H792 1746 aa12.56□□□□□ -0.4
SPG21-210ENST00000559677 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
SPG21-210ENST00000559677 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
SPG21-210ENST00000559677 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
SPG21-210ENST00000559677 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
SPG21-210ENST00000559677 RAPGEF4Q8WZA2 1011 aa12.55□□□□□ -0.4
SPG21-210ENST00000559677 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
SPG21-210ENST00000559677 LRRC37A3O60309 1634 aa12.55□□□□□ -0.4
SPG21-210ENST00000559677 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
SPG21-210ENST00000559677 SYTL4Q96C24 671 aaPredicted RBP12.54□□□□□ -0.4
SPG21-210ENST00000559677 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
SPG21-210ENST00000559677 POLKQ9UBT6 870 aa12.54□□□□□ -0.4
SPG21-210ENST00000559677 INSRP06213 1382 aa12.54□□□□□ -0.4
SPG21-210ENST00000559677 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
SPG21-210ENST00000559677 SRCAPQ6ZRS2 3230 aa12.53□□□□□ -0.4
SPG21-210ENST00000559677 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
SPG21-210ENST00000559677 SLC15A2Q16348 729 aa12.53□□□□□ -0.4
SPG21-210ENST00000559677 SPON1Q9HCB6 807 aa12.53□□□□□ -0.4
SPG21-210ENST00000559677 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
SPG21-210ENST00000559677 RGPD2P0DJD1 1756 aa12.52□□□□□ -0.41
SPG21-210ENST00000559677 WNK3Q9BYP7 1800 aa12.52□□□□□ -0.41
SPG21-210ENST00000559677 RTL1A6NKG5 1358 aa12.52□□□□□ -0.41
SPG21-210ENST00000559677 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.41
SPG21-210ENST00000559677 TNS2Q63HR2 1409 aa12.52□□□□□ -0.41
SPG21-210ENST00000559677 MAP2P11137 1827 aaKnown RBP12.51□□□□□ -0.41
SPG21-210ENST00000559677 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
SPG21-210ENST00000559677 FLT4P35916 1363 aa12.51□□□□□ -0.41
SPG21-210ENST00000559677 EYA1Q99502 592 aa12.5□□□□□ -0.41
SPG21-210ENST00000559677 PDGFDQ9GZP0 370 aaPredicted RBP12.5□□□□□ -0.41
SPG21-210ENST00000559677 KNSTRNQ9Y448 316 aa12.5□□□□□ -0.41
SPG21-210ENST00000559677 RREB1Q92766 1687 aa12.49□□□□□ -0.41
SPG21-210ENST00000559677 SMG6Q86US8 1419 aaKnown RBP12.49□□□□□ -0.41
SPG21-210ENST00000559677 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
SPG21-210ENST00000559677 LRRC4BQ9NT99 713 aa12.49□□□□□ -0.41
SPG21-210ENST00000559677 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
SPG21-210ENST00000559677 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
SPG21-210ENST00000559677 SLC27A3Q5K4L6 730 aa12.48□□□□□ -0.41
SPG21-210ENST00000559677 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
SPG21-210ENST00000559677 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
SPG21-210ENST00000559677 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
SPG21-210ENST00000559677 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
SPG21-210ENST00000559677 ZBTB7AO95365 584 aa12.47□□□□□ -0.41
SPG21-210ENST00000559677 KCNQ4P56696 695 aa12.47□□□□□ -0.41
SPG21-210ENST00000559677 FAM208AQ9UK61 1670 aaKnown RBP12.46□□□□□ -0.41
SPG21-210ENST00000559677 CYP27B1O15528 508 aa12.46□□□□□ -0.41
SPG21-210ENST00000559677 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
SPG21-210ENST00000559677 MPRIPQ6WCQ1 1025 aa12.46□□□□□ -0.41
SPG21-210ENST00000559677 LRP5O75197 1615 aa12.45□□□□□ -0.42
SPG21-210ENST00000559677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.42
SPG21-210ENST00000559677 MEGF6O75095 1541 aa12.45□□□□□ -0.42
SPG21-210ENST00000559677 MYOM1P52179 1685 aa12.45□□□□□ -0.42
SPG21-210ENST00000559677 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
SPG21-210ENST00000559677 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
SPG21-210ENST00000559677 RGPD3A6NKT7 1758 aaPredicted RBP12.44□□□□□ -0.42
SPG21-210ENST00000559677 RGPD4Q7Z3J3 1758 aa12.44□□□□□ -0.42
SPG21-210ENST00000559677 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
SPG21-210ENST00000559677 KIF7Q2M1P5 1343 aa12.43□□□□□ -0.42
SPG21-210ENST00000559677 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
SPG21-210ENST00000559677 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
SPG21-210ENST00000559677 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
SPG21-210ENST00000559677 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
SPG21-210ENST00000559677 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
SPG21-210ENST00000559677 MTFR1LQ9H019 292 aa12.43□□□□□ -0.42
SPG21-210ENST00000559677 TFCP2L1Q9NZI6 479 aa12.43□□□□□ -0.42
SPG21-210ENST00000559677 CCNL1Q9UK58 526 aaPredicted RBP12.43□□□□□ -0.42
SPG21-210ENST00000559677 BTAF1O14981 1849 aa12.43□□□□□ -0.42
SPG21-210ENST00000559677 PTGER2P43116 358 aa12.42□□□□□ -0.42
SPG21-210ENST00000559677 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
SPG21-210ENST00000559677 PLEKHO1Q53GL0 409 aaPredicted RBP12.41□□□□□ -0.42
SPG21-210ENST00000559677 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
SPG21-210ENST00000559677 PIGBQ92521 554 aa12.41□□□□□ -0.42
SPG21-210ENST00000559677 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
SPG21-210ENST00000559677 NSD2O96028 1365 aa12.41□□□□□ -0.42
SPG21-210ENST00000559677 PHKG2P15735 406 aa12.4□□□□□ -0.42
SPG21-210ENST00000559677 MTHFSP49914 203 aa12.4□□□□□ -0.42
SPG21-210ENST00000559677 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
SPG21-210ENST00000559677 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
SPG21-210ENST00000559677 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
SPG21-210ENST00000559677 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
SPG21-210ENST00000559677 CC2D1BQ5T0F9 858 aaKnown RBP12.39□□□□□ -0.43
SPG21-210ENST00000559677 ARXQ96QS3 562 aa12.39□□□□□ -0.43
SPG21-210ENST00000559677 SYT17Q9BSW7 474 aa12.39□□□□□ -0.43
SPG21-210ENST00000559677 IL13P35225 146 aa12.38□□□□□ -0.43
SPG21-210ENST00000559677 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
SPG21-210ENST00000559677 SULT6B1Q6IMI4 303 aa12.38□□□□□ -0.43
SPG21-210ENST00000559677 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
SPG21-210ENST00000559677 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
SPG21-210ENST00000559677 TMOD3Q9NYL9 352 aa12.38□□□□□ -0.43
SPG21-210ENST00000559677 PNPLA7Q6ZV29 1317 aa12.37□□□□□ -0.43
SPG21-210ENST00000559677 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
SPG21-210ENST00000559677 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms