RNA–Protein interactions for RNA: ENST00000559207.1

CPNE6-212, Transcript of copine 6, humanhuman

TSL 3

Gene CPNE6, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-212ENST00000559207 SYTL4Q96C24 671 aaPredicted RBP16.16■□□□□ 0.18
CPNE6-212ENST00000559207 PCGF6Q9BYE7 350 aa16.16■□□□□ 0.18
CPNE6-212ENST00000559207 MTFR1LQ9H019 292 aa16.16■□□□□ 0.18
CPNE6-212ENST00000559207 SGIP1Q9BQI5 828 aa16.15■□□□□ 0.18
CPNE6-212ENST00000559207 KCNQ4P56696 695 aa16.14■□□□□ 0.17
CPNE6-212ENST00000559207 SLC27A3Q5K4L6 730 aa16.14■□□□□ 0.17
CPNE6-212ENST00000559207 AKT1S1Q96B36 256 aa16.14■□□□□ 0.17
CPNE6-212ENST00000559207 MYOM1P52179 1685 aa16.14■□□□□ 0.17
CPNE6-212ENST00000559207 SHANK3Q9BYB0 1731 aa16.14■□□□□ 0.17
CPNE6-212ENST00000559207 INSRP06213 1382 aa16.13■□□□□ 0.17
CPNE6-212ENST00000559207 RAPGEF4Q8WZA2 1011 aa16.13■□□□□ 0.17
CPNE6-212ENST00000559207 NSD2O96028 1365 aa16.13■□□□□ 0.17
CPNE6-212ENST00000559207 NSD3Q9BZ95 1437 aa16.12■□□□□ 0.17
CPNE6-212ENST00000559207 FHDC1Q9C0D6 1143 aaPredicted RBP16.12■□□□□ 0.17
CPNE6-212ENST00000559207 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
CPNE6-212ENST00000559207 CLSPNQ9HAW4 1339 aa16.12■□□□□ 0.17
CPNE6-212ENST00000559207 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
CPNE6-212ENST00000559207 FLT4P35916 1363 aa16.12■□□□□ 0.17
CPNE6-212ENST00000559207 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
CPNE6-212ENST00000559207 SYT17Q9BSW7 474 aa16.11■□□□□ 0.17
CPNE6-212ENST00000559207 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
CPNE6-212ENST00000559207 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
CPNE6-212ENST00000559207 DOT1LQ8TEK3 1739 aa16.11■□□□□ 0.17
CPNE6-212ENST00000559207 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
CPNE6-212ENST00000559207 ARXQ96QS3 562 aa16.1■□□□□ 0.17
CPNE6-212ENST00000559207 PPM1GO15355 546 aaPredicted RBP16.08■□□□□ 0.16
CPNE6-212ENST00000559207 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.16
CPNE6-212ENST00000559207 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
CPNE6-212ENST00000559207 TFCP2L1Q9NZI6 479 aa16.07■□□□□ 0.16
CPNE6-212ENST00000559207 CCNL1Q9UK58 526 aaPredicted RBP16.07■□□□□ 0.16
CPNE6-212ENST00000559207 LY75O60449 1722 aa16.06■□□□□ 0.16
CPNE6-212ENST00000559207 PCDH11XQ9BZA7 1347 aa16.06■□□□□ 0.16
CPNE6-212ENST00000559207 PCDH11YQ9BZA8 1340 aa16.06■□□□□ 0.16
CPNE6-212ENST00000559207 CYP27B1O15528 508 aa16.06■□□□□ 0.16
CPNE6-212ENST00000559207 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
CPNE6-212ENST00000559207 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
CPNE6-212ENST00000559207 SENP3-EIF4A1A0A087X0R7 540 aa16.05■□□□□ 0.16
CPNE6-212ENST00000559207 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
CPNE6-212ENST00000559207 POLKQ9UBT6 870 aa16.04■□□□□ 0.16
CPNE6-212ENST00000559207 QSER1Q2KHR3 1735 aa16.04■□□□□ 0.16
CPNE6-212ENST00000559207 HSPA5P11021 654 aaKnown RBP16.03■□□□□ 0.16
CPNE6-212ENST00000559207 MPRIPQ6WCQ1 1025 aa16.03■□□□□ 0.16
CPNE6-212ENST00000559207 EYA1Q99502 592 aa16.03■□□□□ 0.16
CPNE6-212ENST00000559207 TUBGCP6Q96RT7 1819 aa16.03■□□□□ 0.16
CPNE6-212ENST00000559207 NCAPD2Q15021 1401 aa16.02■□□□□ 0.16
CPNE6-212ENST00000559207 MAP3K5Q99683 1374 aa16.02■□□□□ 0.16
CPNE6-212ENST00000559207 EIF4G2P78344 907 aaKnown RBP eCLIP16.02■□□□□ 0.16
CPNE6-212ENST00000559207 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
CPNE6-212ENST00000559207 POLD1P28340 1107 aa16.01■□□□□ 0.15
CPNE6-212ENST00000559207 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
CPNE6-212ENST00000559207 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
CPNE6-212ENST00000559207 ANKRD26Q9UPS8 1709 aa16.01■□□□□ 0.15
CPNE6-212ENST00000559207 NKX1-1Q15270 411 aaPredicted RBP16■□□□□ 0.15
CPNE6-212ENST00000559207 SPG7Q9UQ90 795 aa16■□□□□ 0.15
CPNE6-212ENST00000559207 UTRNP46939 3433 aa16■□□□□ 0.15
CPNE6-212ENST00000559207 PALLDQ8WX93 1383 aa16■□□□□ 0.15
CPNE6-212ENST00000559207 COL24A1Q17RW2 1714 aa15.99■□□□□ 0.15
CPNE6-212ENST00000559207 MSH5O43196 834 aa15.99■□□□□ 0.15
CPNE6-212ENST00000559207 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
CPNE6-212ENST00000559207 ZNF784Q8NCA9 323 aaPredicted RBP15.99■□□□□ 0.15
CPNE6-212ENST00000559207 CCER1Q8TC90 406 aaPredicted RBP15.99■□□□□ 0.15
CPNE6-212ENST00000559207 PIGBQ92521 554 aa15.99■□□□□ 0.15
CPNE6-212ENST00000559207 PANK3Q9H999 370 aa15.99■□□□□ 0.15
CPNE6-212ENST00000559207 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
CPNE6-212ENST00000559207 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
CPNE6-212ENST00000559207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
CPNE6-212ENST00000559207 TOGARAM1Q9Y4F4 1720 aa15.98■□□□□ 0.15
CPNE6-212ENST00000559207 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
CPNE6-212ENST00000559207 ITGB4P16144 1822 aa15.96■□□□□ 0.15
CPNE6-212ENST00000559207 NLGN2Q8NFZ4 835 aa15.96■□□□□ 0.15
CPNE6-212ENST00000559207 C5P01031 1676 aa15.95■□□□□ 0.14
CPNE6-212ENST00000559207 PHKG2P15735 406 aa15.95■□□□□ 0.14
CPNE6-212ENST00000559207 GPR162Q16538 588 aa15.95■□□□□ 0.14
CPNE6-212ENST00000559207 MSL1Q68DK7 614 aa15.95■□□□□ 0.14
CPNE6-212ENST00000559207 HMGB2P26583 209 aaKnown RBP15.94■□□□□ 0.14
CPNE6-212ENST00000559207 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
CPNE6-212ENST00000559207 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
CPNE6-212ENST00000559207 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
CPNE6-212ENST00000559207 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
CPNE6-212ENST00000559207 GOLGB1Q14789 3259 aaKnown RBP15.93■□□□□ 0.14
CPNE6-212ENST00000559207 SMIM5Q71RC9 77 aa15.93■□□□□ 0.14
CPNE6-212ENST00000559207 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
CPNE6-212ENST00000559207 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
CPNE6-212ENST00000559207 ASAP1Q9ULH1 1129 aa15.93■□□□□ 0.14
CPNE6-212ENST00000559207 IGSF1Q8N6C5 1336 aa15.93■□□□□ 0.14
CPNE6-212ENST00000559207 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
CPNE6-212ENST00000559207 SIK1P57059 783 aa15.92■□□□□ 0.14
CPNE6-212ENST00000559207 PELP1Q8IZL8 1130 aaKnown RBP15.92■□□□□ 0.14
CPNE6-212ENST00000559207 AK7Q96M32 723 aa15.92■□□□□ 0.14
CPNE6-212ENST00000559207 C4BP0C0L5 1744 aa15.91■□□□□ 0.14
CPNE6-212ENST00000559207 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
CPNE6-212ENST00000559207 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
CPNE6-212ENST00000559207 CHD4Q14839 1912 aa15.91■□□□□ 0.14
CPNE6-212ENST00000559207 ITPK1Q13572 414 aa15.9■□□□□ 0.14
CPNE6-212ENST00000559207 LINC00116Q8NCU8 138 aa15.9■□□□□ 0.14
CPNE6-212ENST00000559207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.89■□□□□ 0.13
CPNE6-212ENST00000559207 PHF14O94880 888 aa15.89■□□□□ 0.13
CPNE6-212ENST00000559207 PLEKHG2Q9H7P9 1386 aa15.88■□□□□ 0.13
CPNE6-212ENST00000559207 YBX3P16989 372 aaKnown RBP eCLIP15.88■□□□□ 0.13
CPNE6-212ENST00000559207 ATP6V1AP38606 617 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms